Pseudoliparis swirei (Mariana hadal snailfish): 130207168
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Entry
130207168 CDS
T09868
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130207168 (six2a)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
130207168 (six2a)
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GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Motif
Other DBs
NCBI-GeneID:
130207168
NCBI-ProteinID:
XP_056291624
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Position
17:16961707..16965305
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AA seq
290 aa
AA seq
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MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKIMESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELSEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNGNSHNPLTSSMNGNKSLLGSSDDDKTPSGTPDHSSLSPALLLGSNS
GLQSLHGLAPPQGPSAIPVPGGVDSVHHHHLMHHDTILNPMSSNLVDLGS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcttccgacgtttggctttacgcaggagcaagtcgcgtgtgtttgcgaagtt
ctccagcaaggggggaacatcgagcggctggggcgcttcctctggtccctcccggcgtgc
gaacacctccacaagaatgagagcgtcctcaaagcgaaagccgtggtcgcgttccaccgg
ggcaacttccgagagctctacaagatcatggagagccaccagttctcgccgcacaaccac
ccgaagctgcagcagctgtggctcaaggcgcactacatcgaggcggagaagctgagaggc
cgtccgctcggcgctgtggggaagtaccgcgtgcggagaaagttccccctgcctcgctcc
atctgggacggcgaggagacgagctactgcttcaaggagaagagcaggagcgtcctgcgg
gagtggtacacccacaacccgtacccgtccccgcgggagaagagagagctgtccgaggcc
acgggactcaccaccacgcaggtcagcaactggttcaagaaccgacggcagcgagaccga
gccgcggaggcaaaggaacgggagaacaacgagaactccaacggcaatagtcacaaccca
ttgacttcttccatgaatggaaataaatctctattggggagctcggacgacgataaaacg
ccttcggggacgccggatcactcgtctctgagcccggctctgctgctcggctcgaacagc
ggtttacagtccctgcacggcctcgcgcccccgcagggacccagtgccatcccggtaccc
ggcggtgtagactcggtgcaccatcaccacttaatgcaccacgacaccatactgaaccct
atgtcttctaatctagtggaccttggctcctaa
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