Pseudoliparis swirei (Mariana hadal snailfish): 130206969
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Entry
130206969 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130206969
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
130206969
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Motif
Other DBs
NCBI-GeneID:
130206969
NCBI-ProteinID:
XP_056291250
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Position
17:complement(14855411..14858211)
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AA seq
767 aa
AA seq
DB search
MANRVLSPNRIPRFEYLQYKSQHPELESSVVSSGMNSTSPLSGKCNEKEVMHGLNDRLAG
FVENVHHLEHQNHLLERDIGEIKGKARPASICKEEYGPELRKLRQLVQDITHQKHQIELE
HQHLEEELSKLRGQREQEARGRADAASNIVVLRRDINGAYQAKLQLDKKAQALVDEILFL
KGHHKAEVSEMFDQIQNAQVTVKAQAFGNPGVTAALRDVRAQLEGQTVSDVQQMGETFRS
QFARLTEAAERKSEAVKATQQEIQEHRRRLQAKNTELDCAQGTREALDTHLHDVEDHHKE
EIIHYQNTIKELENELINCQFDMSGYLRDYQDLLNVKMALDVEILSYRKLLCVEEARLST
MSDTHMSLPYIYHQSPVYTLPRLSRPGCRHRRAEPQYKFVEEIITETTREIEMSEFEEET
ASEETEMGKDEQQFTKRDRGIGSEEEKDNTDSGEEEGEQMPDREQNQVASVVNLVDDDDD
DDDETPGEVDDGKNGQTSKESEASEVVDKARPLCGTYTDTQSKVVLSESLNEEKHKQYQK
GSENTKEKKEAAGTMVEKDLSDLKPEVSGEDELLKKADCKKKKEMLRKSFISTRGNQPIS
ESPTHVCKESDTTRVRDKFPASEKDNYIAEATATLSVKTEQLSEKAQVSTSATSSSEDKE
KSHADPKGISQSEAAEGEDKVAKGIRDDTNKEPSLEVADQEPSSRNKTQTVQTVLPREKT
TVHSEVKELHQGPSKGSXAQKPERSESSEQIQDPQDXKVEESSKSEK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccgagtcctctcaccgaacaggatccctcggtttgagtatttacaatacaag
tcacaacatccggaattggaaagcagtgtcgtgtcctcgggcatgaattcaaccagcccg
ctatcagggaagtgtaacgagaaagaagtgatgcatggtttgaatgatcgtcttgcgggt
ttcgtagagaatgtgcaccacctggagcaccagaatcacctgctggagagagacattggg
gagatcaaggggaaagcccgacccgcatctatttgtaaggaggagtacggaccagagctt
aggaaactgagacagctggtccaggatatcactcatcagaagcaccagattgaactcgag
catcagcatttggaggaagagctgtccaaattgagaggacaacgtgaacaggaggcgcgt
ggcagagcggatgccgcgagcaacattgtggttctcaggagggacatcaacggcgcgtat
caggctaaactccagctggacaaaaaagcgcaggctctcgtggatgaaatcctcttcctg
aagggacaccacaaggccgaggtgtccgagatgtttgaccaaatccagaatgcgcaagtg
actgtcaaggcgcaagcatttggcaaccctggcgtcactgcggcactccgcgacgtcagg
gcacagctggaaggtcaaaccgtgtccgacgtccagcagatgggagaaactttccgatct
cagtttgcaagattaacggaggcagctgagcgcaagagcgaggcagtgaaagcgacccag
caagagattcaggagcacaggaggcgcctgcaggccaagaacaccgaactggactgtgcg
cagggcaccagagaagcgctggacacgcacctccatgacgtcgaggatcaccacaaggaa
gaaattattcactaccagaacacaatcaaagaacttgaaaacgagctcatcaattgccaa
tttgacatgtctggttacctgcgagattaccaggacctgttaaatgtgaagatggcgttg
gatgttgaaatactgtcttacaggaaacttctctgcgtcgaggaggctcggctatccacg
atgtccgacacccacatgtccctgccctacatctaccaccagtcccccgtctacaccctg
ccccgcctcagtcgaccgggatgccggcacagacgagccgagccgcagtacaagttcgta
gaggagatcataacggagaccaccagggaaattgagatgtccgaatttgaagaagagaca
gcatcggaggagacagagatgggaaaagatgagcagcagtttaccaaaagagatagaggg
ataggcagtgaggaagagaaggataatacagacagtggagaagaagaaggtgagcagatg
cctgatcgtgagcagaatcaagtagcgtcagtagtgaatttagtggacgatgatgatgat
gatgatgatgagacccctggtgaggtggatgatggtaaaaatggtcaaacaagtaaagag
tcagaggcgagtgaagtggttgataaggcccgccctctttgtggtacatatacagatact
cagagcaaagttgtgttaagtgagagcctgaatgaggaaaaacataagcaatatcaaaaa
ggatctgaaaacacgaaagaaaagaaggaagctgcagggacaatggttgagaaagatctc
tctgatttaaagccagaggtttctggggaggatgaacttctgaaaaaagctgattgtaaa
aaaaaaaaggagatgctgagaaagagttttatctcaactcgagggaatcagccgattagc
gagagccccacccacgtgtgtaaagaatcggacacgactcgagtgcgggataagttccct
gcttcagaaaaagacaattatatagcagaggccacggccactctgtccgtaaaaacagag
cagctctcagaaaaagctcaagtatctacaagtgcgacatcctcgagtgaggacaaagaa
aagagtcatgcagatccgaaaggaatcagtcaatctgaagctgcagagggggaggataaa
gtagcaaaaggcattcgagatgatacaaataaagagccttctcttgaagtggcggatcag
gagcctagcagtaggaataaaacccaaacagtccaaactgtgctgccgagggaaaagaca
accgtccattcagaagtcaaagagttgcatcaggggccatcgaaaggaagctaggctcag
aaaccagagcggtctgaaagttcagagcaaatacaggatcctcaagactgaaaggtggag
gagagtagtaagtcagagaaataa
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