Pseudoliparis swirei (Mariana hadal snailfish): 130206976
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Entry
130206976 CDS
T09868
Symbol
cdh31
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04371
Apelin signaling pathway
pswi04514
Cell adhesion molecules
pswi04520
Adherens junction
pswi05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130206976 (cdh31)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130206976 (cdh31)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130206976 (cdh31)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130206976 (cdh31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130206976 (cdh31)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130206976 (cdh31)
04090 CD molecules [BR:
pswi04090
]
130206976 (cdh31)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130206976 (cdh31)
Cell adhesion molecules [BR:
pswi04515
]
Cadherins
Major cadherins
130206976 (cdh31)
CD molecules [BR:
pswi04090
]
Proteins
130206976 (cdh31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
PT
Cadherin_2
TM_ErbB1
Big_13
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
130206976
NCBI-ProteinID:
XP_056291264
LinkDB
All DBs
Position
17:complement(4989657..5007608)
Genome browser
AA seq
986 aa
AA seq
DB search
MGAARVAVLGILFVAFQATTSVTSEEPKCVPGFKSHLLTFNVFRKHLRMGTRLGKVGFTD
CTNRTRFLFSTDNSHFAVQADGVVKVKRPTGIRGQLEFLIHYWDSQGRLMSLPVRVVHVE
HLHGNHHHRSEQHHGERSQPNHQPSHQPSHQPSHQPSHQPSHQPSHQPNHQPSHQHHDQH
HNQHRLEHNDQHRPQHNPQHHVQHHDQQHHYQQHHQHHHQHHHPTDVASANNTENATDGP
VPILLFPKKVAGLRRSKRDWVIPDIKVSENVRGPYPFKVSQIRSNEDKVKKIFYRISGPG
ASEDPVGLFTMDRNTGNLYVTQSLDREAKATYMFKAHAVSDGGGTSEEPMDIVVHVIDQN
DNKPIFTQDTFLGEVAEASPNGFEVIQVVATDLDEPNNDNSDIAYSILSQDPALPTDKLF
VINPVTGVIRVQASGLDREKYPKYTLIVQAADMMGTGSTVEAKVILTVTDSNDNAPAFVK
PSYEASVDENKLAAYMLMMTVTDGDEPLSPAWNAVFTIVSGDPGGHFSVRTGNNKQEGIL
STVKGLDFERSTVHTLMISVKNEVPFATPLATSTATVVVRVLDVNEAPAFDPMEKIVSKR
EDLAVDAEVVQYSAFDPDTARKQKVMYRVIRDPAGWLSVAKNTGLIKVKNPMDRESVFVK
DNKYTALIGAYDNDDVPATGTGTLIIQLEDVNDNAPTIEERSIKVCHKESVPQLLSVTDK
DGPGFAAPYSVSLQGMSKTNWTARMNGSKTGILLNLGIELESGEYTVVLRVADHQGQEQD
STVLATVCDCTGEDVICKGRVAGGTGLPLILGILGGILLLLMLVLLLLLFARRRKGEQKV
PLLQDDDIRDNIYYYDEEGGGEDDQDYDLGVLHRGLDNRPEVFRNDVVPNFMPAPQYRPR
PANPEEIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGGSDGGSLSSLNSSSSGDQDYN
CLNEWGPRFKKLADMYGGGEDDDDML
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcccgggtcgcggttttgggcattttattcgtcgcttttcaggccacaact
tccgtgacttctgaggagccaaaatgtgtccctggattcaagtctcacttgttgactttc
aatgtgttcaggaagcacctgaggatgggcacgagactgggaaaagtgggattcaccgac
tgcacaaaccgcacacgcttcctgttcagcactgataacagccacttcgcggtacaggca
gatggcgtagtgaaggtaaaaagaccgacgggtattcgtggacaactggagttccttatc
cactactgggattcacaagggcgcttaatgagtcttcctgtccgagtggtgcacgttgag
catctgcatgggaaccaccaccacagatctgagcaacaccatggagaacgcagtcagccg
aaccatcagccgagccatcagccgagccatcagccgagccatcagccgagccatcagccg
agccatcagccgagccatcagccgaaccatcagccgagccatcagcaccatgatcagcac
cataatcagcacaggcttgagcacaatgatcagcaccggcctcaacacaaccctcagcac
catgttcagcaccatgatcagcagcaccattatcagcagcaccatcagcaccaccatcag
caccaccaccccaccgacgtggcatctgctaataacacagagaatgcaacggatggaccg
gtgcccattctgctttttcccaagaaagttgccgggctgaggaggagtaagagagactgg
gttattcctgacataaaagtttctgagaatgtcagaggaccatacccttttaaagtatct
caaatccgttcaaacgaggataaagtgaagaagatcttttacaggatcagtggtccagga
gccagcgaggaccccgttggcctgttcaccatggaccgcaacactggtaatctgtacgtc
acacaatctctggacagggaagccaaggccacgtacatgtttaaagcgcatgccgtgtcg
gacggtggaggaacttcagaagagccgatggacattgtggtgcatgtcattgaccagaat
gacaacaaaccgatattcacccaagacaccttcctgggagaagttgccgaggcctcgcca
aatggtttcgaggtgattcaggtcgtggccacagatctcgacgagccaaataacgacaac
tccgacatcgcctacagtattttgagccaggatccagcgcttcccaccgacaagctgttt
gtcatcaacccggtcaccggagtcatcagagtccaagccagcgggctcgacagagagaaa
tacccaaagtacactctgatagttcaagcggctgacatgatgggaacagggtcgactgtg
gaagccaaagtgatcctgaccgtcacggatagcaacgacaacgcgccggccttcgttaag
ccgtcctatgaagcgtcggttgacgaaaataaattggccgcttatatgctgatgatgacg
gtgacggatggcgacgagccactgtccccggcttggaacgccgtcttcacgattgtcagc
ggtgatcccggaggacatttctccgtgagaactggaaacaacaaacaggagggaatcctt
tccaccgtcaagggtctcgacttcgagaggagcaccgtgcacactctcatgatctcagtg
aagaacgaggttccctttgctactcccctggccaccagcaccgccacggtggtggtgcgc
gtgctcgacgtcaacgaggcgccggcctttgatccaatggagaagatcgtgtcgaagcgg
gaggacctcgccgtggacgccgaagtggtgcagtacagcgcttttgacccggacaccgcg
cgcaaacagaaagtcatgtatcgagtaattcgagaccctgccggatggctgagtgtggcc
aaaaacaccggtctgattaaagtcaagaatcccatggacagggagtccgtctttgtcaag
gacaacaagtacacggcactcatcggtgcctatgacaacgatgatgtcccggccacagga
accggcactctgatcatccagctcgaagatgtcaatgacaatgcgcccaccattgaggaa
cggtcgatcaaggtgtgtcacaaggagtctgttcctcagctgctgtcggtaacggataaa
gatggaccgggctttgctgctccatacagcgtctcattacagggcatgtcgaagaccaac
tggaccgctaggatgaacggttccaaaacgggcatcctcctgaatttaggcatagagctg
gagagtggcgagtacacggtggtgctgagggtggcagaccaccagggccaggagcaggac
agcaccgtcctggccaccgtctgcgactgcaccggggaggacgtgatctgcaaaggccgt
gtggccggtggcaccgggctgccgttgatcctgggaatactgggaggcatcctgttgctg
ctcatgctggtgttgctgctgctgcttttcgcgagacgcaggaaaggagagcagaaggtt
cctctgctgcaggacgatgacatcagagacaacatctactactatgacgaagagggaggc
ggcgaggacgatcaggactatgatctgggagttctccaccgcggtctggacaaccggccc
gaagtgttcagaaacgacgtggtgcccaacttcatgccggctcctcagtaccggccccgc
cccgccaaccccgaggaaatcggcaacttcatcgacgataacctgaaggcggccgacaac
gacccgacggcgccgccctacgactccctgctggtgttcgactacgagggcggcggcggc
tccgacggcgggagcctctcgtccctgaactcgtcgagcagcggcgaccaggactacaac
tgcctcaacgaatggggaccgcgcttcaagaagctggccgacatgtacggaggcggagaa
gacgacgacgacatgctgtaa
DBGET
integrated database retrieval system
