Pseudoliparis swirei (Mariana hadal snailfish): 130207264
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Entry
130207264 CDS
T09868
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130207264 (arid5b)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
ARID
130207264 (arid5b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
130207264
NCBI-ProteinID:
XP_056291758
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Position
17:complement(17368042..17438869)
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AA seq
1178 aa
AA seq
DB search
MEPNSLKWVGSSCSLHGPYIFYKAFKFHRDGKPRILSLGDFFFVRCKPEDPICIAELQLL
WEERTSKQLLSSSKLYFLPEDTPQGRTVIHGEHEVIAVSEKVVVRLEDLAKWTVPDFSGW
THCLKAEPLKPSVLRELGTNGMREALHRYRDSTLTSGLNFKDVQRERAQLGQEEDGRKVL
VLSYPQYCRFRSVLARLREQPSSLLIDHTVLALGGIAALDGSTKILYCRDTFEHPALLKN
ESICDEFAPNLKGRPRKKKLSISLRRDSQGQGSSGSTQGSTAVTAQDPCSPDIKTTIKVK
PNCKMVPNGRIHPTAKHRAYGLSKKSSAEEKEREKEKEKEKEERNEKEENKEEETSEESR
AEEQAFLVDLYKYMKERDTPIERIPFLGFKQINLWTMFEAAQKLGGYELITVRRQWKHVY
DELGGNPSSTSAATCTRRHYERLLLPYERHVKGEHDKPLPFVKPKKQEGGQEKASGAKTK
GVGAKKFKGSNNPKLGSKKDRGEAVKDQEQSQDSKEKEDNQELPTDIEEEVSLRDEPIVI
EEEELHVTLKKEESLAVEQPSSLCPKESDCRAPHAGLSLHTGPGPRPEWRQISEALQAKL
SCEQQIEGHFIPKILYLPHRWDQNRPAGHVALPEPSSRAKDCIESHGGRVGKVLPMCKQA
DRQCIDLSTDSFPEKEHYVAIKKESTQNPAQTAAYCKSSQGVMSPLAKKKLLSQVCESNP
FSFTSPSLQPPHPTATSSLPVVSVPEREREKRKGDEEVVGQRLGCLSDSIPVVAPIFRPS
VIQHAQSSKPHQQAPSGPSEKSAAGELSETYSCRTSRHLQPQVNPPWQPYLPQAHAQDGV
ENAGETLLQGPASQPRSYTGDCYSSPHLHSLYRQTESCLSQERMVGFPNGDRRERYIRDH
EGSFVCGGLEQEGLAYRSHYGDRTQTHIERREADDEPRDFTISKPLSQRGSSFSKPSFCN
LPYSIMHQGLDSHPKACRVPPMTITSPKQNPAESSQPFHSPKTLSDSSLASPIRPGKRSL
AEHEGEDAPERKVRVVTPVHPAGAIRRSDPEELKPAEPAHAVHLNNHLPEGHPTTTYPPH
LYTAMYPPGSLVSPGDVLHQHPGLQYLKSQSAVSPLMPPLAFHSMMFHRQLLAASPSPHH
FYRHPGGAALYGDLLHHLYPLSTLPPPQLSSVHPSTRL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaactcactgaagtgggtgggctcgtcttgcagtttacatggaccatatata
ttctataaagcctttaaatttcaccgggacggcaaaccaaggattctgtctctcggagac
tttttcttcgtcagatgtaaaccggaggatcctatttgcatagcggagcttcagctgctc
tgggaagaaagaacaagcaagcaacttttatcaagctccaaactttattttctacccgag
gataccccccagggacgcacggtcatccacggagagcacgaggtaattgcggtgtctgag
aaggtggttgtgcggctggaggacttggcgaagtggacggtaccggacttctcaggatgg
acccactgtctgaaggccgagccgctcaaaccctcggtgcttcgggagctggggaccaac
gggatgcgggaggccctccaccgctaccgggacagcaccctgaccagcggactcaacttc
aaggatgtccaacgggagagggcacagctgggccaggaggaggatgggcggaaggttctg
gtcctcagttacccccagtattgccggttccgttcagttctggcgcggctcagagagcag
ccgtcctctctgctcatagaccacacggtgctcgcgctgggcggcatcgctgcgttggac
ggcagcacgaagatcctgtactgccgggacaccttcgaacatccggccctgctgaaaaac
gagagcatctgtgacgagttcgctccgaaccttaaggggcgaccgaggaagaagaagctg
tccatttctctgaggagggactctcagggtcaaggttcatcggggtcaacccaggggtca
acagcagtgacagcacaggatccctgcagcccagacatcaaaactactatcaaggtcaaa
cctaactgtaaaatggtacccaacggaagaattcacccgacagccaaacacagggcctac
ggcctcagcaagaaatcctcagctgaggagaaggagcgagagaaggaaaaggagaaggaa
aaagaggagaggaacgagaaggaggaaaataaagaggaggaaacatcagaggagagccga
gcggaggagcaagcattcttagtagatctctacaagtacatgaaagaaagggacacgccc
atagagaggatcccattcctcggcttcaaacagatcaacctttggaccatgtttgaagct
gctcagaaactaggaggatatgagttgatcacagtgcgaagacagtggaagcatgtatat
gatgaattgggcgggaacccaagcagcacaagtgccgccacgtgtacacgcagacactac
gagaggctcctcctcccctatgagaggcacgttaaaggcgagcacgacaagcccctcccc
ttcgtcaaacccaagaagcaggagggcggccaagagaaggcttcaggagccaaaaccaaa
ggagtgggggccaagaaattcaaaggctccaacaatcccaagctggggagtaaaaaggac
agaggggaggcagtgaaagaccaagaacaatcacaggactccaaggagaaagaagataat
caagagctccccacagacatagaagaggaggtatctctgagagatgaaccaattgtaata
gaggaggaagagttacacgtaaccctaaagaaagaggagtcattggcagttgagcagcca
tcttcactctgtcccaaagagtcagactgcagagccccacatgctggtttgtccctccat
acggggcccggtccccggcctgaatggaggcaaatcagtgaggccctccaagcgaaactc
tcctgtgaacagcaaattgaaggacatttcattcctaaaatcctgtatctgcctcaccgt
tgggaccagaacagacctgctggacatgttgctctgccagagccctcttccagggccaaa
gactgcatagaaagccacggtgggagggtggggaaagtgttgccgatgtgtaagcaggca
gacagacagtgtatagacttgagcacagattccttcccagagaaagaacactatgtggcc
ataaagaaggagtccacccagaaccctgcacagacggctgcctactgcaaatccagccaa
ggggtcatgtctcctttagccaaaaagaagctcctctcccaagtgtgtgagtccaaccct
ttctcctttacgtctccttctcttcagccgccgcatcccacggcgacttcctctctccct
gtcgtatcagtacccgaaagggagagggagaagaggaagggcgatgaggaggtggtagga
cagaggctcgggtgtctgtcagacagcatcccggtggtagcgcccatcttcaggccatca
gtcatccagcatgcccagagcagcaagcctcaccaacaagcccccagtgggccctccgag
aaaagcgctgccggggaactctcggagacgtacagctgccggaccagccgtcacctccag
cctcaagtcaacccgccgtggcagccctatctcccccaagcccatgcccaggatggtgtg
gagaacgccggggagacgctactccagggcccagcttctcagccccggagctacaccggc
gactgctactcctccccccacctccacagtctgtacaggcaaactgagagctgtctgagt
caggagaggatggttggcttccccaacggagatcggagggagcgctacatcagagaccat
gaaggcagctttgtctgtggcggcctagagcaagagggcttggcctacagatctcactac
ggtgacaggactcaaacacacatagagaggagagaggcagacgatgagcccagagacttt
accatctcgaaacctctctctcagagggggtcctccttctccaagccctctttctgcaat
ctcccgtattccatcatgcaccagggtttggattcccaccctaaggcgtgcagagttcct
cccatgaccatcacttcccccaaacagaacccagcagagtcatcgcagccatttcacagc
ccgaaaacgttgagcgattcgtccctcgccagccccattcgacccggtaagcgaagcctc
gcggagcacgagggcgaggacgctccagaaaggaaggtccgcgtggtgacgccggtacac
ccagccggagcgatccgacgcagcgacccggaagaactcaaaccagccgagccggcccac
gccgttcacctcaacaaccacctccctgagggccacccaaccactacctaccctccacac
ctctacactgccatgtatccacccggcagcctggtctccccaggagacgtgctgcaccag
cacccgggtctgcagtacctgaagagccagtcggcagtgtctcccctcatgcccccgtta
gccttccactccatgatgtttcacaggcagctgctggccgccagccccagcccgcaccac
ttctacaggcaccctggcggggcagcactgtacggggacctactgcaccacctgtaccct
ctctccaccctcccaccacctcagctgtcctcggtacaccccagcaccagactgtga
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