Pseudoliparis swirei (Mariana hadal snailfish): 130207436
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Entry
130207436 CDS
T09868
Name
(RefSeq) calpain-2 catalytic subunit-like isoform X1
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
pswi04210
Apoptosis
pswi04217
Necroptosis
pswi04218
Cellular senescence
pswi04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130207436
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130207436
04217 Necroptosis
130207436
04218 Cellular senescence
130207436
09144 Cellular community - eukaryotes
04510 Focal adhesion
130207436
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130207436
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
130207436
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C2: calpain family
130207436
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
130207436
NCBI-ProteinID:
XP_056292020
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All DBs
Position
17:complement(9173607..9182369)
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AA seq
700 aa
AA seq
DB search
MTSTADRLAHQKEREEGIGTNQNAVKFAKQDYVTLRQQCLERGRLFEDNCFPAESKSLGF
KELGPYSSKTRNVVWKRPTELCSNPKFIDDGATRTDICQGALGDCWLLAAIASLTLDQRI
LARVVPHGQSFTEGYAGIFHFQFWQFGEWVDVVVDDRLPTRDGKLLFVHSAEGSEFWSAL
LEKAYSKVHGCYEALSGGNTIEGFEDFTGGIAEVYPLDEAPTKLFHIMQRALSLGSLLGC
SIDITNAYETEAITALKLVKGHAYSVTGAEEVCFGGRPVQLVRMRNPWGQVEWTGPWSDG
SSEWKHVDEDEKAKLNHVADDGEFWMSYSDFIKQFSTLEICNLTPDTLMSDDVGHWNNYQ
FEGMWRVGSTAGGCRNFQATFSSNPQFVVRLEDVDDDPLDGEDGCTFLVGLMQKDGRRQK
RLDRNLETIGFAIYEIPDQYKGCSNVHLGPDVLLRQRAVARSSSFINTREVCDRFKLPPG
EYAIVPSTFQPHKKGSFVLRVFSEKKAATSPLEVDINAQIEEEEVSENDVDPDFKKLFKQ
IAGNDMEVSVFELVTILNNVVSHRSDIKTDGFSLETGRLIVSLLDKDESAMLGLLEFHLL
WRKIQKYLEIFKTFDTDNSGTMSSHEMRGAAAEAGFQVNNAVLQSIVNRYADAQYAIDFD
NFVGCLIKLEMLFKIFKALDRADKGKMELDIQQWLCLAIY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacatccacggcagaccgactggctcatcagaaggagagggaagaaggcattggcact
aaccagaatgcagtgaagttcgccaaacaggattatgtcaccctgcgccagcagtgtctg
gagcgtggacgtctgtttgaggacaactgctttccagctgagtccaaatcactgggcttc
aaagagctgggaccatactcatccaaaaccaggaacgttgtttggaaaaggccaacggag
ctgtgctccaacccaaagttcattgatgatggggcaacgaggacagacatttgtcaagga
gctctgggggactgctggctcctggctgcaatcgcctctctgactcttgaccagcggatc
ctggctcgcgtggtgccccatggacagagtttcaccgagggttatgccgggatatttcac
ttccagttctggcagtttggtgagtgggtggacgtggtggtcgatgaccgtttacccacc
agagatggaaagcttctgtttgtccattcagcggagggctcagagttttggagcgccctg
ctggagaaggcctactccaaggtgcatggctgctatgaggcactgtcaggaggaaacact
attgaaggttttgaggacttcacaggagggattgcagaagtatatcccttagacgaagct
ccaacgaagctcttccacatcatgcagagggccctgagcctgggctcactgctgggttgc
tctatagacatcaccaatgcctatgagacagaggccattacagctctcaaacttgtcaag
ggacatgcatactcagtcactggagcagaggaggtttgtttcggaggcaggccggttcag
ctggtccgcatgaggaacccatggggtcaggtggagtggactgggccttggagtgatgga
tccagtgaatggaagcacgtcgatgaagatgagaaagcaaagttgaatcatgtggctgac
gatggggagttctggatgtcctattccgacttcatcaagcagttctccacgctggagatc
tgtaacttgaccccagacacgctcatgagtgatgatgtgggccactggaacaactaccag
tttgaagggatgtggagggtgggatccacggctggcggctgccgcaacttccaagccacg
ttctcgtccaaccctcagtttgtggtgcgtctggaggatgtcgacgatgatcctctggat
ggggaggatgggtgcaccttcctggtggggctgatgcaaaaggatggacgacggcagaag
aggcttgaccgcaaccttgaaaccattggttttgccatttatgagatcccagaccagtac
aaaggctgcagtaatgttcacctcggtccggacgtcctgctgcgacagagagctgtggct
aggagcagcagcttcatcaacacgcgggaagtgtgcgaccgcttcaaacttcctccagga
gaatatgcaatagttccctcgaccttccagcctcacaagaagggcagctttgttctcagg
gtgttctcagagaaaaaggctgcaaccagtccacttgaggtggacatcaatgctcaaata
gaagaggaggaagtatctgagaatgatgtggatcctgatttcaagaagctcttcaagcag
attgctggcaatgacatggaggtatcggtctttgaactggttacaattttgaacaacgtt
gtctctcatcggtctgatatcaagacagacggcttcagccttgagacaggtcggcttatt
gtcagtctgctggataaagatgaaagtgccatgttgggattgctggagtttcacttgctg
tggcgcaaaatccagaagtacctggagatcttcaagacttttgacacagacaactctggc
accatgagctcccacgagatgagaggcgcagctgcagaagcaggtttccaggtcaacaat
gctgtgttgcagtccatcgtgaatcgctatgccgatgctcagtacgccatagactttgac
aactttgttggctgtctcattaaactggaaatgctcttcaaaatatttaaggctctggat
agagctgacaaagggaagatggagctggatatacagcagtggctgtgcctggcgatctac
tga
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