Pseudoliparis swirei (Mariana hadal snailfish): 130207055
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Entry
130207055 CDS
T09868
Symbol
slitrk5b
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130207055 (slitrk5b)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
Orf78
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
130207055
NCBI-ProteinID:
XP_056291433
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Position
2:complement(7636011..7638614)
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AA seq
867 aa
AA seq
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MHLWISYVLLSAMSVRTVEMFDSYGEICQRLCACEEREGILTVSCENRGVVSISDISPVY
FSQYHLLLTGNHLKTLSADDFVEYKGLTILHLGNNYISEIEAGAFNGLRGLKRLHLNNNK
IDALKEEFFFGLESLEYLQIDSNYITHVAPKTLSRLRNLEVLILNDNLISRLPVNIFQYV
PLTHLDLRGNQLKVLPYSGLLEHMNSVVELQLEENPWNCSCELIALKSWLESISYTALVG
DVVCEFPFRLHGRDVDEVSKQELCPRRAIAEYEMPPLPRAITDAYHRTVPALVTASFTSS
GIARSSSRPTKGPRQSGKLKSKPTARIPSNKPQHYGQIISYQTKSPVPLDCPTACTCNLQ
ISDLGLNVNCQERKIEFISDLNPKPYNPKKMYFTGNYIPVVRRSDFIEATGLDLLHLGNN
RVSRIHDRTFADLTHLRRLYLNGNLIDHLSADMFYGLENLQFLYLEYNVIKKVSSDTFQH
VPKLQLLFLNNNLLKTLPVGTLNGLTLARLNLRNNHLRYLPVSGVLDQLTALVQVDLFEN
PWDCSCSILELKMWLEQLSTGTVVNNVICGSPTRLAGEDMRYIKTTNLCPNNSDILAFMI
PPSEESFPGSTITIETTLDSDTQYSAIPLSVMILALLFIFIVSVFVAAGFFVVMKKRHQK
SQNEHNNSMNACISSLNMEYGLYKKGSIPKVRTSAGHLYEYVPPPTETTCRTTDQTPTDS
KSVDGFQDFDELSGVYLAHSDEEATSNVISSEYSVTAPEPLNKPSNHHQEDQCYYRDVLE
SDKHTCYSNSLPCRHAGHSSSQYASDFDARHRYMHPDRIQQTLFYCASPSTVYVEPNRSE
YWELKAKLHIDPDYLEVLEKRTTFTQF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttggatttcatatgttttgctcagtgcaatgtcagtgagaactgtcgagatg
tttgacagttatggagaaatatgtcaacgactgtgtgcctgtgaggagagagaggggata
ctcacagtgagctgtgaaaacagaggagttgtaagtatctcagacatcagccccgtgtac
ttctcccagtatcatctgctgctgacagggaatcatttaaaaacgctatctgccgatgat
tttgttgagtacaaaggacttacaatattacatctgggaaataattacatatcggagatt
gaagcaggagcttttaatggacttcggggattaaaacgattgcatctcaacaataacaaa
attgatgccttgaaggaagagtttttctttggcctggaaagtctggaatatctccaaatt
gattctaattatataactcatgtggccccgaaaaccttgagcagacttcgaaatctggag
gtcctgattctcaatgataacttaatatctcgtctgccggtgaacattttccagtatgtc
ccactgactcatttggatttacgagggaatcagctcaaagtgctcccctactcaggtctg
ctggagcacatgaacagtgtcgtggagttacagctggaggagaacccgtggaactgttcg
tgtgagctgattgcacttaagtcctggctcgagagcatatcgtacacagctttagtcggc
gatgttgtttgtgagttccctttccggcttcatgggagagacgttgatgaggtttcaaaa
caggagttgtgcccaaggagagccatcgctgaatacgagatgccacccctgccacgtgcg
attaccgacgcataccacaggaccgtaccggctctggtcacagcctccttcacctcttct
gggattgctcggtcctcatcaagacccacgaagggacctcgccagtcgggcaaattaaaa
tcaaagcccactgctcgcatcccatcgaataaaccacaacattatggacaaattatttca
tatcaaaccaagtcccccgtgcctttagattgcccaactgcctgcacctgcaatcttcaa
atttcagacctcggcctgaatgtgaactgccaggagagaaagattgaatttatctctgac
ttaaatcccaaaccatacaatcccaaaaagatgtattttacagggaattatatcccagtt
gtgcgtcgatctgattttatcgaggcgactgggttagatctgcttcatctcggtaacaat
cgagtatctcgcatacatgaccgaacttttgccgatttgacacatctaagaagactatac
ctgaatggtaatttgattgatcatctatcagctgacatgttttatggactggagaatcta
cagttcttatatttagaatacaacgtcattaaaaaggtcagttctgacacctttcagcac
gtacccaaacttcagcttctttttctgaacaataacctcttgaaaacgttacccgtggga
acacttaatggcctgacattagccaggctaaatcttcgcaacaaccatttgcgatatctt
cccgtcagcggcgtgctagatcaacttacagcactggtgcaagtcgatttgttcgagaat
ccctgggattgctcttgtagcatactggagttaaagatgtggctggagcagcttagcaca
ggcacagttgtaaacaacgtcatctgtggttcgcccaccaggctagctggggaggatatg
agatacattaagacaacaaatctttgcccgaataattctgatatacttgccttcatgatc
ccaccctctgaagaatctttccctggcagcactatcaccatagaaacaactttggactct
gacacgcaatacagcgccattcctttatctgtgatgattcttgcccttctctttatattc
attgtgtctgtttttgtggctgcaggatttttcgtggtcatgaaaaagcgccatcaaaag
agtcaaaacgagcataataactccatgaatgcttgcattagctctctcaacatggaatat
ggcctttacaaaaagggatctattcccaaagtcaggacatctgctggacatttatacgag
tacgtcccacctcccacagaaaccacatgcagaacaactgaccagaccccaacggacagc
aaatcagtggatggatttcaagactttgatgagttgagcggcgtttatctggctcactcg
gatgaagaggcgaccagtaatgttataagctcggaatacagcgtgaccgctccagagccc
cttaataagccctccaaccatcaccaagaggaccagtgttactatagagatgtacttgag
tctgacaagcacacatgctacagcaattcgttaccatgcaggcatgcgggacattcgtca
agtcagtatgcctcagactttgatgcaaggcatcgatacatgcatccagatagaatacaa
cagacactattctattgtgcatcaccaagtacagtgtatgtggagcccaacaggagtgag
tactgggaactaaaagcaaagcttcatattgatcccgattacctggaggttcttgaaaaa
cgaacaacatttacacagttttaa
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