Pseudoliparis swirei (Mariana hadal snailfish): 130207167
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Entry
130207167 CDS
T09868
Symbol
rrbp1a
Name
(RefSeq) ribosome-binding protein 1a isoform X1
KO
K14000
ribosome-binding protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130207167 (rrbp1a)
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GFIT
Motif
Pfam:
Rib_recp_KP_reg
GAS
LMBR1
ABC_export
Motif
Other DBs
NCBI-GeneID:
130207167
NCBI-ProteinID:
XP_056291621
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Position
17:9142593..9157886
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AA seq
1230 aa
AA seq
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MDIYDPQTLGVMVFGGFMVVSALGIALVSTFSMKETSYEEALAKQRRELGKIQSTRSDKK
KKDKATEKKTRGKKREEKPNGKIPQCEEIQEEVEDETIIESAAAPVVAAAPAPEPVADLD
VEPTAAPVTVELKNATQPSPALTEPSPAPSPKEKKKKKVAKVEPAVSHTAPLVAASAPVK
SSTVPASTKAPMSAPTKATAPSSESAPVPAKSAPVPAKSAPVPAKSAPAPAKSAPVPAKP
APAMSAPAPAKSAPAPANSAPAPAKSAPAPAKSAPAPAKSAPAPANSAPAPAKSAPAPAK
SAPAPAKSAPAPAKSAPAPAKSAPAPAKSAPAPAKSAPAPAKSAPAPANSAPAPAKSAPA
PAKSAPAPAKSAPAPAKSSPASSKSAPVLEAVTKDVPVMAVPPVGSQQTSAVAAKVQEPK
KKASKKKTEPVTVVDSADAPLYLPYKALVSTISSMVFSEVEAHRLIEILSEKVGIIQDTW
HKATQKGDPVAMLKKQLEEREKQLAAEQEDASVAKNRLRELTKELSAEKSKVASVETRLS
SQLSKREQEMIALQARMQASYEDHVAQTQGSNAKIVSLQDQLEKGPNAQLARLQQENSIL
RDALNQATSQAESKQNAELAKLHQECTKLTKELGEKTEGLVADEHIRKGLEAKLSATEKQ
LSLLQASHGESEQALQRRMEEVCEELRATQSQNGSLQATLDNAQQDSSALSEYQVRIGRL
EADISERSAQVEALTAQLEETQTEKSQLVQQVASINSLLEANQTKVEEDKDQVNAAEAEE
LKLSLQERTNQLNTFHEELKQLQLKQEAAENTIGELEERNKSEDVALITSLQDELKNLKE
EVEQLNNTAHTVASTELELLQKSLTEKDVLVSSLQEELREEREKMATDASVTAELSALQS
ETKETLQTLFPQIPVEMEQSNWLQVFTQKAQETLSQQSQESSTVLPELLGKLKEAEDSHG
SLQAECEQYRIVLAETEGMLKHLQNSVEEEEVVWKSKMANSEEQLSVALEKVSKLEAEHQ
SVEQLKEQMMLLEAQLEKQSDNQETSEEVEQEHAQVKLQLLECQSQLDLAQKEAQAHKEE
LTQVREQLGGITMQDQREQNGPAEAQPSQFQNESSQTTEKLHGEVAQRQQLSEEFEQAQK
TITELQAQLDLLNVSAESPQADTEDVPQLQERLEKEKKLSKDLGQAATKLQQLLKATQEQ
LTKERDTVRTLQEHLEGKEESVELKEGTSV
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggatatctatgacccccagacccttggggtaatggtgtttggtggattcatggtggtc
tctgctcttgggattgctcttgtctccaccttctccatgaaggagacctcttatgaggaa
gccctggctaaacaacgcagagagctgggtaagatacagtccactcgctctgacaaaaag
aagaaggacaaagcaactgagaagaagacccgtggaaagaaaagagaggaaaagcccaat
ggaaaaatcccacagtgtgaagaaattcaagaggaagttgaagatgagacgatcattgag
tctgctgctgccccagttgtagctgctgcgcctgcccctgaacctgtcgctgatttagat
gttgagccaactgcagcaccagttaccgtcgagctaaagaatgccactcaaccaagccct
gctctcactgagccctcacctgcaccctcaccaaaagagaaaaagaagaagaaggtggct
aaagtcgagccagccgtttcccatacagccccacttgtggctgcctctgcacctgtcaag
tcatccacagtacctgcatcaaccaaggcccccatgtccgccccgactaaagcaaccgcg
ccatcctctgagtctgccccagtgcccgccaagtctgccccagtgcccgccaagtctgcc
ccagtgcccgccaagtctgcccctgcgcccgctaagtctgccccagtgcccgctaagcct
gcgcctgctatgtctgcccctgcgcccgctaagtctgccccagcgcccgctaattctgcc
cctgcgcccgctaagtctgccccagcgcccgccaagtctgccccagcgcccgccaagtct
gccccagcgcccgctaattctgcccctgcgcccgctaagtctgcccctgcgcccgccaag
tctgccccagcgcccgccaagtctgcccctgcgcccgctaagtctgccccagcgcccgcc
aagtctgccccagcgcccgccaagtctgccccagcgcccgcaaagtctgccccagcgccc
gcaaagtctgccccagcgcccgctaattctgccccagcgcccgctaagtctgccccagcg
cccgcgaagtctgccccagcgcccgcgaagtctgccccagcgcccgcgaagtcttcacct
gcttcatccaagagtgccccagtgctggaagcggtcactaaagatgtccctgtgatggca
gtgcctccggttggatctcagcagacctctgctgttgcagcaaaagtacaggagcccaag
aagaaggcctctaagaaaaagactgagcctgtgacggtggtggattctgctgatgctcct
ctgtacctgccctacaaggctctggtgtcgaccatcagtagcatggtgttcagtgaggtc
gaggctcataggctcattgagatcctgtctgagaaagttggcatcatccaggacacctgg
cacaaggccactcagaaaggagacccagtggccatgctgaagaaacaactggaggagagg
gagaagcagctggcggcagagcaagaggatgcttctgtggcaaagaatcgcctcagggaa
ctcaccaaggagctgtctgctgagaagtcgaaggtggccagtgtggagacgaggctgagt
tcccagttgagtaagagggagcaagaaatgattgctctgcaagcacgcatgcaggctagt
tacgaggaccatgtggcgcagacccaggggtccaatgctaagattgtcagcctgcaggac
cagttggaaaaaggccccaatgcccagctggcccgtctacagcaggagaactccattctt
cgcgacgccctcaaccaagccactagtcaggctgagagcaagcaaaatgcagagctggcc
aagctgcatcaggaatgcacaaagttgaccaaggaacttggagagaagaccgaaggtctg
gttgctgatgagcacatcaggaaagggctggaagccaagctgtcggctacagagaagcag
ctctccctgctgcaggccagccatggggagagtgagcaggcgttgcagaggagaatggag
gaggtgtgcgaggagctcagggcaacgcagagtcaaaacggcagtctgcaagccactttg
gacaatgcccagcaggacagcagcgcactctcagagtatcaagtgcgtattgggagattg
gaggctgatatcagtgagcgctctgctcaggtggaggccctcactgcacagctagaggag
acgcagacagagaaaagccagcttgtacagcaggtggcctccatcaactccctgctagaa
gccaatcagaccaaagtggaggaggataaggaccaggtgaatgcagcagaagcggaagag
ctaaagctcagtctgcaagagagaaccaaccagttgaacacatttcacgaggaactgaag
caactgcaattgaagcaggaagctgctgagaacactattggggagctagaggaaagaaat
aaaagtgaggatgtcgctcttatcacatcgcttcaggatgaacttaaaaacctcaaggaa
gaggtggagcaacttaacaacacagcccataccgttgcctccacagagcttgaactgcta
cagaaaagcctgactgagaaggatgtccttgtctcatcactacaagaggagctcagagaa
gagagagaaaagatggccaccgatgcaagtgttacggcagaactgagcgctcttcaaagt
gaaaccaaagaaactctccagacactattcccacagatacccgtagagatggagcagtcc
aactggttacaagtatttacacagaaggctcaggaaactctcagccagcagagccaggaa
tccagcacagtgttgcctgagttgctcgggaaattgaaggaggccgaggacagccatggc
tcactgcaggctgaatgtgaacagtaccggatagtcctggctgaaacggaaggaatgcta
aagcatctgcagaatagtgtggaggaagaagaggtggtatggaagtccaagatggctaat
tctgaggaacagctgagtgtggcgttggagaaggtcagcaagctggaggcagaacaccaa
agtgtagaacagttgaaggagcagatgatgcttctggaagcccagctggagaagcagtca
gacaaccaggagacctcagaggaggttgagcaggaacatgcgcaggtgaagctgcagctt
ttggagtgtcagagccagctggatttggcccaaaaggaggcccaggcacacaaggaggag
cttacacaggtcagagagcagctgggcgggatcacgatgcaggatcagcgagaacagaat
ggcccagctgaggctcaacccagtcagttccagaacgagtcgagtcagacaactgagaag
ctgcacggggaggtggctcagagacagcagctttcagaagagtttgagcaggcccagaag
actataacagaacttcaggctcagttggatcttctaaacgtttctgcggagtcaccacaa
gctgacacagaagatgttccacagctccaggagcgcctggagaaggagaagaagctgtcc
aaagatctgggccaggcggccaccaagctgcagcagctgctcaaagccacccaggagcag
ctgaccaaagagagagacacggtgagaacacttcaggagcacctggaaggaaaggaggaa
tccgtggagctgaaggaaggaacatccgtctga
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