Pseudoliparis swirei (Mariana hadal snailfish): 130207396
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Entry
130207396 CDS
T09868
Name
(RefSeq) ankyrin-3-like isoform X1
KO
K09259
ankyrin-3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130207396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130207396
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
130207396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
UPA_2
ZU5
ANK_LRRK2
Death
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
130207396
NCBI-ProteinID:
XP_056291953
LinkDB
All DBs
Position
17:complement(19034598..19170440)
Genome browser
AA seq
2206 aa
AA seq
DB search
MDIGFVFHLLRCVVDAEEIMTEFYLSDSNASYLRAARAGNLEKVLDYLKSGVEINICNQN
GLNALHLASKEGHVEVVAELLKLEADVDSATKKGNTALHIASLAGQTEVVKELVTNGANV
NAQSQNGFTPLYMASQENHLEVVRFLLEHSASQSMATEDGFTPLAVALQQGHDQVVSLLL
ENDTKGKVRLPALHIAARKDDTKAAALLLQNDHNADVESKSGFTPLHIAAHYGNINVATL
LLNRGAAVDFMARNDITPLHVASKRGNSNMVKLLLDRGSKIDAKTKDGLTPLHCGARSGH
EQVVEILLDRGAPFLSKTKNGLSPLHMATQGDHLNCVQLLLQHDVPVDDVTNDYLTALHV
AAHCGHYKVAKLIVDKKANPNAKALNGFTPLHIACKKNRVKVMELLLKHGASIQAVTESG
LTPIHVAAFMGHENIVNALTNHGASPNTTNVRGETSLHMAARAGQADVVGYLLKNRANVD
TKSKDDQTALHISSRLGKVDIVQQLLQCGASANAATTSGYTPLHLAAREGHQDVAVMLLE
NGASLSSSTKKGFSPLHVAAKYGKMEVASLLLQKRAAPDAAGKSGLTPLHVAAHYDNQRV
ALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIGTTLLEYGADTNAVTRQGISPIHLAAQ
EGSVDLVSLLLTKNANVNMCNKSGLTPLHFAAQEDKVKVAEVLLNHGADVDPQTKMGYTP
LHVACHYGNAKMANFLLQNHASANGKSKNGYTPLHQAAQQGHTHVINLLLQRGALANELT
VNGNTALSIARRLGYISVVDTLRPVTDESLTTMSASEKHKTNVPETMNEFLDMSDDEGED
ALTGDTDKYLRPQDLKELGDDSLPQEGYMGFSIGARSASLHSFSSDRSNTLNRSSYARDS
MMIEEILAPTKDTHLAVTGDYSSECVRRYSWTPDTMDHSHNTVASPIHSGLSSPLPQYDS
RFLVSFMVDARGGSMRGSRHNGMRIIIPPRKCTAPTRITCRLAKRHKLAYPPPMVEGEGL
VSRLVEVGPAGAQFLGPVIVEIPHFGSMRGKERELIVLRSDNGDTWKEHQSDARPQDLFE
LLTGMDEELDSPAELEKKRICRIVTTDFPQYFAVVSRIKQESSHMGPDGGLLSSSTVPMV
QASFPQGALTKKIRVGLQAQPVPDDVARAVLGNRATFSPIVTVEPRRRKFHKPITMTIPV
PPRSAEGHPVGQRGDAVPCLRLLCSITGGTSPAQWEDITGTTPLSFVTDCVSFTTNVSAR
FWLADCHQIPEMVSLASQLYRELICVPYLAKFVVFAKMNDVIEARLRCFCMTDDKVDKTL
EQQENFEEVARSKDIEVLEGKPIHVDCYGNLSPLTKSGQQLVFNFFSFKENRLPFNVKIR
DMGQEPCGRLSFLREPKSMKGLPQTAICNLNITLPTHKKDMESDPDDETEKPERRHTFAS
LALRKRYSYLTDPAASPQSPCERTDLRMAIVADHLGLSWTELAREMNFTVDEINHVRLEN
PNSLTAQSFMLLKKWVNREGKNATTDALTSVLTKVNRMDIVTLLEGPIFDYGNISGTRCF
ADDNAVFRDQADDYQSILAELQSPATLHSDPNFLEPELPVTPNPSLAHHQHHHHHDPEPD
TPLPACSQPQSLPWSPEIESDSPPRSPPRPCELALPAPVFVLPNPVPPKVIKPHIALNGQ
LLLSEEEDRYCQEMEFSHKPKSHSLPAMCELDIDMAYSTSSPSLSSVSSITPSSPDRPQM
RDGVQMDSPDVIQEDLCFKASEKEVTVDIEKVVKMFAAKLAEGNGFVEKWVEQDLIKNVE
RKCEMITKDRSKLENNILKEQKEGFAEEEMDVISHGNTGTTSEVEEHQHLIETGHEVGKG
CTSLEAEAVNETAEVQNVDGGSGERVYQEDTDEQLQFKDEDGLCGSERDMCGTTEGDQTP
KEQTVQAWVEALGERQPSESESNEEEGNRETQEAYQEEVEKEEGSEEKEENREMTKASVQ
ETLVQVEQAEKEVCSLSGWHSESPSVNVEPQTPGRSVSSELLDRRESQENSSDSVTSSSR
AESGRSRQNGNGSKHSPQDRSSDSSSGRKEEGALVSEKKVQQFSVDSSSQEEQTVTTRIF
TRRLIFKGEQAKNISGDSVTEEHYMDHDGNLISRKVIRKVIRRVSTHTPENQGGDRWHRG
LQHSPLLQEDGKEGQETAGERMTKDRGIKSYTHRDGCALPDVQEQG
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atggatattggctttgtttttcacctcttaagatgtgttgtggatgccgaagaaattatg
acagagttctacctgtctgacagcaatgccagttacctgcgagctgcccgagcaggaaac
ctagaaaaagtccttgactacctcaagtctggagttgagattaacatttgcaatcagaat
ggcctgaacgctctacatctagcctcgaaggaggggcatgtggaggtcgttgcggagctg
ctgaagctggaagcagatgtggattcagccacaaagaaaggaaacactgctctgcacatc
gcctcgctggccggacaaacggaagtcgtcaaagagctggtcacaaatggagccaatgtc
aacgcacaatcacagaatggcttcactcctctgtacatggcctcccaggagaatcacctg
gaggtggtacggttccttttggagcacagcgccagccagagtatggccactgaggatggc
ttcactcctctggcggtggcccttcagcagggccatgaccaggtggtctccttgctgctg
gagaacgatacaaagggcaaggtacgcctacctgccctgcacatcgctgcccgcaaggat
gacaccaaggccgcggccctgctcctgcagaatgaccacaacgcagacgtcgagtccaag
agtggtttcacccccctccacatcgcggctcactatggcaacatcaacgtggccacgctg
ctgcttaacagaggagctgctgtggacttcatggcgcggaatgacatcacaccgcttcat
gtggcttcaaaaaggggcaacagcaacatggtcaagttgttgctggacagagggtccaaa
attgatgcaaagaccaaggatggtctgacacctcttcactgtggggcgaggagtgggcat
gagcaagtggtagaaatcctactagaccgaggagctcctttcctgtccaagaccaagaac
gggctatcgccgctccacatggccactcagggggaccacctgaactgcgtccagctactg
ctccagcacgacgtgccggtggacgacgtcaccaacgactacctgacggcgctgcatgtc
gctgcccactgtggtcactacaaggtggccaagctcatcgtagacaagaaggccaaccca
aacgccaaagctctgaacggtttcactccgcttcacatcgcctgcaagaagaaccgagtg
aaagtgatggagctgttgctgaaacatggagcatctatccaggctgtcactgagtctggc
ctgacgcccatccacgtggccgccttcatgggccatgagaacattgtcaatgcactgaca
aaccacggagcctcgcctaacaccaccaacgtccgaggagagacgtctctccacatggca
gccagggcaggtcaggcagacgtggtcggatacctgctcaagaacagagccaatgtggac
acgaagtccaaggacgaccagacagcgttgcacatctccagtcggctggggaaagtcgac
attgtccaacagctgctgcagtgcggcgcctctgccaatgccgccaccacctcaggctac
accccccttcacctggctgcccgcgaaggacaccaagacgtcgccgtgatgctgctggag
aacggagcctctctctcctcctcgacgaagaaaggcttcagtccgctgcatgtggcagca
aagtacggcaagatggaggtggccagtctcctcctccagaagagagctgcgcctgatgct
gctggaaagagtgggctaactccactgcatgtagccgctcactacgataatcagagagtg
gcgctgctgctgctggatcagggagcttccccacacgctgccgccaagaatggctacacg
ccgctccacatcgctgccaagaagaaccaaatggacatcgggaccacgctgctggagtac
ggcgccgacaccaacgcagtcacgcggcaaggcatcagccccattcacctcgcagcacag
gagggcagcgtggacctggtgtccctgctgctcaccaagaacgccaacgtcaacatgtgc
aataagagcggactgacgccactccactttgcagcacaggaagacaaggtcaaggtggcc
gaagtccttctcaaccacggcgctgatgtcgacccacaaacaaagatgggttacactccg
ctgcacgtggcctgtcactatggcaacgcaaagatggcaaacttcctgctgcagaaccat
gccagcgccaatggcaaaagcaagaacgggtacactcctctccaccaagcggctcagcag
ggccacacccacgtcattaacctgctgcttcagcgcggggccctggccaacgagctcact
gtgaatgggaacactgccctatcaatcgcccgtcgccttggatacatctctgtggtggac
actctgaggcctgtgacggatgaaagcctgaccaccatgagtgcatcggaaaaacacaaa
accaacgttccagagaccatgaatgagttcctcgacatgtctgacgatgaaggtgaggat
gcattgaccggggacacggacaaatacctgcggcctcaggacctcaaagagctgggggat
gactccctcccccaggaggggtacatgggtttcagcataggagcccgctcagccagcctc
cactccttcagttcggataggtccaacacgctcaaccggagctcctatgcacgggacagt
atgatgatcgaagagattctggcgcccacgaaggacacgcacctggctgtgaccggagac
tacagctccgagtgtgtgcgtcgctacagctggactccggacaccatggaccacagccac
aacactgtggccagtcccattcactccggcctctcctccccgctccctcagtatgactcc
aggttcttggtcagcttcatggttgatgcccgcggcggctccatgagaggcagccgccac
aacggcatgcgcatcatcatccctcctcggaagtgcacggcgcccacgcgcatcacctgt
cggctggccaaaaggcacaagctggcctaccccccgcccatggtggagggagaggggctg
gtgagccggctggtggaagtcggaccagctggtgctcagtttctcggtccggtgattgtg
gagatccctcattttgggtccatgcgggggaaagagagggagctgattgtgttgaggagt
gacaatggtgacacgtggaaggagcaccagtctgacgccagaccccaagacctctttgag
ctgcttacgggaatggacgaagagctggacagtcctgccgaattggagaagaagcgcatt
tgccgcatcgtcaccaccgatttccctcagtattttgccgtggtgtcgcggatcaagcag
gagtccagccacatgggccctgacggaggcctgctgtccagcagcaccgtgcccatggtc
caggcctcgttcccacagggggcgctcaccaagaagatccgtgtgggcctgcaggcccag
ccggtgccagacgacgtggcgagggcggtccttggcaacagagccaccttcagccccatc
gtcactgttgagccaaggaggaggaagttccacaaaccgatcacgatgacgatccctgtc
ccgcctcgatcggcagaaggccatcccgtcggccagcggggcgacgctgtaccctgcctg
cggctgctctgcagcatcacaggagggacgtccccggcccagtgggaggacatcacaggg
accacaccgctgtcctttgtcaccgattgcgtctccttcaccacgaatgtgtcggccagg
ttctggctcgcagactgtcaccagattcctgagatggtgagtctagcgtctcagttatac
cgggagctgatctgcgtgccgtacctggccaagtttgtggtgttcgccaagatgaacgac
gtcattgaggctcgcctgcgctgcttctgcatgactgacgacaaagtggacaagaccctc
gagcagcaggagaactttgaggaagtggcccggagcaaagatatcgaggttctcgagggc
aagcccatccacgtggattgctatggcaacctgtcccctctcaccaaaagtgggcaacag
ctggtttttaacttcttctccttcaaggaaaacaggcttcctttcaacgtaaagatcaga
gatatgggccaggagccgtgtggccgcctctccttcctgagagagcccaaatccatgaaa
ggccttccacagactgccatatgcaatttgaatatcacactgccaactcacaagaaggat
atggagtctgatcctgatgatgagaccgaaaagccagaacgacgtcatacctttgcctcc
ttagctttgcgtaagcgctacagctatttgaccgacccagcagcgagtccccagagtcct
tgtgaacgaacagacttgcgaatggctatcgttgcagatcacctgggactcagttggaca
gagttggctcgggagatgaacttcacagtggatgagatcaaccacgtcaggcttgagaac
cccaattctctgacagcccagagcttcatgttacttaagaaatgggtcaatcgggaagga
aagaacgccacaacggatgccttaacttcagtgctgaccaaagtcaatcggatggatatt
gtgactttactggagggcccaatatttgactatggtaacatttcaggcacgagatgtttt
gccgatgataacgctgttttccgggatcaggctgatgattatcaaagcattctagcggag
ctgcagtcccccgccacactgcactctgaccccaacttcttggagcccgaactccccgtc
acccccaacccttcccttgcccatcaccaacaccaccaccaccatgacccagaaccagac
acacctttgccggcttgctcccagcctcagtccctgccctggagcccagagatagagtca
gacagcccccctaggagcccccccagaccctgtgaactggccctgcctgctccagtcttt
gtactccctaatcctgttcctcccaaggtcataaagccccacatcgctctgaacggccag
ctgcttttgagcgaggaggaggacaggtattgtcaagaaatggagttcagccacaagccc
aagtcacactccctccctgcaatgtgtgagttagacatcgacatggcttactccacatct
tccccttcactctcatcagtgtcatcaataaccccgtcatcgcccgacagaccacaaatg
agagatggagtgcagatggattcccccgatgtaatacaggaggatttatgtttcaaagca
agtgaaaaggaagtgacagtggacatagaaaaggttgttaagatgtttgcagccaaatta
gcggagggaaatggatttgtggaaaagtgggtcgaacaggacttaattaaaaacgtggaa
agaaaatgtgagatgataacaaaagatcggtctaaactggagaataacattttgaaggaa
cagaaggagggatttgcagaggaagagatggatgtaataagtcatgggaacacaggtacc
acctcggaggtggaggagcatcaacatctcatagaaactgggcatgaggtgggaaaaggt
tgtacttcattagaggcagaggctgtaaatgaaacggctgaggtccaaaacgttgatggg
ggcagtggggaaagggtctaccaggaagacacagatgaacaactgcagtttaaagatgaa
gacggcttgtgtggcagtgaaagagatatgtgtgggacaacagaaggggaccagacaccc
aaggaacaaaccgttcaggcctgggttgaggcacttggggagcgtcagcccagtgagtct
gaatccaacgaagaggagggaaacagagaaacacaagaggcatatcaagaggaggtggag
aaagaagaaggctcggaggagaaagaggagaacagagagatgaccaaggccagtgttcag
gagactcttgttcaggttgaacaagcagaaaaagaagtgtgttcactttcaggttggcac
agtgaatcacccagcgtcaatgtggaaccacagacgccaggccggagtgtcagctcagaa
ctgctcgacaggcgggaaagccaagagaactccagtgactccgtcacttcctcgtctcga
gccgaatcggggaggtcccgacagaatggcaacggctcaaagcactcacctcaggaccgc
tcgtcggactcatcgagtggcagaaaggaagagggagcacttgtgtcggagaaaaaagtc
cagcagttcagtgtagattccagttcacaggaagaacagactgtaaccaccagaatcttc
acacgccgtctcatttttaagggagaacaagcaaagaatatctcaggcgattctgtgacc
gaggaacactatatggaccacgatggtaacctcatcagtagaaaagtaatcaggaaggtt
attcggcgggtttctactcacacaccagaaaaccaaggaggtgacaggtggcaccgaggc
cttcagcacagtccccttctgcaggaagacggcaaggagggtcaagaaacagcaggcgaa
aggatgacaaaagatcgggggataaaaagctacactcatagggatggttgtgctctacca
gatgtacaggaacaaggttag
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integrated database retrieval system
