Pseudoliparis swirei (Mariana hadal snailfish): 130206981
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Entry
130206981 CDS
T09868
Symbol
ppifa
Name
(RefSeq) peptidylprolyl isomerase Fa isoform X1
KO
K09565
peptidyl-prolyl isomerase F (cyclophilin D) [EC:
5.2.1.8
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130206981 (ppifa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pswi03110
]
130206981 (ppifa)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
130206981 (ppifa)
Chaperones and folding catalysts [BR:
pswi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
130206981 (ppifa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
130206981
NCBI-ProteinID:
XP_056291278
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Position
17:complement(15391302..15393421)
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AA seq
199 aa
AA seq
DB search
MLRIRYRVRYSTPGVVAARLFSSRPARNPVVFLDIEADSEPLGRITIELNADVVPKTAAN
FRALCTGEPGFGFKGSVFHRVIPEFMCQGGDFTNHNGTGGKSIYGKTFKDENFILKHTGP
GTLSMANSGPNTNGSQFFICTNKTEWLDGKHVVFGQVKDGMDVVTKMESFGLHDGGVIKT
ILITNSGEISQDHTRTSVG
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaatacggtaccgcgtgagatacagcacgccgggcgtcgtggccgcgaggctg
ttctcctcccgtcccgccaggaaccccgtcgtgttcctggacatcgaggccgacagcgag
cctctcgggaggataaccatcgagttgaatgcagatgtcgtgccaaagactgcagcaaac
ttccgcgcactgtgtacaggggaacctggctttggattcaagggatccgttttccaccgg
gtcatccctgagttcatgtgtcaggggggagatttcaccaaccacaacggcacaggaggg
aaatccatatatgggaagacattcaaagatgaaaacttcatattaaaacacactggtcca
ggaacactttcgatggcaaattcagggccaaacaccaacggctcccagttcttcatctgt
acgaataaaactgaatggctcgatggtaaacacgtggtgttcgggcaggtgaaggacggc
atggacgtggtcaccaagatggagtcttttggtttacatgacggcggtgtgattaaaacc
attctcatcaccaacagtggggagatctcccaagatcacacgaggacttctgtcggatga
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