Pseudoliparis swirei (Mariana hadal snailfish): 130207037
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Entry
130207037 CDS
T09868
Symbol
srbd1
Name
(RefSeq) S1 RNA-binding domain-containing protein 1 isoform X1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
S1
Tex_central_region
HHH_9
HHH_7
YqgF
RNase_II_C_S1
RuvX
HHH
Motif
Other DBs
NCBI-GeneID:
130207037
NCBI-ProteinID:
XP_056291400
LinkDB
All DBs
Position
17:16818190..16864686
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AA seq
1009 aa
AA seq
DB search
MMRRRETTAKAVENTDMDSDLSQATSSEEDNDEWRPTQPKPKAPSRAAKAPAAAGEKKAA
VKRTAKPKEPKPPKAPKVPKVPKPRAPRKPAAERKTQAPKVLRDPGAPAMLGVKRKNIDE
GEKDYTAAEKKEEKQTDCLKEERAEKSGPSSRMKSERVSFIVSDANQAGEGPSLAGLRAK
KEEVEDFTFDEPNQKKQKTSGACLGRSTLPSSEKKTQWNELNMSWDLIELVSTLTCVEKW
VCVNVIGLLREENTVPFMVRYRKELINHMDADAVRDVQLIYEELCSLAKKTQSVVQTLKK
DGTLTTELEQNLKSCRSADELDHVYAPYKKGSKLTKARRAKALGLEAAASALMDAPHTLD
LRGWVKPGTEGLSTIEEVTTGVEHILADMIAKDPETLTFMKTLCERRNVTIQSSVSKAAL
KEKEQKPVDAFKKPGAQQNKSKDIDKFHLYVDFSANIHRIQPHQTLAINRGESLKILTVK
VNVPDEVKNDFTWWCINNRWKPRTFAKDELRAVIMRAVEDSYKRLILPFFTRSYRTKLTS
AAEKESIAMFVRNIRQRLLVCPVRGCVIIGVDPGFRHGCKLAVLSPTSQILHTDVVYLHT
QSQKNEAEKLRHLILKYSCSKVVIGNGTACRETESVFADLISRRCFHPLDVSYCITSEAG
ASIYSVSPEAIKEMPDMDPNHRSAVSIGRRVQDPLAELVKIDPKHIGIGTYQHDVSAGGL
KTALDGVVQECVSFVGVDINICSETLMRHVAGLNAGRARSIADWREQNGPFVNREQLKLV
KGMGPKTYQQCAGFIRINPQTLLSAKSSPHPVPEKPAAKKGKKKTCVTMPTSVNPLDQTC
IHPESYVVAQSFLSLVGGSADQIGSAGLQQCVESKVGTSSVEKLAETLGTTPETLQLIID
GLTQPPGFDIRQNFGQADFKRGIVSMSDLRVGAVLTGRVDNTALFGAFVDIGVGRAGLIH
KSKITLNKLPVNQRRRSLALGPGERVEVRVLSVDQERGRISLDLIRILQ
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaaggcgcgaaacaactgccaaagctgtagagaacacagatatggactccgac
ttgtcccaggcaaccagtagtgaagaggataatgatgaatggaggccgacacagccaaag
cctaaagccccaagcagagcggccaaagctcctgcagcagccggggagaagaaagccgct
gtcaagagaactgcgaaaccaaaggagccaaaaccaccgaaagctcctaaagtgccaaaa
gttcctaaaccaagggccccacgcaaacctgcagcagagcgaaaaacacaggcccctaaa
gttctgagggatcctggtgcaccggcgatgcttggagtaaagaggaaaaatattgacgaa
ggagaaaaagattatacggctgcagaaaagaaagaagaaaaacaaacggactgtctcaaa
gaagagagggctgaaaagagtgggccaagtagcagaatgaagtcggagagggtgtcattt
attgtatcagatgccaatcaggcaggcgaggggccgtcactcgctggactaagagcaaag
aaagaggaagtggaggatttcacatttgacgagcccaatcaaaagaaacagaagaccagt
ggggcctgcttgggacgatcaactttaccatcctcggaaaagaaaacccaatggaatgaa
ctcaatatgagctgggatctaatagagctggtatctaccctgacgtgtgtggagaaatgg
gtgtgtgtaaatgtcattgggctgcttcgtgaggagaacacggtgccattcatggtgcgc
tatcgtaaagagctgataaatcatatggatgcggatgccgttcgagacgtccagctgata
tatgaggagctatgctctctagccaagaagacccagtctgtggtccagaccctgaaaaag
gacggtactttgacaactgagctggaacaaaatctgaagagctgccgatcagctgatgaa
ctggatcatgtgtatgctccctataagaaaggcagtaagctaacgaaggctcgcagagcc
aaagctctcggccttgaggcggccgcctctgcactcatggacgcaccacatactctggat
ttaaggggatgggtaaaacctggtactgaaggtctgtcaacgatagaagaagtaactaca
ggggtggagcatatcttggctgatatgatagccaaagaccccgagacactcaccttcatg
aaaacattgtgtgagagaaggaatgtgaccatacagtcttctgtgtccaaggcggcactg
aaagaaaaagagcagaaacctgtcgacgctttcaagaaaccaggagcgcagcaaaacaaa
tccaaggacattgacaagttccacctctacgtcgacttctctgccaacatccaccgcatc
cagccccatcagaccctggccattaaccgaggggagagtctgaagattttgacagtgaaa
gtgaacgttcccgacgaggtgaagaacgacttcacgtggtggtgcataaacaacaggtgg
aagccgaggacgtttgcaaaagacgagcttcgtgcagtcatcatgagagctgtagaggac
tcttataaaaggcttattctgcctttcttcacgaggagttacaggaccaagctgacaagt
gcagcagagaaggagtcgatcgccatgtttgtacgaaacatccgtcagcgcctgttggtg
tgtccagtaaggggctgtgtcatcatcggggtggaccctggctttagacatggctgtaag
ctggcagttctctcccccactagtcagattcttcatactgatgttgtctaccttcatact
caaagccagaaaaatgaagcagagaaactgcgccacctcattctgaaatacagctgttcc
aaggttgtcattggtaacggtacggcgtgccgtgagaccgagtccgtcttcgcagacctc
atctcgaggcgctgttttcaccctctggacgtgtcctactgtataaccagtgaggcaggg
gcatccatctacagtgtgagtcctgaggcgatcaaagagatgccagacatggaccccaac
cataggagtgcagtgtccattggaagacgtgtccaagatccactggctgagcttgtgaag
attgatcctaaacacattggcattggaacataccagcatgatgtgtcagcaggaggtctg
aagacggcattggacggcgtggtgcaggaatgtgtgagctttgtcggggtggacatcaac
atctgctccgagacgctcatgaggcatgtagcaggcctgaatgctggcagagcgcgaagt
attgcagattggagagagcagaatggtcccttcgtcaacagggagcaactcaaactggtc
aaaggcatgggacccaagacctaccagcagtgtgccggcttcattagaatcaacccgcaa
accctactcagcgccaaatcttcaccgcaccctgtcccagagaaaccagcagctaagaag
ggcaaaaagaagacttgcgtcaccatgccaacctcggttaaccccctggaccagacctgt
atacacccagagtcctacgttgtggcacagagctttctgtccctcgtgggtgggagtgca
gaccagatcgggagtgcaggcctgcaacagtgtgtggagagcaaggttgggaccagcagt
gtcgagaaactggccgagacactgggcaccacacccgagaccctccagctcatcatagac
ggcctcacgcagcctcctgggttcgacatcagacaaaatttcgggcaagcagactttaag
cgaggcattgtgtcgatgagcgatctgcgggtcggcgccgtgctgacgggccgggtggac
aacacggctctgttcggggcttttgtggatatcggcgttggccgcgcgggcctcatccac
aagagcaagatcaccctgaacaaactgccggtgaaccagcggcgccgcagcctggcgctg
ggacctggggagcgggtggaggtccgggttctgagcgtggaccaagagagggggcggatc
tcgctggacctgatcaggatcctgcaataa
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