Pseudoliparis swirei (Mariana hadal snailfish): 130207272
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Entry
130207272 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00562
Inositol phosphate metabolism
pswi01100
Metabolic pathways
pswi04020
Calcium signaling pathway
pswi04070
Phosphatidylinositol signaling system
pswi04081
Hormone signaling
pswi04082
Neuroactive ligand signaling
pswi04261
Adrenergic signaling in cardiomyocytes
pswi04270
Vascular smooth muscle contraction
pswi04310
Wnt signaling pathway
pswi04371
Apelin signaling pathway
pswi04540
Gap junction
pswi04621
NOD-like receptor signaling pathway
pswi04912
GnRH signaling pathway
pswi04916
Melanogenesis
Module
pswi_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
130207272
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130207272
04371 Apelin signaling pathway
130207272
04020 Calcium signaling pathway
130207272
04070 Phosphatidylinositol signaling system
130207272
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130207272
04081 Hormone signaling
130207272
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
130207272
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130207272
09152 Endocrine system
04912 GnRH signaling pathway
130207272
04916 Melanogenesis
130207272
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130207272
04270 Vascular smooth muscle contraction
130207272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130207272
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
130207272
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
130207272
Endocytosis
Macropinocytosis
Phospholipase C
130207272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
C2
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
130207272
NCBI-ProteinID:
XP_056291768
LinkDB
All DBs
Position
17:23454654..23479326
Genome browser
AA seq
1171 aa
AA seq
DB search
MASAQPGVHALKLQPSSVSLTLRNGSNFIKWDEDLSTVSPVTLHVDPHGFYLYWTDQNKE
TELLDLTLVKDVRTGRSTKTPKETKLRELLDVGNLVGRLENRMVTVVTASDLVNVTQLNF
IASQEEEAKVWCEEVFALSSNLLSLNLNRDRSLLKAYVRLTLQPSAEGRIPVKNFTRLFS
ADRKRVENALESCRLPCARGDSIKLEDLTLDVYRSFLDSLCPRPEISNIFKLQGWGDGTL
SLDQMTEFINNKQRDPRLNEILYPPLRPHQTLSLMGRYQQDQKQLEQGVITLQALSSYLS
SDENGVIPPEKLDQSEDMSFPLSHYIINSSHNTYLTAGQLAGSSSVEMYRQVLLAGCRCV
ELDVWKGRTAEEEPVITHGFTMTSEIPFKEVIEAIAECAFKTSPFPVILSFENHVDSLKQ
QAKMAEYCQSIFGDALLIDPLDKYPLDSGVPLPSPQELIGKILIKNKKSHKPSNNTDTKR
LTDQPANQSNEPVSPSNNTGELEAESEEEDDDDDDDGKKVSGDVIGSXGAGSAEAVATEE
MSTLVNYVQPTKFNSFEASKKAARFFTMSSFVETKALELLTKSPVEFVEYNKTQLSRIYP
KGTRVDSSNFMPQLFWNAGCQLVALNYQTIDLSMQLNLFMFEYNGRSGYRLKPEFMRRPD
KHFDPFTENTVDGIVANTLSVKVISGQFLTERRVGVYVEVDMFGLPADTRRKALKTKTSQ
NNNAINPVWDEEPIVFKKVILPTLASLRIAAFEEGGKFIGHRIIPLTAIRPGYRYISLRN
EKNQCLTLPAVFVHIEVKDYVPDTFADVIEALSNPIRYVNLLEQRSKQLAALTLEDVDED
TQPEDEADSCGAERKMEVKSPPLENGLSPASCPAGHAPVATTPKASATNQQAAATEAAKP
AAKSEDLVLSVLIDVPVCAVEVLQQSKLYLKEQRRQFKELKELARRHQKKTSELLRGAGS
KYKKAARQSGKTRASRPDGEEDERLQKLKDEQQQQLLALRQQQCNSQRDLQGEHINMLTE
RLSALAEESHSGQMKNLKDICDKEKKELKRQMDRRRTEKINQAKTKEKHLAEEEKNEINK
SFVNEVVQNIKRLEETQAKRHDQLVEQHNELLQGIQDQKPKLQAAVEAEFQEKFQCLPGE
IQDFLQDRKTEVRGHSRSRPSTPHEALSEED
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgctcagccgggggtccatgccttgaaactccagccttcctccgtctctctg
acgctgaggaacgggagcaacttcatcaaatgggacgaggatctgtccaccgtgagtccg
gtgacgctccacgttgacccgcatggattctacctctactggaccgaccagaacaaggag
acagagctgttggacctgaccctcgtcaaagatgtcagaacggggagaagcaccaaaacc
ccgaaggagaccaagctgcgggagctgctggatgtgggcaacctggttggccggctggag
aaccgcatggttaccgtggtgacggcctcggacctcgtgaacgtcacccagctgaacttc
atcgcttcacaggaggaagaagccaaggtgtggtgtgaggaagtgtttgctctgtcttcc
aacctgctgagcctgaacctcaacagagaccgcagtctgttgaaagcgtacgtccggttg
accctgcagccgagcgcggaggggaggattcccgtgaagaacttcactcgtctgttctca
gccgacaggaagagggtggagaacgcgctggagagctgccggctgccctgcgctcggggc
gacagcatcaagctggaggacctcactctggacgtgtaccggagcttcctggacagcctg
tgtcctcgaccggagattagcaacatcttcaagctgcaagggtggggagacgggacgctc
tcattggaccagatgacggagttcatcaacaacaagcagagagacccgagactcaacgag
atcctgtacccccccctgagaccccaccagaccctcagcctcatgggccggtaccaacag
gaccagaagcagctggagcaaggcgtcatcacgctgcaggcgctgtccagctacctgtcc
agtgacgagaacggcgtcatccccccggagaagctcgaccaatcagaagacatgagcttc
ccgctgtcgcattacatcatcaactcgtcacataacacctacctgacagccgggcagctg
gccggcagctcctcggtggagatgtaccgccaggtgctgctggccggctgccgctgcgtg
gagctggacgtgtggaagggccgcacggcggaggaggagccggtcatcacgcacggcttc
accatgacctccgagatccccttcaaggaagtgattgaagcgattgcagagtgtgccttc
aagacgtctcctttccctgtcatcctctcctttgagaaccacgtggactctttgaagcag
caggcaaaaatggctgaatattgtcaatctattttcggagatgctctgttgattgaccct
ctggacaaataccctctggattccggcgtgccgctgcccagtcctcaggagctgatcggc
aagatcctcatcaagaacaagaaatctcacaaaccgtccaacaacacggacaccaaacga
ctgacggaccaaccggccaatcagagcaacgaaccagtgtctcctagcaacaacacggga
gagctcgaggctgagagtgaggaagaggatgatgacgacgatgatgatggtaaaaaggtc
agtggtgacgtcataggaagctgaggggcgggctctgcggaggcggtggccacggaggag
atgtcaacgctggtgaactacgtccagcccaccaagttcaactccttcgaagcatccaag
aaggcagctcggtttttcaccatgtcgtccttcgtggagaccaaggctctggagctcctc
accaagtcaccggtggagtttgtggaatataataagacccagttgagtcgtatctacccc
aaaggaacccgagtggactcgtctaacttcatgccgcagctcttctggaacgccggctgc
cagctggtggcgctcaactaccaaaccatcgacctgtccatgcagctgaacctcttcatg
ttcgagtacaacgggcgcagcggctaccggctgaagccggagttcatgaggcggccggac
aaacactttgaccccttcacggagaacacggtggacggcatcgtggccaacacgctgtcc
gtgaaggtgatctccggtcagttcctgacggagcggcgggtgggcgtgtacgtggaggtc
gacatgtttggacttcctgcggacaccaggaggaaagcgctgaagaccaaaacctctcag
aacaacaacgccatcaacccggtgtgggacgaggagcccatcgtcttcaagaaggtgatc
ctcccaactttggcctctctgagaatcgccgcttttgaggaaggagggaagtttattggc
catcggattattccactcactgccatacgaccaggttatcgttacatcagcctgaggaac
gagaagaaccaatgtctgactctcccggccgtgttcgtccacatcgaggtcaaagactac
gtccccgacaccttcgcagatgtgatcgaggcgctgtccaacccgatccgctacgtcaac
ctcctggagcagaggtccaaacagctggcggctctgactctggaggacgtggacgaggac
acacagcccgaggacgaggcggacagctgtggtgctgagcgtaagatggaagtgaagtcg
ccgccgctggagaacggcctcagcccggcctcctgccccgcaggccacgcccccgtcgcc
acgacgcccaaagcttccgcaaccaatcagcaagcggcagcgacagaggcagcaaagcct
gcagcgaagagtgaagatctggtgttaagtgttctgatagacgtgccggtgtgcgccgtg
gaggtgctgcagcagtccaagctctacctgaaggagcagcggcgccagttcaaggagctg
aaggagctggcgcggcgccaccagaagaagacctccgagctgctgcggggcgccggcagc
aagtacaagaaggcggcccggcagagcggcaagaccagggcctcgcgcccggacggcgag
gaagacgagcgcctccagaagctgaaggacgagcagcagcagcagcttctggctctgagg
cagcagcagtgcaacagccagagggacctacagggggagcacatcaacatgctgacggag
cgactgagcgctctggccgaggagagtcacagcggccagatgaagaatctcaaagacatc
tgtgacaaggagaagaaagagttgaagaggcagatggatcgaaggagaacggagaagatc
aaccaagccaagaccaaagagaagcatctggctgaggaggagaaaaatgagatcaacaag
tccttcgtcaacgaagtcgtccagaacataaagcggctagaggagactcaggcgaagcgt
catgaccagctggtggagcagcacaacgagctccttcaggggatccaggaccagaaacca
aagctgcaagcagccgtggaggccgagttccaggagaagttccagtgtttgcccggagag
attcaagacttcctgcaggacagaaagacagaggtcagaggtcacagcaggtcacggccc
tcgaccccacatgaagctctctcagaggaggactga
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integrated database retrieval system
