Pseudoliparis swirei (Mariana hadal snailfish): 130207296
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Entry
130207296 CDS
T09868
Symbol
washc2c
Name
(RefSeq) WASH complex subunit 2 isoform X1
KO
K18462
WASH complex subunit FAM21
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130207296 (washc2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130207296 (washc2c)
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Others
WASH complex
130207296 (washc2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP-ZIP_m
CENPH
Motif
Other DBs
NCBI-GeneID:
130207296
NCBI-ProteinID:
XP_056291797
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All DBs
Position
17:13514058..13524511
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AA seq
1450 aa
AA seq
DB search
MSGLPEGVANGPSRSEYLRKDAQTWERPWTLEEIRQSSANWSLAADSGLFLFLQDFSQRM
LSKTHDIEKQLDSLMRDTKATDSCLHSVFNDFLMLSNTQFIENRVYDEEVEETIPKTDAL
EKQPEQEKTREQREAELIPKMQEAVNHGLRVLESAFEHLDIKAGNSDSEDDEVTDRVEAI
LEPKDLYVDRPLPYLIGSQAFMEQEDVGLGDLSSDEMSVDSDRDSVIESEDGKDAVNSDG
DFNQEDDEVHTNNIRKKSSMLSYEEDDDDDNDEEEDEDSDIFGESDGDEDKDDSTKNTGP
SSFADELAARIKGEPVKKTEGDRASLSSKKKSKSKKEPKPAKPQAAEEDSDDMFKPPKMD
DDDFSPFGGKSGLFSGGRGLFDDDEEGDLFSEATNPPVSEEKKVLNESTKSTSQTAESDK
SGKKILAGAISVFPDNSLFSSGIKSDSVESKENGTPAPQASAASKQAPTGAAFGEGGGGL
FDEDEDDDFFSGTSLIKSDSAGDKKPKKAIDLFDEEDDDDGDIFSEKYSAPAQSQKEVVE
EKIKQPEKKMPAGAISIFGPGTQSLKKSPLSPSKESEKSGKNEPAPDAAVKLTQKPQMRG
LFSDDEDTPGSPAIPRSQSKPELTSREKANLPLLSLFDDEEEDLFASAAKSKAKPNHATA
STPQLSTAVSSSLFSDDEDQWVSSVGSAGKPEVKTGGMKPSASAPSSLTSGPSSFTSAKM
SHKSSLFDNYDEDDLFAPTTQSSQKSQRVALMFEDEGDDEDKGSVSGIKPAFNTSIAAPA
AKTPAVASQSSSPLEESEEVIVSRTTAQDQPSEKEEPAAGTPEPPSAPSSGISQSKKKPA
GAVVLFGGIDILANKRTKSPLDEVDNDDSFLSKDSPPPNVKREEKVKINTVSLFDDEEED
ESDWNEPIFTPSKSPARDTLKPTEERPAATSTGVFQDEELLFSQTQQKDNDPDVDLFATS
DKAASSKLSEAKPATQSLFAEEDEDELFSSIEPKAPRPKVADKPSKPLDRAPLASPESVS
EIQKPEPSPVKPKGSSSRIGKLHANLMIDPTALLPGATPIMSGAVSALPGMAPSSFSGMS
NSSLGPSPATTPTGAQGGVNFDSPAQVTTLQSAHKGRAKGFVQRRPQSRAARQQAAHRSL
KDKEETEGGDAPGPNPNLSGSALPPPEKSSQKHASPILANSAGPADLPASSASQSSLSET
SPRPPVLNTGKKDASKDGSSTKALPSSDNDDLCGSDGLFGATSVTNTPSARQTTKPTQPQ
ARSGAAVKKDADKSTLPSILNANQSDLFQKVKPRSTTKKAKATHYLEEDDDDADIFGVSN
SSTQASTNSKEIKNSSSFSKQDIFQGEVSTVPKVHKKNKEKTLDASLFDDNIDIFADLTD
TLKPKQKSKTKGETKSIFADDMDDIFSPSTVKPVTKAPQKSKKTPRSQETSTEADSSNIF
DDPLNALGGN
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggttgccagagggtgtagcaaatggcccaagtaggagtgaatacctcaggaaa
gatgctcagacttgggagagaccctggactcttgaagagatccggcagagcagtgccaac
tggtccctcgcagctgactcaggactcttcctgtttctccaagacttctcccagagaatg
ctgtcaaagacccatgatattgaaaagcagttggacagtctgatgcgtgacaccaaggcc
acagatagctgcttgcactctgtctttaacgactttctcatgctttccaatactcagttt
atagaaaatagggtgtatgatgaagaggtagaagagactattcccaagaccgatgctttg
gagaagcagcctgagcaggagaagactcgagagcagagagaggcagagttgatccctaag
atgcaggaagcagtaaaccatggtctgagagtgctggagtcggcatttgagcatctagac
atcaaagcgggaaactctgattcagaggatgacgaggttacagacagagtggaggccatc
ctggagcccaaggacctttatgtggacagaccacttccatatctgattggttcccaggcc
ttcatggaacaagaggacgttggacttggtgatctctccagtgatgaaatgtccgttgac
agtgacagagacagtgtaattgagagtgaagatggcaaagatgcagttaattcagatggt
gactttaatcaggaggatgatgaagttcacactaataatattaggaagaagtcatccatg
ttgagttatgaggaggatgatgatgacgataatgatgaagaggaggatgaggattctgac
atatttggagaatcagatggggatgaagacaaagacgacagcacaaagaacaccggccca
tcgtcgtttgctgatgagctggcagcccgaatcaaaggggaaccagttaaaaaaacagaa
ggagatcgcgcatcattgtcatctaagaagaaaagtaaaagcaagaaggaaccaaagcct
gcaaagccacaggcagctgaagaggacagtgatgacatgttcaagccaccgaaaatggat
gatgatgacttctccccatttggagggaaaagtggcctctttagtggagggagaggcctg
tttgacgatgatgaggagggtgatcttttctctgaggctacgaatcctcctgtgtccgag
gaaaaaaaggtgctgaatgaaagcacgaaaagcacatctcaaactgcagaatctgacaaa
tctggaaagaagattctagcaggtgccatttcagtattcccagataacagcctgttcagt
tcagggattaaatcggattcagtcgagagcaaggagaatgggactccagctcctcaggcc
agcgctgcctccaaacaggctcctacgggagctgcttttggtgaaggaggcggtgggctg
tttgatgaggatgaggatgatgacttcttcagtggtacaagcctgataaagtctgactct
gcgggagacaagaagcccaagaaagctatcgacctcttcgatgaagaagatgacgatgat
ggtgacatattcagtgagaagtacagtgctccagcacagagccagaaggaggtagtggaa
gagaagattaagcaacctgagaaaaagatgccagcaggggccatctccatatttggaccc
gggactcaaagcctgaagaaaagtccgctgtctcccagcaaagagtctgagaaatctggg
aagaatgagccagctcccgatgctgctgtcaagctgactcagaaaccccagatgagaggc
ctcttctcagatgacgaagacacaccgggatctccagctatccctaggagccagtctaag
cctgagcttacaagccgggaaaaagccaacttgccccttttgtcattatttgatgatgag
gaagaggatctgtttgcatctgcagccaagtctaaagctaaacctaatcacgctacagcc
tccacaccacaactcagtacagccgtgtccagctccctcttcagtgatgatgaggaccag
tgggtgagttctgtcggtagtgcggggaagccagaggtaaagacaggcgggatgaagccc
agtgccagtgccccctccagtctcaccagtggcccctccagtttcaccagtgccaaaatg
tctcacaaaagcagcctctttgataattatgatgaagatgacctgtttgctccaacgaca
cagtcaagtcagaaatctcaaagagtcgctctcatgtttgaagatgagggtgatgatgaa
gataaaggatccgtttctggcatcaaacctgctttcaacacaagcattgcagccccagct
gctaagacaccggctgtggcctctcagtcgtcctccccgttggaggaatcagaggaggtc
atcgtttctcggacaacagcacaggaccagccatcggagaaggaggagcctgcagcgggg
acccctgagccgccatcagcgccctcatcagggatcagccaaagtaaaaagaagcctgct
ggagcagtcgttctttttggaggcatcgacattcttgccaacaagcggacaaagagcccg
ttggatgaagttgacaatgatgacagcttcctctctaaggacagcccaccacccaatgtc
aagagggaagagaaagtcaaaataaacaccgtcagtctgttcgatgatgaagaggaagat
gaatctgattggaatgagccgatattcacacccagtaaatccccagcacgcgacacacta
aagcctacggaggagcgtccagcagcaacgagcacgggtgtgttccaggatgaagagctg
ctgttcagccagacgcagcagaaggacaacgacccggatgttgatctgtttgccacttca
gacaaagctgcgagctccaagctcagcgaggcgaagccagcaacacaaagtctgtttgca
gaagaagatgaggatgaactcttcagctccatcgagccaaaagctcctcgtccgaaagta
gccgacaagcccagcaaacctttggaccgagcaccactagcaagtccagaatctgtgtct
gagattcagaaacctgaaccaagccctgtaaaacctaaaggttcttcatcaaggattggg
aaacttcacgccaatctgatgatagaccccactgcgttgctccctggtgctacccccatt
atgtcaggggctgtaagtgcgctccctggcatggctccgagttccttctctgggatgtcc
aactccagcctgggcccaagccctgccacaactcctacaggagcccagggaggagtgaac
ttcgacagcccagctcaggttacaacactgcaaagtgcacacaagggtcgtgccaaaggt
tttgtacagaggagaccccagtccagagcagcgaggcagcaagcggcccacagatcttta
aaggataaagaagagactgagggtggagatgctcctgggcccaatccgaatctgtccggt
tcagccttgcctccaccagaaaagtccagccagaagcatgccagtccgatattggctaac
tcggctggaccagctgacctgcccgcctcctcagcttctcaatcatctctctctgaaacc
tcccctagaccgcctgtactgaacactggaaagaaagacgccagtaaagacggcagcagt
accaaggcgctgccatcctctgataacgatgacctttgtggctctgacggtctgtttggg
gccacctcagttactaacacaccctccgccagacaaactaccaagcctacacaacctcag
gccaggagtggggcggcagtgaagaaagatgcagacaaaagcactctcccatccattttg
aatgccaaccagagtgaccttttccaaaaggtcaaaccaaggtcaacaacaaagaaagcc
aaggccacacactatttggaggaagatgacgacgatgcggatatctttggagtgagcaac
agctctactcaggcctccacaaatagtaaagaaatcaagaacagcagcagtttttcaaag
caggacatcttccagggggaagtttccaccgtgcctaaagttcacaagaagaacaaagag
aagaccctcgatgccagcttgtttgatgacaacatagacatttttgctgacctgacggac
actttaaaaccaaaacagaagtccaagacaaagggagagaccaagtcaatatttgctgat
gacatggatgacatcttttcaccaagcacagtaaaaccagttacgaaggcaccccaaaaa
tctaagaaaacaccacgctctcaggagaccagtacagaggcggattcaagcaacatattt
gatgatccactaaatgctcttggtgggaactga
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