Pseudoliparis swirei (Mariana hadal snailfish): 130207114
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Entry
130207114 CDS
T09868
Symbol
ebf3b
Name
(RefSeq) transcription factor COE3 isoform X1
KO
K09103
early B-cell factor
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130207114 (ebf3b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130207114 (ebf3b)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
130207114
NCBI-ProteinID:
XP_056291538
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Position
17:complement(20089310..20159307)
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AA seq
574 aa
AA seq
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MFGIQETIPRSGTTMKEEPLGGLNSVRSWMHTAGVVDANTAAQSGVGLARAHYEKQPPSN
LRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKDKEPTSEKTNNGIHYKLQLLYSSGVR
TEQDLYIRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPV
IIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTCNVDGHVLAVSDNMFVHNNSKHG
RRARRLDPSEAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITPH
AIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHPG
DPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPSLANTA
SHGMMGVNSFSSQLAVNVSESQGNDQVGYSRNTSSVSPRGYISSSTPQQSGYNSVSNSMN
GYGNAGMNLGVPSSPGFLNGSSANSPYGIKQKSAFAPVVRPQASPPPSCTSANGNGLQGE
PPSPPHPFPTDYWSDTAAQASVRFAMSGLVVPPM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaattcaggaaactataccgcggagcgggacgacgatgaaggaggaaccgctc
ggtggactgaactcggtccgctcctggatgcacacagctggggtggtggatgcaaacaca
gccgcccaaagcggtgtcggcttggcacgggcacattatgaaaagcagcccccttccaac
ctcagaaaatccaattttttccatttcgtgctggcgctgtatgacaggcagggtcagccc
gtggagatcgaaaggacagcttttgtggactttgtggagaaagacaaagaaccaaccagt
gaaaaaactaacaatgggatacattacaaactacagttattgtacagcagtggcgtccga
acagaacaggatctttacattcggctaatcgattccatgacgaagcaggccataatttat
gagggtcaagacaagaatccagaaatgtgcagagttcttcttacccatgaaattatgtgc
agccgatgctgtgacaagaaaagctgtggaaacaggaacgagaccccgtcagaccctgtg
atcattgacagattcttcctcaagttcttcctcaagtgcaatcagaactgtctgaagaat
gcagggaatccccgagacatgcgcagattccaggttgtcgtatcgacgacctgcaatgtg
gacggccatgtcctggccgtttctgacaacatgttcgtacacaacaattccaagcacggg
cgaagggctcgcagactcgacccttcagaagcagccaccccgtgcatcaaagccatcagc
ccgagtgagggatggaccaccggaggagccactgtcatcatcataggggacaacttcttc
gacggcctccaagtcgtgttcggcaccatgctcgtatggagtgagctgatcactccacac
gccatccgtgtccagactccacctcggcacatccccggagttgtggaagtcacgctgtcc
tacaagtcaaagcagttctgcaaaggtgcccctgggagatttgtctatactgccctaaat
gagccaaccatcgactatggtttccagaggctgcagaaggtcatccccagacaccccggc
gatcccgagaggttaccaaaggaggtgctactgaagagggcggctgatctcgttgaagcc
ctgtatggaatgccccacaacaatcaggagatcattctgaagagggcagctgacatcgcc
gaggccctgtacagcgttccccgcaaccacaaccagatcccctctctcgctaacacagcc
tcccacggcatgatgggagtcaactccttcagcagccagctagcagtcaatgtgtctgag
tcacaagggaatgaccaagtgggctacagccggaacaccagcagcgtgtccccccggggc
tacatctccagcagcaccccgcagcagtcgggctacaactccgttagcaacagcatgaat
ggctacggcaacgccggcatgaacctgggagtgccgagctcccctgggttcctcaacgga
tcctctgccaactccccatatggaattaaacaaaagagcgccttcgcccctgtggtccga
ccccaggcctccccacccccctcctgcaccagcgccaacggcaacggactgcaaggtgag
cccccctcaccccctcatcccttccccacggactactggtcagataccgctgctcaggcc
tctgtccggtttgccatgtccggtctggttgtccctccaatgtaa
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