Pseudoliparis swirei (Mariana hadal snailfish): 130206984
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Entry
130206984 CDS
T09868
Symbol
lhcgr
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04020
Calcium signaling pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130206984 (lhcgr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130206984 (lhcgr)
04081 Hormone signaling
130206984 (lhcgr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pswi04030
]
130206984 (lhcgr)
G protein-coupled receptors [BR:
pswi04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
130206984 (lhcgr)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
130206984
NCBI-ProteinID:
XP_056291289
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Position
17:complement(9770964..9782463)
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AA seq
675 aa
AA seq
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MAPQAVWLLVALCGVLNARSCRAYTCPAICRCRADTFQCSGDTQLASRARATSDRLWLMH
LPLKEVPTHAFKELIDIRVIEISQSNHITRINRHAFLSLHSLAQICLQNINSLRVIEKGA
FTDLPKLKYLSISNTGLIHFPDFTTISSLVPYLILEMSDNMSIDIIPANSFQGITEEYVV
MKLFRNSFKTIKSHAFNGTKLDTLILSDNLYLSEIEEDAFEGATGPSSLDVSSTALSSLP
TTGLRGVKFLKARFAFALKTLPPLESLAELQEAKLEYPSHCCAFKTWGQKQMESALKNIT
ELCNLSKTELELTADGEEDLTDYNNIEYSDLKSDCPQIPLVKCTPTPDEFNPCEDLLGFP
FLRWLTWIITVFAVIGNLAVLAMLLMSHHKLTISRFLMCNLAFADLCMGLYLMLIAFMDY
LAGDEYYNHATDWQTGPGCGIAGFLTVFASELSLYTLTVISLERWHTITNAMHVNKRLQM
HHMAVIMGAGWAFSLLVALLPLVGVSSYSKVSICLPMDIDALRSQVYVVAVLILNVVAFL
VVCSCYIGIYLIVHNPDHSTRHGDTKIAKRMAVLIFTDFVCMAPISFFAISAALCVPLIT
VSHSKILLIVFYPINSLCNPFLYTLFTRAFRKDVCQLLSRCGCCHANTDFYRSQTLAGFT
PQLDTNDSRQKTSVS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggctccccaggcggtctggctcctggtcgctctgtgcggtgtcctgaatgcgcgctcg
tgccgcgcgtacacctgtccggccatctgtcgctgccgcgccgacacgtttcagtgcagc
ggagacacccagctggcctctcgggcacgagcaacaagtgaccgactatggctcatgcat
ctgcccttgaaagaagtccccactcatgccttcaaggagctcatcgacattagagtaata
gagatctcccagagcaaccacatcacacggataaatagacacgccttcctctccctccac
agcctggcccaaatttgtttgcagaacatcaacagtctgagggttattgaaaaaggtgcc
ttcactgacctccccaagctgaaatatttgagcatctccaacacggggctaatacacttc
ccagacttcactacaatctcttccctggtgccatatcttatcctagaaatgtccgacaac
atgagcatcgacatcattcctgccaattctttccaaggtatcacggaggagtacgttgtc
atgaaactgttcagaaacagcttcaagacaatcaaatctcacgcattcaatggaaccaag
ctcgacacactgattttgagcgacaacttgtatctcagtgagatcgaagaagacgctttt
gaaggagccacaggtccgagttctctggatgtttcctccactgctctgagctcgctcccc
actaccggattgaggggggtgaagtttctgaaagccaggtttgcctttgctctgaagacc
ctccctccactggagagcctagctgagctgcaggaggccaaacttgagtaccccagccac
tgctgtgctttcaagacatggggccagaaacaaatggaaagtgccttaaagaacatcacc
gagttgtgtaatctcagcaagactgaattagagctcactgcagatggcgaggaggacctt
accgattacaacaacatagagtactctgacctgaaatcggattgtcctcaaatccccttg
gtgaagtgcacgccaacgccagatgaattcaacccctgtgaggacctgctgggctttccc
ttcctgcgctggctcacctggataatcaccgtgttcgctgtgatcggtaacctggctgtt
ctggcgatgctgctaatgagccaccacaaactaaccatttccaggttcctcatgtgtaac
ctggccttcgctgacctgtgcatgggtctctacctgatgctcattgccttcatggactac
ctcgccggtgacgagtactacaaccacgccacggattggcagacggggcccgggtgtggc
atcgcggggttcttgacagtgttcgccagcgagctgtcgttgtacacgctgactgtaatc
agcctcgagcgctggcacaccatcaccaacgccatgcatgtcaacaagaggctgcagatg
caccacatggcggtcatcatgggggcaggctgggccttctctctgctggtcgccctgctc
cctctggtgggggtcagcagctacagcaaagtgagcatctgtctgcccatggacatcgac
gcgctgcgctctcaggtgtacgtggtggctgtgctcatcctcaacgtcgtcgctttcctg
gtggtctgctcctgttacatcggcatatatctgattgttcacaacccagatcactccacc
cgtcatggcgacaccaagattgccaagcgcatggccgtgctcattttcacggactttgtg
tgcatggccccgatctccttcttcgccatctccgcagccctctgtgtgcccctcatcact
gtgtctcactcgaagatcctgctcatcgtgttttatcccatcaactccctctgcaaccct
ttcttgtacaccctcttcacgcgggctttcaggaaggacgtgtgccagctgctgagtcgc
tgcggctgctgccatgccaacacagacttctaccggtcacagactctggctggattcaca
cctcaactcgacacaaacgactcccgacagaaaacatcagtctcttag
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