Pseudoliparis swirei (Mariana hadal snailfish): 130207100
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Entry
130207100 CDS
T09868
Symbol
lmbrd1
Name
(RefSeq) lysosomal cobalamin transport escort protein LMBD1
KO
K14617
LMBR1 domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04977
Vitamin digestion and absorption
pswi04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
130207100 (lmbrd1)
04980 Cobalamin transport and metabolism
130207100 (lmbrd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130207100 (lmbrd1)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
130207100 (lmbrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Wbp11
Motif
Other DBs
NCBI-GeneID:
130207100
NCBI-ProteinID:
XP_056291517
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Position
17:11061951..11115608
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AA seq
540 aa
AA seq
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MADQQLLAESALGWSIFTCILLVILAFCWVYIRKFQSRQESEVVSTITAICALAIALITS
ALLPVDIFLVSFMKYPNGTYKEWAANNETRGQIEGTVLYGYYTLYSIILFCVFLWIPFVY
FYYEERDDDNVNRCSQVKNALKYTVGFAIVCVVLLLIGAFVPLELPPGQNSTQWEKVQYL
FEELGSSHGLPALSFSISSLTLIGMLAVITYTAYGMSVLPLNLIKGTRSVKYERLENTED
IDDVEQQIEKLKSKCIDGRPLSSRDRNNLHELEGKLQVLQRKGRHLEIAERNCCTKVGSA
LRPFKILLGIFFILIALLFTVALFISNLDKALHSAGISSGFIIFGTNLTNPLNELLLALQ
PVFPLDYILITVITMYFVVTSMAGIRNMGIWFFWMRLYKIRPKKTRPQALLFLCMILLLI
VLHTSYMIYSLAPQYVMYGSQKYLVQSQMPSAGSTSGNATFATTRTCDADAPEDQCTVTR
SYLFLHKFWFFSTIYYFGNWAFIGAFLIGLVVSCCRGKKSVIEGEVEADDSDFSDDEYVH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagcagttgctcgccgagtcggcgctcggctggtctattttcacctgtata
cttctggtaatccttgccttctgttgggtctacattcggaaatttcaaagtcggcaggag
agtgaagttgtttcaactatcactgcaatatgtgccctcgccattgctttgataacttca
gcacttctaccagtggatatattcctcgtctcattcatgaagtatcccaatggtacctat
aaggaatgggcagcaaacaacgagacaagagggcaaattgaaggcactgtgctgtatggt
tattacacactttactccatcatactattctgtgtcttcctatggatcccctttgtttat
ttctactatgaagaaagggatgacgataacgtgaacagatgctcgcaagtgaagaacgct
ctgaaatacacagttggatttgccattgtctgtgtcgtgctccttttaattggagctttt
gttccacttgagctgccacctggtcagaattccacccagtgggaaaaagtacaatacctt
tttgaagaacttggaagtagtcatggtctacctgctctatctttctccatcagctccttg
accttgattggcatgttggcagtgatcacttacacggcatacggtatgtctgtgctgcct
ttgaatctgataaaaggcacacggagcgtgaagtatgaacgcctggagaacacagaggac
attgatgatgttgagcagcagatagagaagctgaagtccaagtgtatagatggacgtccc
ctctcctccagggacagaaacaacttgcatgagcttgagggcaaactgcaggtcctccag
cgcaaggggagacacctggaaattgccgagaggaactgctgcactaaagtgggcagtgcg
ctccgaccgttcaagatattgctgggcattttctttatcctcattgcactgctgttcacg
gttgccttgttcatttcaaatttggataaagctctccactctgcgggcatcagctctggg
ttcataatctttggcaccaacctaactaatcctctgaatgaacttcttttagccttacaa
cccgtctttccattggactacatcctcatcacagtcatcaccatgtactttgtagtcact
tccatggctggcattcgcaacatgggcatctggttcttctggatgaggctgtacaaaatc
agacctaagaaaactcgcccccaggctcttctcttcctctgtatgattcttctcttgatt
gtcctgcacaccagctacatgatctacagcctcgccccacaatatgttatgtacggcagc
cagaaatatcttgtacagagtcagatgccctcagctggttctacatctgggaatgctact
tttgccaccacaaggacctgtgatgctgatgcgcctgaggaccagtgcactgtgacaaga
tcctatcttttcctccacaagttctggttcttcagcaccatctattactttggtaactgg
gcctttatcggggctttcctcattggcctggtggtgtcctgctgcagagggaagaagtct
gtgattgaaggagaggtggaggctgatgactccgacttcagtgatgatgaatatgtgcac
tga
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