Pseudoliparis swirei (Mariana hadal snailfish): 130207145
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Entry
130207145 CDS
T09868
Symbol
sema4ga
Name
(RefSeq) semaphorin-4G
KO
K06521
semaphorin 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pswi04090
]
130207145 (sema4ga)
CD molecules [BR:
pswi04090
]
Proteins
130207145 (sema4ga)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Ig_3
I-set
Ig_2
ig
Motif
Other DBs
NCBI-GeneID:
130207145
NCBI-ProteinID:
XP_056291594
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Position
17:complement(13878346..13901101)
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AA seq
898 aa
AA seq
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MRRSAEMQGCCAVRLLLLCCCVCAAASYPFRTPLDLDVTPRVTVLNSGLQGCRRFQSSAV
SYSTMLLEADSERLFVGARGAVFALNASDISASSALTIEWEASPEQKLQCLLKGKDNKTE
CFNHIRFLQRFNSTHLYMCGTHAFSPLCAYINEDTFVMSSQPEEGRDKCPYSPTTGYTAL
IIDQQMYSASQYEFRSFPDIRRNSPPPTLKTEDAPTRWLNEADFVGSALVRESLGSSTGD
DDKIYYFFTERSEEQTTTYSHSRVARVARICKGDRGGRLTLQKRWTSFLKARLTCSLPEY
DFHFNMLRSMFVMPGLTPQDTLFYGIFGLEWKNVKASAVCRFSLSEVQEAFQGPYMENQD
SGSKWKEYTGKIPDPRPGTCITDTLRAKGINVSTSLPDDVLNFVRRHPLMSRQVQPSDRR
PLLFRRTTDYTHMAVNMIEGLDGHTYHVLYMGTDEGWLHKAVEIQGQLHIIEELQLFEEP
QPVINLLLSAKQMSVYVGSPSGVVQLPLARCHRYASCYDCIFARDPHCAWNGAQCVDVMA
QADRSSLVQDIQQGSKGCENTQDDVAVRSRSVRVGDDVLLQCELSSNLATPLWTLDGSEL
QGYGLNSGFRTGTDGLLIIEARRDQSGLYTCFAVENNIKVAIVTFNITIRLDLPPPPPVE
PTADPYSLFVTLLAPTEHSSPERPPPPAPLLPHSELLSPRNMEAIYLSLITILGGLCVVL
TVVLVYVGFCLRVGNRGKYSLRAAAASAYPNGKRPNRNKKHHRNSSLMELKTISSHCNGN
GVCNGVSKQHNGDIQEGGFLQIVPGEAHRSPNKELPPPAPPLPPTPQHPSPECDFPNGLS
ATLPSVLRRMKGNSYVLLRQSESESTPPLCYSFAEELNKMLEKRKRTQLLPRPDESSV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctcggcagagatgcagggatgttgtgcggtgcggctcctgctgctgtgctgc
tgtgtgtgtgcggcagccagctacccgttcagaacgcccctggacctggatgtgactcca
cgcgtcaccgtgttgaacagcggtctccagggctgcagacgtttccagtcctctgcagtc
agctacagcaccatgttgctggaggctgacagtgagcgtctcttcgtgggggcccggggg
gctgtgtttgctctcaatgcctctgacatttcagccagctctgctctcactattgaatgg
gaagcctcccccgagcaaaagctccagtgtctgctcaagggaaaagacaataagacggag
tgttttaatcacatccgcttcctccagaggttcaactcgactcatctctacatgtgtggg
actcatgccttcagccccctatgtgcttacataaatgaggatacatttgtgatgtcgtct
cagcctgaagagggcagagacaaatgtccctacagcccgacgacaggctacactgctctc
atcattgaccagcagatgtattcggcttcccagtacgagtttaggagctttcccgatatc
cgccgcaactctccgccccccacactgaagacagaggatgccccaacacgctggctgaac
gaggcagactttgtgggctcggcactcgtgagggagagtttgggcagcagcaccggcgat
gatgataagatctactacttcttcaccgagaggagcgaagagcagacgacaacctacagc
cacagcagggtggcacgagtggctcgcatttgtaagggggaccggggaggccgtttaact
ctccagaaacggtggacgtccttcctcaaggccaggctgacatgttctctgcccgagtac
gacttccacttcaacatgctgcgcagcatgtttgtcatgcctggccttacgccgcaggac
acgctcttctacggcatcttcggcctggaatggaaaaacgtgaaggcatctgcagtgtgt
cgattctctctgtctgaagtccaagaggcctttcaaggaccctacatggagaaccaggac
tctggctccaagtggaaggaatacactggaaagatccctgacccgcgacctggaacgtgt
ataactgacacactgagggccaagggcatcaacgtctccacctcgctgcccgatgatgtg
ctgaacttcgtccggaggcatcctctgatgtcccggcaggtccaaccttcagacagacga
ccgcttttgttcaggcggacgaccgactacacacacatggccgtcaacatgatcgaaggc
ttagatggacacacataccacgtgttgtacatgggcacagatgaaggctggttacataaa
gctgtagaaatccagggtcagcttcacattatcgaggagcttcaactgtttgaggaacca
cagcctgtaatcaacctgctgctgtcggcaaaacagatgagtgtatatgtgggctctcca
tcgggcgtggtgcagcttcccctcgctcgctgtcacagatacgcctcctgctacgactgc
atctttgccagagatcctcactgtgcctggaacggagcccagtgtgtggacgtcatggct
caagcagacagatcctctttagtccaggacatccagcagggcagcaaaggatgtgaaaac
acacaagatgacgttgccgtgcggagccgctctgtgcgggtgggcgacgacgtgctgctg
cagtgtgagctcagctcaaacctggcgacgcccctctggactctggatggcagcgagctg
cagggctacggcctcaactctggcttcaggactggcacagacggcctgctgattatcgag
gcccggcgggaccagagtgggctgtacacctgcttcgctgtcgagaacaatatcaaggtc
gccatagtaaccttcaatatcaccatccgcctggacctgccccctcctccacctgttgag
ccaacagcagacccttacagtttgtttgtcaccctgctagcccccactgagcactcctct
cccgagaggccaccgcccccggcccctcttctcccacactcagagctgctctcccccagg
aacatggaggccatatatctgtccctcatcaccatcctcggaggcctgtgtgtcgtcctc
actgtcgtgctcgtctacgtgggcttctgcctgcgagtgggcaacagagggaagtattca
ttacgagctgctgctgcttcagcctacccgaacggtaagaggcccaacaggaacaaaaaa
catcacagaaactcctccctcatggagctgaagaccatctcaagccactgcaacggcaat
ggcgtttgtaatggagtttcaaagcagcacaacggcgacatccaggagggaggcttcctc
cagatcgtccccggagaggctcacaggtcacccaataaggagcttcctcccccggcacct
cctctcccaccaactccgcaacatccctccccagagtgtgacttccccaacgggttatcg
gccacgctgcccagcgtcctgcggaggatgaagggcaacagctacgtgctgctgaggcag
agcgagtctgaaagcacgccgccgctctgctactcctttgccgaggagctgaacaagatg
ttagagaaaaggaaacgcactcagctgctgcctcggccggacgagagctctgtgtag
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