Pseudoliparis swirei (Mariana hadal snailfish): 130207038
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Entry
130207038 CDS
T09868
Symbol
arid4b
Name
(RefSeq) AT-rich interactive domain-containing protein 4B isoform X1
KO
K19195
AT-rich interactive domain-containing protein 4B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130207038 (arid4b)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130207038 (arid4b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
ARID
130207038 (arid4b)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
130207038 (arid4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
Tudor_2
MSL3_chromo-like
PWWP
Tudor_5
Motif
Other DBs
NCBI-GeneID:
130207038
NCBI-ProteinID:
XP_056291404
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All DBs
Position
17:complement(7244490..7301476)
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AA seq
1323 aa
AA seq
DB search
MKTLDEPPYLTVGTDVSAKYRGAFCEAKIKMAKRLVKAKVTFKPDLTTAEVHDENIKGPL
KVGAVVEAKNQDGVYQEATINKLNDASIYTVVFDDGDEKTLRRSSLCLKGARHFAESETL
DRLPLTNPEHFGTPVIGKKGNRGRRSNPVQEEELSSSSSEEESNKRQNEDLFGKVVCVEG
VATGEKKKTTWYPALVISPDCHDDVTVKKDNIFVRSFKDGKFYTVIRKDVREMNSDFPPK
ADAGLKPALDAALEFLQQFVVPSSWKTEVKEESSSSEDEEEEEGQDEDASGEDEEEEVEP
FPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLYRLVHKLGGFDKIESGSIWKQ
VYQNLGIPVLNSAAGYNVKCAYRKYLNGFEEYCTSTAITFRMDLPLKQAPKVEVKSEGQA
GGAPVTSSSSEEQKVQVDGDPCSTQSIVCKDEKPDLSRNKTEPEPLITEEKDSGDDDEDN
DDNDDNEDLDPEEEGPLKGDADEGSSTARLGAENMKEERDEEQESKDNSGDDSSQEGEEG
EEFECYPPGMKVQVRYGRARNLKTYEATVKEADVEGGEVLYLVHYCGWNVRYDEWIKADK
IVRPANKNVPKIKHRKKIKNKAERERDRLERLNDREVLGPSPHANRLSRSKCGLSQDVFS
KMDEGEDKGTQQSPVKSIEITSILNGLQASEISTDESEHDDDDDDNNDEEGEHNEGDRPG
CRGSPRKAPPEPPQTSECLESGTPPEASKPSPGSGKSQESGVGSESADVGKRRSQPEFEG
EQSNRKRKSDGAAERTQKGHSTAKTRSTRSADWLPGASPRKMEERAACPGEERGASSSSS
SDDEDASLAESQAEESERSRPKPKGSSSKKYNGMKEKTKGGRPAGFWEIPEKRAKMAGNA
EERPAVRSKGQKDVWSSIQAQWPKQTLKELFSDSDTEAANSPPPPVPPCLEEPSIEQDAG
PEDEASEEQMENDKLQEFPSSGSNSVLNTPPTTPESPSGGGSVVEDSGPAQPSSSPPPSV
APVLPSEPVSDALPSGPRHEEAAGGRSETDSSTVEVESLGGELQDLPQDEGAGSPSKVFD
VSLSCNSSSSGSLELSSSSQLEIEQKSKASVSQKRQKEAQTSVPSKKHKPNRKSLGVPPK
KNRKTAVSSPPANSSDSEDQSVVEGTAKSTASKNSPPQVKAATSPKCHVRSPPSSHKYHK
QGDADHSQHRDNHGRSSRVYKWSFQMADLEKMSSLERISFLQEKLQDIRNHYLSLKSEVA
SIDRRRKRMKKKERESTVAASSSSSSSPSSSSLTAAVMLTLADPPVSSSSSSSQNSGVSV
ECR
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgaagactcttgacgagcccccctacttgacagtagggacggatgttagtgccaagtac
cgaggggctttctgtgaggccaagattaagatggccaagaggctagtcaaggccaaggtg
acctttaaaccagatctgaccacagctgaggttcatgatgaaaacatcaaaggacctcta
aaggtgggtgctgttgtcgaggctaagaatcaagatggagtttaccaggaggccacgatc
aataagctgaacgatgctagtatatatactgttgtgtttgacgatggcgacgagaagacc
ctgaggcgttcctctctctgcctgaaaggagcgcgtcactttgcagagagcgagacactc
gacagactccctctcaccaaccctgagcacttcggcacacctgtcatcggcaagaagggc
aaccgcggtagacgatcaaaccctgtccaagaagaagaattgtcttcatcgtccagcgaa
gaggagagcaacaagcggcagaatgaggatctgtttggcaaagtggtctgtgtggagggg
gtcgccaccggggaaaaaaagaagaccacgtggtatcctgctttggtcatctccccagac
tgccatgacgacgtgactgtgaagaaggacaacatcttcgtccgatcgttcaaggacgga
aaattctacacggtgatacggaaagacgtccgcgagatgaacagtgactttcctccaaaa
gccgacgcaggactcaaaccagcactggatgcagccttggagttcctgcagcagtttgtc
gtgccgagcagctggaagacagaagtgaaggaagaaagttcaagcagcgaggatgaggag
gaagaggaagggcaggatgaagatgccagtggtgaagatgaggaggaggaagtggagccg
ttccccgaggagcgggagaactttctacagcagctctacaagttcatggaggacagagga
actcccatcaacaaacggcctgtgttgggctacaggaacctgaacctgttcaagctctac
aggctggtgcacaaactgggaggcttcgacaagattgaaagcggctccatttggaagcaa
gtctatcagaacctgggaatcccggtgctcaactcagccgctggctacaatgtcaaatgt
gcttaccgcaagtacctcaatggatttgaggaatactgcacctccaccgccatcaccttc
cggatggacctccctttgaagcaggctcccaaggtggaggtgaagtctgagggccaggca
gggggagcacctgtcacctcctccagctcggaggagcagaaagtccaggtggatggagac
ccttgtagcacacagtctatcgtctgcaaggacgagaagccggatttgtcacgaaacaaa
acggaacctgaacccttaattactgaggagaaggacagcggggacgacgacgaggacaat
gacgacaatgacgacaatgaagacctcgaccccgaggaagaaggccccctcaagggagac
gcagacgagggctcgtcgacggcccgcctcggagcggagaacatgaaggaggagcgcgac
gaggagcaggagagcaaagacaactctggggatgacagcagtcaggagggggaggaaggg
gaggagtttgagtgttaccccccggggatgaaggtgcaggtgaggtacgggcgagcccgc
aatctgaagacgtacgaggccactgtgaaagaggcagacgtggaggggggagaggtgctc
tacctggtgcactactgtggctggaacgtcagatatgatgaatggatcaaggcagacaag
attgtgcgcccagccaataagaatgtaccaaaaataaagcaccgcaaaaagataaagaac
aaagctgagagggagagagacaggttggagaggctcaatgacagagaagtccttggccct
tcgccccacgctaaccgcctctcacgctccaagtgtggcctgagtcaggatgtcttttcc
aagatggacgagggtgaggacaaagggactcagcagtctccagtcaagtctatagaaatt
acttctatcctcaatggcctgcaagcctcggagatatccacagatgaaagtgagcacgac
gacgatgacgatgataataatgatgaggagggcgagcataacgagggagatcgccctggt
tgcagaggcagcccgagaaaggccccaccagagcccccgcaaacatcagagtgcttggag
agcgggacccctccggaagcatccaaaccgtctccaggctcaggaaagagccaggaatca
ggagtcggttcagagagcgcagatgttgggaagcgcagaagccaaccggagtttgaagga
gagcagagcaacaggaagagaaaatctgacggtgcagcggagaggacccagaaaggccac
tctacagcgaagacccggagcaccaggagtgccgactggctgcctggagcctctcccagg
aaaatggaggagagagctgcttgtcccggggaggagaggggggcctcgtccagcagcagt
tcagatgacgaggatgcatcactggccgagtcccaagcggaggaaagtgagcgaagccgg
ccaaaacccaaaggttcatcttccaagaagtacaacgggatgaaggagaagaccaaaggt
ggcagaccagctggattctgggagattcctgaaaagagggccaaaatggctgggaacgcc
gaggaaaggccagctgtccgctctaaaggccaaaaggatgtgtggtccagcatccaggcc
caatggccgaagcagactcttaaagagttgttctctgactcagacaccgaggccgccaat
tctcctcctccgcctgtgcccccgtgtctggaggagccgagtatcgaacaggatgctgga
cctgaggacgaagcctccgaggagcagatggagaacgacaaactgcaggagtttccaagc
agtggcagtaactctgtactcaacacaccaccaacaacgcccgagtcgccctcaggggga
ggcagtgttgtggaagactccggtccagcgcagccctcctcctccccgccgccgtccgta
gcgcccgtcttgccttcagagccggtttctgacgctcttccctcaggaccgaggcacgag
gaagcggcaggcgggcgcagtgagacggacagcagcacagtggaagtggagagtctgggc
ggggagctgcaagacctccctcaggatgagggggcaggttccccctcgaaggtgttcgac
gtcagcctctcctgcaacagcagcagcagcggcagtctagagctgagcagcagcagccaa
ctggagatcgagcagaagtccaaagcctctgtgagtcagaagcggcagaaggaagcacag
acaagtgtaccctcgaagaaacacaagccaaaccgcaagagcctcggtgtgcctcccaaa
aagaataggaaaacggctgtctcttctcctccagccaacagcagtgacagtgaagaccag
tctgttgttgagggcactgccaaatcaactgcctcaaagaacagccccccacaggtgaag
gctgccacttcgcccaagtgtcacgtacgatctcccccttcgagccataagtaccacaag
cagggtgacgccgaccacagccagcaccgagacaaccatggaagatcgtcacgcgtgtac
aagtggagcttccagatggctgacctggaaaagatgagcagtctggagagaatttcgttc
cttcaggagaagctgcaggacatcaggaaccactacctctccctcaagtccgaggtggcc
tccatcgacagacggcggaaacgcatgaagaagaaggaacgggaaagcacagtggcggct
tcctcttcgtcctcctcgtccccgtcctccagctcactgactgcggcagtcatgctgacg
ctggctgacccgccggtgtcatcctcatcgtcctcttcgcagaactctggggtgtcagtg
gagtgcaggtga
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