Pseudoliparis swirei (Mariana hadal snailfish): 130207013
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Entry
130207013 CDS
T09868
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130207013
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pswi03009
]
130207013
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130207013
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130207013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
130207013
NCBI-ProteinID:
XP_056291352
LinkDB
All DBs
Position
2:complement(528129..546983)
Genome browser
AA seq
1012 aa
AA seq
DB search
MTSVQEPEVQLAQRLASNEKPVRAKAMKKLRKYIYVRSHVEAGGFNSEELLKLWKGLFYC
LWMQDKPLLQEELSNQISSLIHSFQDIDGQLLYLESFLQTFKREWTGIDRLRMDKFFQLV
RFMFRQTFEVLKRKNWDSSTIDRFLELLTAQLLQSGSGAPLGLQFHVLDIYMTELAAVGS
AELTADQNLIFIEPFCKTAARTKDRPLFSAICNSMLSTIIDQAPFAIEDLMKELKAAEDS
DSGQASEEDNDELNEKTSKPVDEKRRPMNGIASNEDEGNDSDDAELEESDSEVSCDGDAE
QVLQFDYAALADKLFELASRSSTPSRNRQRLYKIIKVLRDLNEGVFPQDEYPEEVSTDED
DDMFGSRKMMMKRGRGGGLIGDTDEGVPGAKKSKGAKKEADTKQSKDSGKGDNEPADLKD
DDEPADLTANENNNKKKKKKKRRKKKTKVVQNRDADGSEPGQTVAPAQCTIKETEAGPAC
DLEKEVLTQSSLTAVEVTEANTPEVQSETLLPSAVKRPPGAVAEESSRPGDDMHQSVKNG
ETCELKAVEPETTSEADASDKKGLKAELQADAQAETLPLNYDESAENNTATTPETDCPAP
AKQKKKMMVKVTVVVTEEEEDDGPASVPEKQTDSLAPCGEESKNIDLKGPPVEAQLEEVE
SQDAAAAPLAKKRKKKKSKQEDDGPASVPEKQTDSIAPCGENIDLKGTTVEAQLEEVESQ
DATAAPLAKKKKKKRKNKQEDESAVVQLNKKRKNNPNECPTSVADEAVEAEITVTTPAKK
TKKKSAVAPADVEDTSQSPVACIVDAELSSETQVVSSSVKPTKKKKRKIPVVFEYEADEL
EAASINGVAEEPAATKKSKPDSDVGQPSTPKKSQKKKAKASRGSESDFVTFQSNATVPTP
LFCKTRGGASTPLSSKKKTQSPKSESKKVTFGLKNNKTAEFRKMDRSLLVSPDGSLRVPF
DPKQKPKFGVLKSPPTPATRKTPKAVKKAVKKAGTKTPKTKTIRRPLAADFF
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcggttcaagagccggaggtgcagctcgcgcagagattagcctccaacgagaag
cccgtccgggccaaggccatgaagaagctgaggaagtacatatatgtcaggtctcacgtc
gaggcaggtggattcaacagcgaggagctgctcaagctgtggaagggtctgttctactgc
ctgtggatgcaggacaagccactgctccaggaggagctgtccaaccaaatctcttccctg
atccacagcttccaggatattgacggacaactgttgtacctggagagcttcctgcagacc
ttcaagagggagtggactggtatcgacaggctgcgcatggacaagttcttccagctggtt
cgcttcatgttcagacaaacgtttgaggtgctgaagaggaaaaactgggacagcagtacg
attgaccggttcctggagctgctgacggctcagctcctgcagagcggcagcggggctcca
ctcgggctgcagttccacgtcctggacatttacatgacggagctggcagccgtgggctca
gcggagctcacagctgatcagaacttgatcttcatcgagccgttctgcaaaacagcagca
aggaccaaagatcggcctctcttcagcgccatctgcaacagcatgctcagcaccattatt
gaccaggcccccttcgccatcgaagacctgatgaaagagttgaaggcagccgaggactct
gactccggacaggcgtccgaagaggacaacgacgagctgaacgagaagacgagcaaaccg
gtcgacgagaagaggcgaccgatgaacggcattgcctcaaatgaggacgagggtaatgat
agtgatgatgctgagctggaagagtccgacagcgaggtgtcgtgtgatggggatgccgaa
caagtcctccagtttgactacgccgccctggccgacaagttgtttgagttggccagtcgc
agcagcacgcccagcaggaaccgacagaggctctacaagatcatcaaagttctgcgtgac
ctgaatgaaggcgtctttcctcaggacgaataccccgaggaggtctccacggatgaagac
gacgacatgttcggcagcaggaagatgatgatgaagagaggaagaggagggggtctcatc
ggggataccgatgagggcgtgccaggagccaagaagagtaaaggggcgaagaaggaggcc
gacacaaagcaaagcaaggactcaggcaaaggtgacaatgaacccgctgacctgaaagat
gacgatgaacccgctgacctgactgcaaatgaaaacaacaacaagaagaagaagaagaaa
aagaggagaaagaagaagacgaaagtagtgcagaatagagatgcagacggatctgaacct
gggcagactgttgctccagcccaatgtacaatcaaagagactgaggcaggtccggcgtgt
gatttggaaaaggaagtactgacacaaagttccctcacagctgtagaagtgacggaggca
aatactccagaggtgcagtcagaaactctgctcccctctgcagtgaaacggcctccaggt
gctgtggcagaagaaagcagccgacccggtgacgacatgcaccaatctgtgaagaacggg
gagacctgtgagctcaaagccgtggagccagagacgacctccgaggccgacgcctcggac
aagaagggcctgaaggctgaactgcaggccgatgcacaggcagaaacccttccacttaat
tatgacgagtctgcagaaaacaacacggcaacgacacccgaaacggattgtccagcaccg
gccaagcagaagaagaaaatgatggtgaaagtcactgttgtggtcacagaagaagaggag
gatgatggccccgcctccgtaccggagaagcaaactgattcattagccccatgcggtgag
gagagtaagaacattgacctcaaaggaccaccggtggaggctcaactcgaagaagtcgaa
tcacaagacgccgccgcagcgccactcgcaaagaagaggaagaagaagaagagcaagcag
gaggatgatggccccgcctccgtaccggagaagcaaactgattcaatagccccatgcggt
gagaacattgacctcaaaggaacaacggttgaggctcaacttgaagaagttgaatcacaa
gacgccaccgcagcgccactcgcaaagaagaagaagaagaagaggaagaacaagcaggag
gatgagagcgctgtcgtccaattgaacaagaagaggaaaaataacccaaatgaatgtccg
acttcagtggcagatgaagctgtggaggctgagatcaccgtgacgacgccagcaaagaag
acgaaaaagaagtcggcggttgcccccgcggacgtggaagatacaagccagtcgccggtg
gcgtgcatagtcgatgcagaactctcgagtgaaacccaagtcgtctcctcctctgtgaaa
cccacaaagaagaagaagaggaagatcccagtggtgtttgagtacgaggccgatgagctg
gaggcggcatccatcaacggggtcgccgaggaacccgccgccaccaagaagtcaaagccc
gacagcgacgttgggcagccgtccactcctaaaaagtcccaaaaaaagaaggcgaaggct
tcccgggggtcggagtctgactttgtcacctttcaaagcaacgccaccgtcccaacgcca
ctcttctgcaaaaccagggggggagccagcacgccgctgtccagcaagaagaagactcaa
agtcccaaatccgagtccaagaaggtgaccttcgggctcaagaataacaagacggctgag
tttcgtaagatggaccgcagcctgctggtgagtccagacggctcgttacgagtgcccttt
gaccccaaacagaaacccaagttcggggtcttgaagtctccacccacacccgccaccaga
aagacccccaaggccgtcaagaaggccgtcaagaaggccggcaccaagactccaaagacc
aagacgatacgccgacccctggcggccgacttcttctag
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