Pseudoliparis swirei (Mariana hadal snailfish): 130207346
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Entry
130207346 CDS
T09868
Name
(RefSeq) rab11 family-interacting protein 2
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130207346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130207346
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
130207346
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Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RBD-FIP
UPF0242
Motif
Other DBs
NCBI-GeneID:
130207346
NCBI-ProteinID:
XP_056291870
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All DBs
Position
17:927177..943631
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AA seq
445 aa
AA seq
DB search
MSLGERSQKWFPTHVQATVLQATGLQAKGKNGTNDAYTIIQLGREKYSTSVAEKTLAPVW
REEASFELPGLLLEGNPEVYELSFIVMHRSLVGMDKFLGQRSVNLNGIFDNKQRKKTDWH
SLESKPGRKRKERGRVQVSVQFMRNNMTASMFDLSMKEKPRSPFSKLKHKMKGRKHDGGD
ASSAIVPRSAGDPDAAPPPEAKGGRSLLAGGHKLSAAHSMSDLVGAAPRAKPDTMNSIDE
RGGPHRHSQSEMPGCSDGEAPGDPFSGLGDALPHKYATLPRNRNPFMGGPGGPPGDKEDK
KEKKEKVSLLERVTGKKANATGRSGSSGDLRSPSASSPPDANPFVHKGEKKSKGSEPLTF
GQKKDVYGRPQEAKQESALAYSNLSFDEVVQDLIKQKEVVKRKDAHIRQLEDYIDDLLVR
VMEETPSILRTPYEPKRKAGKLTKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgggcgagcggtcccagaagtggtttccgacccacgtccaagccacggttctc
caggccaccggcctgcaggccaagggcaagaacggcaccaacgatgcctacaccatcatc
cagctgggccgagagaagtactccacgtcggtggcggagaagacgctcgcccccgtctgg
agggaggaggcctccttcgagctgcccgggctgctgctggagggcaacccggaggtctac
gagctgagcttcatcgtgatgcaccgctcgctggtcggcatggacaagttcctcggccag
aggtcggtcaacctgaacggcatcttcgacaacaagcagcgcaagaagaccgactggcac
tccctggagtccaagccgggccgcaagaggaaggagcgcggccgcgtccaggtgagcgtc
cagttcatgaggaacaacatgacggccagcatgttcgacctgtccatgaaggagaagccg
cgctcgcccttctccaagctcaagcacaagatgaagggccgcaagcacgacggcggcgac
gcgtcctccgccatcgtgccgcgctccgccggcgacccggacgccgcgccgccgcccgaa
gccaagggcgggaggtcgctgctggccgggggccacaagctctccgccgcccactccatg
tcggacctggtcggcgccgccccccgggccaagcccgacaccatgaactccatcgacgag
cgcggaggccctcaccggcactcccagagcgagatgcccggctgctcggacggggaggcg
ccgggcgacccgttctccggcctcggcgacgccctgccccacaagtacgccacgctgcca
cgcaaccgcaaccccttcatgggggggccgggggggccgccgggggacaaggaggacaag
aaggagaagaaggagaaggtcagcctcctggagcgcgtgacggggaagaaggccaacgcc
acggggcgctccggcagctccggggacctgcgctcgcccagcgcctccagcccccccgac
gccaaccccttcgtccacaagggtgagaagaagtccaaaggaagtgaacccctgaccttt
ggccagaagaaggacgtgtacggccgtcctcaggaggccaagcaggagagcgccctggcc
tacagcaacctgtccttcgacgaggtggtgcaggacctcatcaagcagaaggaggtggtg
aagaggaaggacgcccacatccggcagctggaggactacatcgacgacctgctggtgcgc
gtcatggaggagacgcccagcatcctgcggacgccctacgagcccaagaggaaggcgggt
aaactcaccaagaagtag
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