Pseudoliparis swirei (Mariana hadal snailfish): 130207381
Help
Entry
130207381 CDS
T09868
Symbol
hmgcll1
Name
(RefSeq) 3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00280
Valine, leucine and isoleucine degradation
pswi00650
Butanoate metabolism
pswi01100
Metabolic pathways
pswi04146
Peroxisome
Module
pswi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
130207381 (hmgcll1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
130207381 (hmgcll1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130207381 (hmgcll1)
Enzymes [BR:
pswi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
130207381 (hmgcll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
130207381
NCBI-ProteinID:
XP_056291939
LinkDB
All DBs
Position
17:11835754..11848106
Genome browser
AA seq
340 aa
AA seq
DB search
MGNVPTTVKHCLSYEQLIQDYPWLKRWLLEEKTITGHEYPEFVKIVEVGPRDGLQNEKEI
VPTEVKIQLIDMLSGTGLPVIEATSFVSSKWVPQMADHTDVLRGIQREPHVRYPVLTPNM
QGFQNAVAAGATEVAVFGSASETFSKKNINCSIDESMLRFEEVIKAAKERHIPVRGYVSC
ALGCPHEGHIEPSKVSQVAKRLYEMGCYEISLGDTIGIGTPGSMFKMLQSMMSEVPTSAL
AVHCHDTYGQALPNILTALQMGVCVVDSAVAGLGGCPYAQGSSGNVSTEDVLYMLHGMGI
ETGVNLTKVIEAGDFICNALGRESSSRVAQARGRTLRCVS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgtacccaccacagtgaaacactgcctgagctatgagcaactcatccaggac
tacccgtggctgaaacgctggctgctggaggagaagactattactggacatgagtatcca
gagtttgttaaaatagttgaagttggaccgagagatggacttcaaaatgaaaaggaaatt
gttccgacagaggtgaaaatccagctgatagacatgctttcaggaacaggcctgcctgtg
atcgaggccaccagctttgtctcttcaaagtgggtaccgcagatggcagaccacactgat
gtcctccgaggaatccagagagaacctcatgttcggtaccctgttttgacacctaacatg
caaggctttcagaatgctgttgcagctggtgctactgaagtggcggtgtttgggtcagcg
tctgaaaccttcagtaaaaaaaatattaactgctctattgatgaaagcatgctacggttt
gaggaagtcattaaagctgccaaagagcgacacattccagtccgtggatatgtttcgtgt
gcccttggttgcccccacgagggacacattgaaccttccaaagtctcccaggtggcaaag
aggttgtatgaaatgggatgctacgagatttcattgggggacaccatcggcattggtaca
ccaggttccatgtttaagatgctgcagagtatgatgagcgaagtgccgaccagcgctctg
gcagttcactgccatgacacgtacggacaagcgctgcccaacatcctgactgcacttcag
atgggggtctgtgtggtggattctgcggtagccggcctgggaggctgcccatacgctcag
gggtcatcgggcaatgtttccacagaggatgtgctctacatgcttcatggcatgggcatt
gaaactggtgtgaaccttaccaaagttatagaggctggagacttcatctgcaatgcttta
ggtcgcgagagcagctccagggttgcccaggcaagaggcagaacactgcgatgtgtttcc
tga
DBGET
integrated database retrieval system
