Pseudoliparis swirei (Mariana hadal snailfish): 130207156
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Entry
130207156 CDS
T09868
Symbol
myofl
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130207156 (myofl)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
Ferlins
130207156 (myofl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Motif
Other DBs
NCBI-GeneID:
130207156
NCBI-ProteinID:
XP_056291608
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All DBs
Position
17:14056818..14075808
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AA seq
2051 aa
AA seq
DB search
MLRVIVESASGISKKKIGKPDPIAAIIFRGEKKKTKAIDNELNPVWNEVLEFDLKGSSLD
ASSFINVVVKDYETIGKDKFIGSAKIPLRDLASGHMRSLPSKNVPLINEKQQAIGATINL
LIGYDPPADSTINLNEQPDGDTSHVDAGDSDEGDERETDVEEGGQTGSPGAPTSPNQSGK
ASHKPVCLSRKRHRALANKPQDFQIRIRVIEGRQLPGNNIKPVVKVNVCGQTHRTRLRRG
NNPFFNEMFFYNINMLPSELFDESISLRVYDSFSLRADSLIGDFKLDVGYIYDESGHAIM
RKWLLLSDPDDSISGARGYLKVSITVVGTGDDPPTEGKDISEEKDDIESNLLVPAGVTMR
WATLSLKVYRAEDMPQMDDAFIQTIKQVFGGDGDRKNLVDPYVEISFAGKKLCTKVLEKN
ANPEWNQLINLQVKFPSMCERVKLTIYDWDRLTKDDAIGSTFLNLSKMSSSGGEIEDARA
DSHTVSDLSKAASEVGFLPAFGPCYVNLYGSLREFTGLSDPFEELNFGKGEGVAYRGRVL
VELSTQLDGKADKNVDDISSDDILVAQKYQRRRKFSLCAVFHSACMLQEPGEPIQFEVSI
GNYGNKLDSTCKPLSSTTQYSVAVFDGNHYYYLPWADTKPVVILTSYWEDISHRLDSVNV
LLFIAERLESHLTSLKTAMLAKVSETRLAEIWLKLINHMIEDLNSFQLPVLEGQPNVTAL
DLQLKNLRDVAVDAIREMANRVREEATDVKATVGDIEDWLDRIKQLAEEPQNSMPDVIIW
MLRGEKRVAFARVPANQILFSNFSEQACGKHCGRTQTIFMQYPMDKNKGVKVPVQLRLNM
WLGLSADEKKFNSFSEGNFSVYAEMYENQAHVLAKWGTTGLVGRHKFSDVTGKVKLKRER
FLPPRGWDWEDDWLVDPERCLLTEADAGHTEFTDEVFRNETRFPGGEWKAATEPYTDVNG
ETVQSPEEFECPPGWRWEDDWSFDRDRAVDEKGWEYGVTIPPNDKPKSWVATEKMYHVHR
RKRLIRPRTKISDQMTVAEREPGEGWEYSSLIGWKFHRKERSSDTFRRRRWRRKMVPSDC
IGSSAIFRLEGALGVDVDEKASKTDAAKLFGANTPTVSCHFSQSHLYHLRVYVYQARNLC
AMDKDSFSDPYAHVSFLHVSKTTEVIRSTLNPTWDQTLIFENIEIHGDPQTIARNPPDVV
LELYDSDQVGRDEPLGRCTCPPVVKLNPSVAVSPKLLWFPVTKKGCIAGEVLLAAELLLK
NKVNDEDMPLVPPRRGEKLYMVPQGIRPVVQLTAIEVLTWGLRNMKTYQLATVSSPSLIV
ECGGEIVQTAVVKNFKKNPNFPGSVLLLKVLLPKEEMYTPPIVLKVIDHRPFGRKPVVGQ
CTINCLERFRCDPYRINSEVCMSARVAMIAAAQGDVVIDIEERPIVKAELQAEMEEEAVD
WWSKFFASVEEQVKCGPYLEKGYDTLQVFNGELEEVAHFQGFTDFCSTFKLQRGKTEHDE
DDPSVVGEFKGSFKIYPLSDDPGVTAPPRQFRELPESGPQECLVRIYVVRCLDLQPKDTN
GMCDPYVKIALGRKTLDDRDNYKPNTLNPEFGRMFEMSCFLPQDKDLKISVYDYDLLSRD
EKVGETVIDLENRLLSRFRSCCGLPQTYCVSGINQWRDQQKPSQILQNVARVRGVPPPRI
EEDGSSLSFSEKQHNLQDFEANTVIHPHLGSARERLALHVLRNQGLVPEHVETRTLCSSH
QPNLSQGKIQMWVDIFPKSLGLPGPPCDITPRKAKKYVLRAVIWNTTDVTLDERSVTGEE
MSDIYVKGWMPGMEDNKQKTDVHYRSLDGDAHFNWRFIFGFDYLPAEQLCVISRKEHFWN
LDNTEFRIPPKLIIQIWDNDKFSLDDYLGTVELDILNLISPAKSPEKCSLKMLPGIAGSV
ASKKPLPNSLFSQKSVRGWWPCMIEQDGKHVLGGKVEMTLEIVEDKEMEEKPAGKGRDEP
NMNPRLDQPNRPDMSFFWFTNPCKTMKFIVWRRFKWIFLAAILLLLVLLFLGILFYSLPN
YISMKIVKPFS
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcgtaattgtggagtcagctagtgggatttccaaaaagaaaattggaaaacca
gatccgatcgctgcgattatcttcagaggtgaaaagaagaaaaccaaagcaattgacaat
gaattgaatcctgtatggaacgaagtgcttgaatttgatctgaaaggctcttccttggat
gcatcttcattcatcaacgtggttgtcaaagactatgagacaattggaaaagacaagttc
attggctcagcaaaaatccctctgagagacttggccagtggtcacatgagatccctccca
tcaaagaatgtgcccttgatcaatgagaaacaacaggctattggggcaaccatcaatttg
ctcattgggtatgatccaccagccgactctactataaacctaaatgagcaacctgatgga
gacacgtctcatgtggatgcaggagacagtgatgagggcgatgagagggagacggatgtg
gaggaaggaggtcagactggaagcccaggagctcctacttccccaaaccagtcagggaaa
gccagccacaagccagtctgcctcagccgtaagaggcatagagccttggccaataagcct
caggacttccagattcgtattcgggttatcgagggtcgacagttgcctggcaacaacatc
aagccagtggttaaggtgaatgtatgcggacagacgcacaggaccagactcagaagagga
aataacccattcttcaacgagatgtttttctacaacataaacatgctcccttcagagctg
tttgacgagagcattagtcttcgggtttatgactccttctccctcagagctgacagtcta
ataggagacttcaagctggatgttggctacatctatgatgaatcaggtcatgccataatg
aggaaatggctcctcctgagtgatcctgatgactctatctcaggggctagaggttacctg
aaagtcagcataactgttgtgggcactggagatgacccaccgactgaggggaaagatata
agtgaggagaaagacgacatagaaagcaatcttttggtgccagctggtgtcacaatgcga
tgggccacactcagcctcaaagtctaccgggccgaggatatgcctcagatggatgatgcc
tttattcagacgataaaacaggtctttggaggggatggagacagaaaaaacttggtggat
ccatacgtggaaatcagctttgctggcaagaagctgtgcaccaaagtccttgagaaaaat
gctaatccggagtggaatcagctcatcaatctccaagtcaagttcccatccatgtgtgaa
cgcgtaaagttgactatatatgactgggatcgtctaactaaggatgacgccatcggatca
acgtttctaaacctaagcaaaatgtcttcctctggtggagagattgaagacgcacgagct
gatagccacacagtgtctgacttgagcaaggcagcatcagaggttggttttctcccagct
tttgggccttgctatgtcaacctgtacggtagcctgagagaatttaccggcctgtccgac
ccatttgaggaactcaactttggaaagggtgaaggggtcgcctacagggggagggtcctt
gttgagctgtccactcagctggatgggaaggctgataagaatgtggatgacatctccagt
gatgacatcctagtggcacagaaataccagcggaggaggaagttctctctgtgcgctgtg
ttccacagtgcgtgcatgctccaggagccgggcgagccaatccagtttgaggttagcatt
ggtaactatggtaacaagctggactccacctgcaagcccctgtcgtccaccacccaatac
agcgttgctgtgtttgatggtaatcactactattacctgccctgggccgacacgaagccc
gtagtgattctcacttcatactgggaagacattagccaccgtctggactctgtcaacgtt
ctcctcttcatcgctgagagactggagtcccacctcacctctttaaaaaccgccatgtta
gccaaggtgtctgagacacgtctggcagagatttggctcaaactcatcaaccacatgatt
gaggacctgaacagttttcagctcccagtgctagagggccaacccaatgtgactgcattg
gatctccagttgaaaaacctgcgtgatgtcgccgtggacgctatcagagagatggccaat
cgcgtgagagaggaggccacagatgtcaaggctactgttggtgacattgaggattggttg
gacagaatcaagcagctggcagaagagcctcaaaacagcatgccagatgtgatcatctgg
atgttaagaggagagaaacgagtggcttttgcccgagtgccagcaaaccagatcctgttt
tcaaactttagcgaacaggcttgtggcaaacactgtggacggacccagaccattttcatg
cagtatcccatggacaaaaacaaaggtgtgaaggttcctgttcagctgcggctcaacatg
tggctcggtctctctgccgatgagaagaagttcaacagcttctcggagggaaacttcagc
gtgtatgctgaaatgtatgagaaccaggcccatgtgttggcgaagtggggaactaccggt
ctggttggtcgtcataagttctccgatgtgactggaaaagtgaaactcaaacgagagcgc
tttctgccaccccgtggatgggattgggaggacgactggttggttgacccagagcgatgc
ctgttgacagaagcagacgcgggccacacggagttcacagatgaagtttttcggaatgaa
acacgtttccctggtggggagtggaaggccgcgactgagccctacacagacgtgaatgga
gaaacggttcaaagcccagaagaatttgagtgtccacctggatggagatgggaagatgac
tggagctttgacagagacagagctgtggatgagaaaggttgggaatacggagtcaccatt
cctcccaatgataagcccaaatcatgggttgcaacagagaaaatgtatcatgtccaccgc
aggaagagactcattagaccacgaacaaagatatctgatcaaatgactgttgccgagcga
gaaccaggggaaggctgggaatactcttccctgattggctggaagtttcacaggaaggaa
cgttcctctgacacgttccgtcgccgccgctggagaagaaagatggtcccgtcagactgc
atcggttcctccgccatcttcaggctggaaggggcattaggggtcgatgttgatgagaag
gccagtaaaacggatgcagccaaactatttggcgccaacacacccactgtttcctgccac
tttagccagtctcacctttaccatctgagagtgtacgtgtatcaggcgaggaatctctgt
gccatggacaaagacagcttctcagatccctacgctcatgtgtcattcctacatgtgagt
aagactactgaagtcataaggtccaccctgaaccccacatgggatcagactctcatcttt
gaaaacattgaaatccacggagacccacaaactattgcccgcaaccctcctgacgtggtg
ttggagctgtacgacagtgatcaagtaggtagagatgaacccctgggtcgctgcacatgc
cctccagtagtgaaactgaaccccagtgtggctgtcagccctaaactgctgtggttcccg
gtcaccaaaaaaggttgcattgctggggaggtactgctggctgcagagctcttgctgaag
aacaaggttaatgatgaagatatgcccctggtgcctcctcgccggggggagaagctctac
atggttccgcagggaatcaggcctgtagtgcagctcactgcgattgaggtcttgacttgg
ggcttgaggaatatgaagacctaccagttggccaccgtttcctcccccagtttgatcgtg
gagtgtggtggtgagattgttcaaaccgctgtggtcaagaacttcaaaaagaaccccaac
ttccctggatctgtgctgctgctcaaagtgcttctgcccaaagaggagatgtacacccct
cctattgtgctgaaggtaatcgaccacaggccttttggtaggaaaccagtcgtgggtcag
tgcaccatcaactgcttggagaggttccgctgtgatccgtatcgcattaacagtgaagtc
tgcatgtctgcgagagtggcaatgatagctgctgcccagggagatgtcgtcatagacatt
gaggagagacccatcgtaaaagctgagcttcaagccgaaatggaggaggaagccgtagac
tggtggagtaagttctttgcctctgttgaagaacaggtaaaatgtggtccttacctggaa
aagggatacgacacattacaagtgtttaacggtgaactcgaagaggttgcacacttccag
ggattcacagatttctgcagcactttcaaacttcagcgaggaaagactgaacatgacgaa
gatgatccctctgtggtgggagagtttaagggctcattcaagatttacccactgtctgat
gacccaggggtgacagctccaccccgccagttcagagagcttcctgagagcggacctcag
gagtgcctggtcagaatatatgtggtgcgttgtcttgacctgcagccgaaggatacgaat
ggcatgtgtgacccatatgtgaagattgcactgggaaggaaaacactggatgacagagat
aactacaaaccaaacacccttaacccagagttcgggaggatgtttgagatgtcctgcttc
ctgcctcaagacaaggacctgaagatttctgtatatgactatgacttactgagcagagat
gaaaaagtaggagagacagtcatcgatttggagaatagactcctgtctcgtttcaggtcc
tgctgtggcctgccacagacttactgtgtctcagggatcaatcagtggagagaccagcag
aagccttctcagatcctccagaacgtggccagagtgagaggcgttcctcctccacgcatc
gaggaagatggcagctccttgtcgttctctgaaaaacaacacaacctgcaagattttgag
gcaaacactgtgatccacccacacttaggctcggccagagagaggctggctctgcatgtc
ctcagaaaccagggcttggtaccagagcatgtggagaccagaaccctgtgcagctcccac
caaccgaacttatctcagggaaaaattcaaatgtgggtggacatttttcccaagagcctt
ggtttaccggggcccccatgtgatatcacgccacgcaaagccaagaagtacgttttgcga
gccgtcatttggaacacaactgatgttactctggacgaaagaagcgtcactggagaagag
atgagtgacatctacgttaaaggctggatgccaggtatggaggacaacaagcagaagacc
gatgtccactacagatccctggatggtgatgcacatttcaactggaggttcatctttggg
tttgactacctgcctgcagagcagctgtgtgttatctccaggaaagaacacttttggaat
ctggacaacactgaatttaggattcctcctaaattgatcatccagatttgggacaatgac
aaattctccttggatgactacttaggtacagttgaactggacattctcaatctgatctct
cctgctaagagcccagaaaagtgcagtctgaagatgttgcctgggatcgccggctcagtc
gcctccaaaaaacctctgcccaactcccttttctcccaaaagtctgtcagaggctggtgg
ccatgcatgatcgaacaggatgggaaacatgtgcttggtggtaaagtagagatgacgctg
gaaatagtggaggacaaggagatggaagagaaacctgctgggaaaggcagagatgagcca
aacatgaatcccagacttgaccaacccaaccgccctgacatgtcattcttctggtttaca
aacccttgcaagaccatgaagttcattgtttggcgcagattcaaatggattttccttgca
gcgattcttcttctgctggtcctcttgttccttgggatcctgttctactccctaccaaac
tacatctcaatgaagattgtgaagccgttctcctaa
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