KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130207119
Entry
130207119         CDS       T09868                                 
Name
(RefSeq) striatin-like isoform X1
  KO
K17608  striatin 1/3/4
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pswi01009]
    130207119
Protein phosphatases and associated proteins [BR:pswi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     130207119
SSDB
Motif
Pfam: WD40 Striatin Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_EML NBCH_WD40 ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_ACSF4 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_SPT8 Prp19 SOGA1-2-like_CC
Other DBs
NCBI-GeneID: 130207119
NCBI-ProteinID: XP_056291547
LinkDB
Position
17:complement(7027538..7056361)
AA seq 780 aa
MDEQAGPGVFFNNNNNSVLTGGGKEPLPDGDAGEAARAQYSIPGILHFLQHEWARFEVER
AQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYGTELNQ
GDMKPPTYDSDEANENESSGSLTNQLSWKQGRQLLRQYLQEVGYTDTILDVKSQRVRALL
GLAGDGGGKTGERTSTEPLLNGTDASKALGTRGKAELSDSSAVLEAFNFIENAAADFSDD
DDDEDSEGRDRANVSRTILRKRPTSSTTPASMDTSEDPDTEEALKGFDFLSSPDEMDTSP
ESRGNGDGTDWEKDEQGPISEAWEVDPGMITKLKEQYRKERKGKKGVKRPNRSKLQDMLA
NLREAEDLSHMQPPPSAPQSRPSAVRFNEHDGNRPDEVEALTFPPTSGKSFIMGADEAME
SELGLGELAGLTVANEADSLAYDIGNNQDALRKTWNPKFTLRSHFDGIRALAFHPVEPVL
VTASEDHTLKMWNLQKTAPAKKSASLDVEPIYTFRAHRGAVLSVAMSSSGEQCFSGGVDG
TIQCWNTPNPNIDPYDSYDPSMRRGTLFGHTDSVWGLVYSSAHQRLLSCSADGTVRLWDA
NTTSPALAVFNKDKKLGVPSSVDLVCSEPAHLVTSFTNGQLGLFDMETRQLVLSLESNLE
PGTPCQINKALSHPTLPITITAQEDRHIKFFDNNSGKLIHSMVAHLDAVTSLAVDPNGLY
LMSGSHDCSIRLWNLESKTCIQEFTVHRKKFEESIHDVAFHPSKCYIASAGADALAKVFV
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggacgagcaggcggggcccggcgtgttcttcaacaacaacaacaactccgttttaacc
ggcggtgggaaggaaccgctgcccgatggcgacgccggggaggcggctcgagcgcagtac
agtatcccggggatcctgcacttcctgcagcacgaatgggcccgtttcgaagtggagcga
gcacaatgggaggtggagcgggccgaattacaggcccagatcgccttcctgcagggggag
aggaaaggccaggagaacttgaagaaagaccttgtgaggaggatcaaaatgctggagtac
gctctgaagcaagagagagcaaagtaccacaagttaaaatatgggaccgagttgaatcaa
ggtgacatgaagccgccgacctacgactctgatgaggccaacgagaacgagtcctccgga
tcgctcaccaatcagctgtcctggaaacaaggacgtcagctcctcagacagtacctgcag
gaggtgggctacacagacaccatcttagacgtaaagtcccagcgggtccgagcgctgcta
ggactagccggggacggaggcggaaagacgggggaacggaccagtactgagcctttgctc
aatgggacagacgcatcaaaggcattgggcaccagagggaaagctgagctctctgacagt
agcgctgtactggaggccttcaatttcatcgagaatgcagcagctgatttcagtgatgat
gatgatgatgaggacagcgaggggagggaccgggccaacgtgtccagaacgatcctgagg
aagaggcccacgtcgtcaacaacgccggccagtatggacaccagtgaagaccctgacaca
gaggaggcactgaagggctttgactttctgtccagtcctgatgagatggacacctcgcca
gagtccagaggcaacggggacggcacagactgggagaaggacgagcaaggtcccatttct
gaggcctgggaggtggacccgggcatgataaccaaactcaaggagcagtacagaaaggag
cgcaaggggaaaaagggggtgaagaggccaaaccggtccaagctgcaggacatgctggct
aacttgagagaagcagaggacctgtcccacatgcagcctccaccatccgccccccagtcc
cggcccagcgcggtccggttcaacgagcacgatgggaaccgacccgatgaagttgaggcg
ctgaccttcccgcccacctcagggaagtcgttcattatgggcgcagacgaggccatggag
agtgagctgggcctgggggagctggccggactcactgtggccaacgaggccgacagtctg
gcgtacgatattggcaacaatcaggatgccctgagaaaaacatggaaccccaaattcacc
ctgcggagccattttgatgggattcgcgctctggcctttcaccctgtggagcccgtcctg
gtcactgcctcagaggatcacacgctcaagatgtggaacctgcaaaagacggctcctgcc
aaaaagagcgcatctttagatgtggaaccaatctacactttcagagcccacaggggcgca
gtactgagtgtggcgatgagcagttcaggggagcagtgtttcagcggtggggtagacggg
accatacagtgctggaacacccccaatcccaacatcgacccctacgactcctacgatcca
tcgatgcggcgcggcacgttgtttggacacaccgactccgtctggggtttggtgtacagc
agcgcacaccagcgcctcctctcctgctcggcagacgggaccgtgagactgtgggacgcc
aacaccacgtcccccgccctcgcagtattcaacaaagacaaaaagctcggagttccgtcc
tcggtggacctggtgtgcagtgaaccggcccacctggtcacatccttcacaaacgggcag
cttggcctcttcgacatggagacccgccagctggtcctcagcctcgagtccaatctggag
ccgggcactccgtgtcagatcaataaggccctcagccacccgactcttcctatcaccatc
actgcacaagaggacagacacatcaagttctttgacaacaacagcgggaagctgattcac
tccatggtggcccacctcgatgctgtcaccagcctagctgtcgaccctaatggactctat
ctcatgtcaggcagtcacgactgctcaatccgcctgtggaaccttgagagtaaaacctgc
atccaggagttcacggttcacaggaaaaagtttgaggagtcgatccacgatgtggcgttt
catccgtctaagtgctacatcgccagcgctggagcggacgctctcgccaaagtgttcgta
tga

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