Pseudoliparis swirei (Mariana hadal snailfish): 130207410
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Entry
130207410 CDS
T09868
Symbol
vit
Name
(RefSeq) vitrin isoform X1
KO
K24506
vitrin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130207410 (vit)
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
130207410 (vit)
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GFIT
Motif
Pfam:
VWA
VWA_2
LCCL
DUF1194
Rxt3
New_glue
Tox-GHH2
Glycoprotein
Motif
Other DBs
NCBI-GeneID:
130207410
NCBI-ProteinID:
XP_056291983
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All DBs
Position
17:7006608..7027123
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AA seq
816 aa
AA seq
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MIRALLTAISLALLLSCACWAKPRGSKNKKPKQVVPAIDCDVRSGKINLPEFIAKCPAHC
KETKQQVYGTGVFASISSICNAAIHSGVITNTGGKVIVRKMAGQNIYKGSNSNGVRSLSL
PKWRESFVVSVGKPKKGVIYPSTLDYIPSRPTYVKTSQKEAKSPAATTALPTTTAPEPTT
TTTPEPTTTTLAPTTTTTTPPPTTTKPRAAVHKVRDAGSSHPYLASRQSQSEHGKRPSQV
FRGSPYPNRFQQRASAGTGLRRPEAGASIRRPSSPVGTAFNRVQPAAPERSPTMSQSNPA
FPRRDWAPPALTRPDWFPGARQSADVSYAAPDSGYKWSETDTPEVTARDHRPDISEYERW
FYNYGPYLPRSTDSDGNRRVPLDRTQTRVEPVDAWKLDTNPYGTGFNVREQEPTARAPEL
VSQGDPNCMVDLVFLMDGSWSIGKRRFKIQKDFLSEVAQVINVGVAGPMMGVIQYGDDPV
TEISLRSYSNSREVKSAIEKIGQKGGLSNVGKALSYIDTHYFSDANGNRGGAPNVAVVLV
DGWPTDKVEEASRLARESGINIFFVTIEGADDNEKQNLVEINFIDKAVCRTNGFYSMPVT
SWFALRKAVQPLVKRVCDTDRLLCSKTCLNANDIAFVIDGSSSVGTGNFRTVLQFVANIT
QEFEISDTDTRVGAVQYTYEQRLEFGFGQYNHKAELLNAIKRVSYWSGGTSTGAAITFAA
EKLFSKSKPNKRKIMIVITDGRSYDDVRVPALAVQRQGVIAYSIGIAWAAQDELEYIATD
PDKEHSFFVDEFDNLYKFVPKIIHNICQEFNSQPRN
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagcattgctcacggccatttctcttgcgctcctcctgtcctgtgcttgctgg
gccaagcctagaggatcaaagaacaagaaaccaaagcaagttgttccagccatcgattgt
gatgtcagatcagggaagatcaatctcccagagttcatagccaaatgtcctgcacactgt
aaggagacaaagcagcaagtctatgggacaggcgtgttcgcctccatctccagcatctgc
aacgcagccatccacagtggcgtcatcaccaacacgggaggaaaggtgattgtgaggaag
atggcggggcagaacatctacaaaggcagtaattccaatggagtacgctctctgtctcta
cctaagtggagggagtcgttcgttgtctcagtggggaagcccaagaaaggagtgatctac
ccctctactctggactacattccctcaagaccaacctacgtgaaaacaagtcaaaaggag
gccaaatcccctgcggccaccacagcgctgcctacgacaacagcacctgaacccaccacg
actacaacacctgagcccaccaccaccacactggccccgaccaccactacaactacacct
ccacccacgaccaccaaacctcgtgctgctgtccataaagttagggatgcaggcagcagt
cacccatacctcgcctcaagacagtctcagagtgagcacggaaagaggcccagccaagta
ttcagaggaagtccctatcccaatagattccaacaacgtgccagtgcaggaacaggactg
cgccgaccagaggcaggggcgtctatcaggagaccatcctctccagttggcacagctttt
aacagggttcagccggctgcgcccgagcgctctccaaccatgagccagtcaaaccccgct
tttcccagaagggattgggctcctccagcattaactcgtccggattggttccctggagct
cgacaatcggcagatgttagttatgcagctccagactcaggatacaagtggagtgagacg
gacacacctgaagttacagctcgggatcacaggcctgatatctcagaatacgagcgctgg
ttttataactatggaccgtacctgccgcgctccactgactcagatggcaaccgtagagtg
ccattggatagaacccagactagagtggagccagtggacgcttggaagttggacacaaat
ccttatggaacaggcttcaacgtcagggagcaggaacctacagccagagcacctgagctc
gtgtcacagggagacccaaattgcatggtagacctggtcttcctgatggatgggagctgg
agcattggaaagaggcgctttaagatccagaaggacttcctgtctgaggtggctcaggtc
atcaacgtgggtgtggccggacccatgatgggcgtcatccaatacggggatgaccctgtg
acagagatcagtctgaggtcctactccaactccagggaggtgaagtcagccatagaaaag
atcgggcagaagggaggcctctccaacgtcggaaaggccctctcctacatcgacacgcac
tacttcagcgatgccaatggaaaccgaggaggggctcccaacgtcgccgtggtgctggtg
gacggctggcccacagacaaggtggaggaggcgtcccggctcgctcgcgagtctggcatc
aacatattcttcgtcaccatcgagggcgccgacgacaacgagaagcaaaacctggtcgag
atcaactttattgacaaggctgtgtgtcggaccaacggcttctactccatgcccgtgacc
agctggtttgccctgaggaaggccgtgcagcccctggtgaagagggtgtgcgacacagac
cgcctcttgtgcagcaaaacctgcctcaacgccaacgacatcgccttcgtcatcgacggc
tccagcagcgtgggaaccggaaacttccgcacggtgctgcagtttgtggccaacatcacg
caggagtttgagatctctgacaccgacacgagggtcggagcggtgcagtacacctacgag
cagaggctggagttcggcttcggccagtacaaccacaaggccgagctgctgaacgccatc
aagcgcgtcagctactggagcggcgggacgagcaccggcgctgccatcaccttcgccgcg
gagaagctcttcagcaaatccaaacccaacaaacgcaagatcatgattgtcatcacagat
ggccgctcctatgatgacgtcagagtacctgcactggctgtccaacgtcaaggtgtgatc
gcctactccatcggcattgcctgggcagcccaggacgagctggagtacatcgccacggac
cccgacaaggagcactccttcttcgtggacgagttcgacaacctctacaaatttgtaccc
aagatcatccacaacatctgccaggagttcaactcccagccccggaactga
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