Pseudoliparis swirei (Mariana hadal snailfish): 130207395
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Entry
130207395 CDS
T09868
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130207395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130207395
03036 Chromosome and associated proteins [BR:
pswi03036
]
130207395
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130207395
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
130207395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
SYMPK_PTA1_N
HOOK_N
Motif
Other DBs
NCBI-GeneID:
130207395
NCBI-ProteinID:
XP_056291952
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All DBs
Position
17:13934866..13947565
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AA seq
1218 aa
AA seq
DB search
MADQVAVVCEQLVKAVNVMMGAETEHIYRLEALKFCEEFKDTSSFCVPCGLRLADKAQPA
EVRHFGLQILEHVIKFRWNNMQQNEKVQLKESAMQLLSTGTHAILEEESHIKDVLSRITV
EMIKREWPQHWPDMLKEMEALTSLGEAQTELVMLILLRLAEDVITFQTLPNQRRRDIQQT
LTLNMESIVSFMMAILNVNVEDYRKLNGSPGNELQARAHCRVAGATLNTLAGYIDWVSLV
HITNGNCHLLEMLCLLLSEPELQLEAAECLLIAISRKGKLEDRKPFMLLFDDVAINYILS
AAQSADGLAICESSAESNAVEVVERRYIFLKRLCQVLCALGGQLCSLVGSDVEVEVPANL
SKYTEAFLAFTTHASQFLKSSTLPTWGALFRHETLSKDPVVVEMAIKYLRASMTNLVKTG
FPSRNDNPSCRYSRADFDSDEDFNSFFNSFRAQQGEVLRIACRIVPLEAFQIAAEWLQYQ
IVSPIDTGDTASKTIEGLCSLLSPSVVQWDAMTVFMECLVTQIFKNVEEEKLPIDQSMEL
LQAVLNYNTKDPLILSCVLTNVSALFPFVKQRPHFLPQILDKLFNAITFEVGQESTAPRS
RAVKNVRRHACSSIIKICRDYPQYILPCFDLFYSHVKKLLSSNATLTHMEKCSLMESLVL
ISNQFKDFAKQKAFLDELMASVVTDWTSDEMRQVLCDPAVFLSFVGADQVVNEQSREAET
AGQNRGRLGFCLYAMLGVVKRARWPADLEEAKAGGFVMGYTAAGAPIYRNPYTAQFLVLL
PNLLALIRTNNSLFMPENTARLSESFSRAHEVMESDKKVVLGLSQHILGIHDSPVTRTNL
ERMQGFFSTLYDNCFHVLGNAGQALQQEFFTIENLSEEIAGSAFLSLDHVPDHRLRPMIR
VFLRQLVLACPQEYYNSLLCPLLGPLFAYMQQRLDAKWQVINQRSSVNDEEEEALCQESQ
VTQEILEEQLVRLLSREVLDLLTVSCISKKLTEPAANKEEVDEVDMMDSVQAASPAQPTE
ELTELGKCLLKHENIYMTLLTLSFTSLSWKDTTNCHRTASMVCWTLLRQVVGGNLLREAV
IWFFTSVLRGLQIHGQHEVCNSTLSQLAMLIYENLRPRYVELRAVMTQIPNISVETLDQY
DNRLIDPNAQKLGEKKRKDQFKRLIAGTVGKALCQQFRKEVHIRNLPLLFKQPKPEQDVT
SSDASGLEALFSPENKTL
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaagtggccgtcgtgtgtgagcagctcgtcaaagctgtgaatgtgatgatg
ggtgcagaaacggaacatatttaccgactcgaggccctgaagttctgtgaggagtttaaa
gatacgagctccttctgtgtcccatgtggcttacgattagccgacaaagcccagccagct
gaagtgagacactttggtttgcaaatcctggaacacgtcatcaagtttcgatggaacaac
atgcaacaaaacgagaaagtccagctgaaggagtctgccatgcagctgttgtcaaccggt
actcatgctatcctggaggaggaaagccacatcaaagatgtcctgtcacgaatcactgtg
gaaatgataaagagggaatggcctcaacattggccagatatgctgaaagagatggaggct
ctcactagccttggggaggcacagacggagctggtgatgttgatcctgttgaggctggcg
gaggatgtgatcaccttccagacgttgcccaaccagcgacgcagagacatccagcagaca
ctcaccctgaacatggaaagcatcgtcagcttcatgatggccattctgaatgttaatgtc
gaggactatcgtaaactgaatgggtcccctggaaatgaactacaggccagagctcactgt
cgagtcgcgggggctacgctgaatacactagcagggtacatagactgggtgtctctggtg
cacatcaccaatggaaactgtcatctcctggagatgttgtgtttgctgctgagtgaaccg
gagctgcagctggaagcagcagagtgtctgctcatcgctatcagccggaagggcaagctg
gaggataggaagccattcatgctgctatttgatgatgtggccatcaactacatcctttct
gctgcccagtcagcagatggactggcaatatgcgagtcgtccgctgaatcaaacgcagtg
gaggtggtagagcggcgttacatcttcctgaagaggctgtgtcaggtcctgtgtgccctg
gggggacaactctgctcattagtgggttcagatgttgaggtcgaggtacctgcaaatctc
agcaagtacacagaagcgtttttagccttcactacacatgccagtcagtttttaaagtcc
tccactctgcccacttggggagctttgttccgacatgagacgctgtcgaaggacccggtt
gttgttgagatggccatcaaatacctccgagcgtctatgaccaacctcgtcaagactgga
tttccatctagaaacgataaccccagttgcaggtactcccgcgctgactttgacagtgat
gaggacttcaattcgttctttaattcttttcgagcacagcagggagaggtcttgaggatt
gcatgtcgcattgtccctctggaggcattccagatagcagcagaatggctacagtatcag
atcgtgagccctattgatactggggatacagcatctaagactatcgagggcctgtgctcc
ctcttgtctccatcagtggtccagtgggatgcaatgaccgtcttcatggagtgtttggtc
acacagatttttaaaaatgtggaggaggagaagttgccgatagaccagagcatggagctg
ctgcaggccgtgctgaactacaacaccaaagacccgctcatcttgtcctgtgtgctcacc
aacgtctctgccctcttcccatttgttaaacaaaggccacacttcctgccacagattctc
gacaagctgtttaatgccataacatttgaggttggtcaggaaagtacggcacctcggtcc
agagctgtaaagaatgtgaggaggcacgcctgttcttccatcatcaaaatctgccgggat
tacccacagtacatcctgccttgttttgacttgttttacagtcacgtcaagaagttgctc
tcaagcaacgccacgctcactcacatggagaaatgttcgctgatggaatccctggtgctc
atcagtaaccagttcaaagactttgcaaagcagaaggcttttctagatgaactgatggct
tcagtggttacagactggacctctgatgagatgaggcaggtgctgtgtgaccctgctgtg
ttcctgtcctttgttggtgctgatcaggtggtcaatgagcaaagtcgcgaagcagagaca
gcgggccagaataggggccggctgggtttctgcttgtatgccatgttgggggtggtgaag
cgggcacgctggcctgcagacctggaggaagccaaggccggtggctttgtgatgggctac
accgctgctggagctcccatctacagaaacccttacacggcccagtttctggtcctgctg
cccaacctactggctctcatcaggactaacaacagtctgttcatgccggagaacacggct
cgtctgagtgagtctttctccagggcccatgaggtgatggagtctgacaaaaaggtggtt
cttggtctgtctcagcatatcctgggtattcatgactctcctgtgactagaaccaacctg
gaacggatgcagggctttttctccacactgtatgacaactgctttcatgtcctgggaaat
gcaggtcaggccttgcagcaggaattcttcaccattgagaacttgagcgaagaaatagct
ggttctgcgtttctgtccctcgaccatgtgcctgaccacagacttcgcccgatgattcgc
gtgttcctgaggcagttggtgctcgcgtgtcctcaggagtactacaacagtctactctgc
cccctgctcggacctctgtttgcctacatgcagcagagactcgatgccaagtggcaggtc
atcaaccagaggagctctgtcaacgatgaggaggaggaggcgctgtgtcaggagagccag
gtgacgcaggagattttggaggagcagctggtccgcctgctcagcagggaggtcctggat
cttctgactgtcagctgcatttcgaaaaaactgactgaaccagcagcaaataaggaggaa
gtagatgaggtcgacatgatggattcagtgcaggcggcgtctcctgcccagcccacagag
gagctgacggagctggggaaatgcctgttgaagcacgagaacatctacatgactctgctg
accctctccttcacctctctgtcatggaaggacaccactaactgtcaccgcacggcttca
atggtctgctggacgcttctgcggcaggtagttgggggcaatcttcttcgtgaggcggtc
atatggttctttaccagcgttcttagaggccttcagattcatgggcagcatgaggtctgc
aactctaccctctctcagctggcaatgctcatctatgaaaacctgcggcctcgatacgta
gagctgagagcggtgatgacccagatcccaaacatcagtgtggagacgctggaccagtac
gacaacaggctcatagaccccaatgcccagaagcttggagaaaagaagaggaaggaccag
ttcaagaggctgattgcaggaacagttgggaaagctctgtgccagcagttcaggaaggag
gttcacattcggaaccttcctttgctctttaaacagcccaagccagaacaagatgtaacg
agcagtgacgcatcgggcctggaagctctcttctccccagagaataagaccctgtag
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