Pseudoliparis swirei (Mariana hadal snailfish): 130207049
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Entry
130207049 CDS
T09868
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pswi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
130207049
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130207049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130207049
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130207049
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130207049
NCBI-ProteinID:
XP_056291416
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All DBs
Position
17:complement(22675084..22684812)
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AA seq
459 aa
AA seq
DB search
MNASQAPRLLAWLLALLAGPVFCSEQETQLVKKLFTGYNKVVRPVNHFSEAVVVTVGLQL
IQLISVDEVNQIVTSNVRVKQQWLDVNLNWNPDEYGGIRKIRVPSTDIWKPDLVLYNNAD
GDFAIIHQTKVLLEHSGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGLLVI
INPDSDRPDLSNFMESGEWVLKDYRSWKHWVYYTCCPDTPYLDITYHFLMLRLPLYFIVN
VIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKY
MLFTMVFVIASIIITVIVINTHHRSPSTHTMPGWIRKVFIETIPNMMFFSTMKRPGQEIR
QKRMFPTDMDISDISGNPAPTSITYQSPITRNPDVRSAIEGVKYIAETMKSDEESNNAAE
EWKFVAMVLDHILLCVFMAVCIIGTLGVFAGRLIELNTL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcctctcaggccccgaggctgctggcctggctcctcgccctgctggccggtccg
gtgttctgctcggagcaggagacccagctggtgaagaagcttttcaccggctacaacaag
gtggtccgacccgtgaaccacttcagcgaagccgtggtggtcaccgtgggactgcagctg
atccagctcatcagtgtggatgaagtgaatcagatcgtgacgagcaacgttcgtgtgaaa
cagcaatggctggacgtgaatctgaactggaacccagacgaatacggaggaatccggaag
atcagagtcccgtcaaccgacatctggaaaccagacctggtgctatacaacaacgctgac
ggagacttcgccatcatccaccagacgaaggtcctgttggagcacagcgggatgatcacc
tggaatcctccggccatcttcaagagctactgcgagatcatcgtcctccatttccccttc
gacctgcagaactgcagcatgaagctgggcacctggacctacgacgggctgctggtcatc
atcaaccccgacagcgatcgtcccgacctcagcaacttcatggagtcgggtgaatgggtg
ctgaaggactaccggagctggaaacactgggtgtactacacctgctgccccgacacgccg
tacctggacatcacgtaccacttcctgatgctgcggctgccgctctacttcatcgtcaac
gtcatcatcccctgcatgctgttctcctttctcaccggactggtcttctacctgcccacc
gactccggcgaaaagatgacgctctccatctccgtgctgctgtccctgaccgtcttcctg
ctggtcatcgtggagctcatcccctccacctccagcgccgtgcccctcatcgggaaatac
atgctcttcaccatggtgttcgtcatcgcctccatcatcatcaccgtcatcgtcatcaac
acgcaccaccgctcgcccagcacccacaccatgcccggctggatacgcaaggtgttcatc
gaaaccattcccaacatgatgttcttctccacgatgaagcgtcccggtcaggagatccgg
cagaagaggatgttccccaccgacatggacatctccgacatctcaggtaaccccgccccc
accagcatcacctaccagtctcccatcaccaggaacccggacgtccgcagcgccatcgaa
ggggtgaagtacatcgctgagaccatgaagtcagacgaggaatcgaacaacgcagcggag
gagtggaagttcgtggccatggttctggaccacatcctgctctgcgtcttcatggccgtg
tgcatcatcgggacgctcggcgtcttcgccgggaggctcatcgagctcaacacgctgtag
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