Pseudoliparis swirei (Mariana hadal snailfish): 130207461
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Entry
130207461 CDS
T09868
Symbol
fbxo28
Name
(RefSeq) F-box only protein 28
KO
K10306
F-box protein 28
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130207461 (fbxo28)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130207461 (fbxo28)
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GFIT
Motif
Pfam:
FAM76
F-box
FliD_N
FapA
DUF2730
Motif
Other DBs
NCBI-GeneID:
130207461
NCBI-ProteinID:
XP_056292065
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All DBs
Position
17:3819448..3828235
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AA seq
381 aa
AA seq
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MAAVVERVDGCFGSLDSDAVSPGQWSPPPDQQHQNNPLLGLPIVAVETVLHFLSYDEISL
LRSVSKCMDFICQRVLNQGFLKVERYHSLCQRQVKAQLPRRESERRNHSLARHADILAAV
ETRLSLLNMTFMKYVDSNLCCFIPGKVIDEIYRVLRYVNSTRAPQRAHEVLQELRDISSM
AMEYFDEKIVPILKKKLPGADLSGRLIGSTQVAGPSTSLTTMSLLAKNTPSRSEMTKVQQ
QVKVNGASMTVLRREMQEIRVKQLEQQKQLQDQEQKLLEQTQVIGEQNARLAELEHKLRE
LMDSSAAAAAAAMGGPGPAAAVASGGSSSAAVSSTVAGGGGGAVPAASLSREPEGERWLS
LKRARKHSDLPRQSKRLRSKK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcgtagagcgagtcgatggctgcttcgggtccttggactcagacgcggtg
tcgccgggacagtggtcccctccgccggaccagcagcaccagaacaacccgctgctgggt
ctgcccatcgtggccgttgagaccgttctccatttcctctcgtacgatgaaatcagcctg
ctgcgctcggtgagtaagtgcatggacttcatctgccagcgcgtcctgaaccagggcttc
ctgaaggtggagcggtaccacagtctgtgccagaggcaagtcaaagcccagctgcccagg
cgggagtctgagaggagaaaccactcgctggcccgccacgctgacatcctggctgccgtg
gagacgcgcctctctctgctcaacatgaccttcatgaaatacgtcgactccaacctctgc
tgcttcatccccggaaaggtgatcgatgagatctaccgcgtgctgcgctacgtgaactcc
actcgagcgccgcagcgagctcacgaggtcctgcaggagctgagggacatctcctccatg
gccatggagtacttcgacgagaagatcgtccccatcctgaagaagaagctgccgggcgcc
gacctgtccggccgcctcattggctcgacgcaagtggcaggtccatccacctccctgacc
accatgtccctgctggccaagaacacgccgtcgcgctccgagatgaccaaggtgcagcag
caggtgaaggtgaacggggcgtcgatgacggtgctgcggcgcgagatgcaggagatccgg
gtgaagcagctggagcagcagaagcagctgcaggaccaggagcagaagctgctggagcag
acgcaggtgatcggcgagcagaacgcccgcctcgccgagctggagcacaagctccgcgag
ctgatggacagcagcgccgccgccgccgccgccgccatggggggtcccgggcccgccgcg
gccgtcgcatccggcggcagcagcagcgccgcggtgtcctccaccgtggccggcggcggc
ggtggcgccgtgcccgccgcctctctctccagagagccggagggcgagagatggctgtcg
ctcaaacgcgcccgaaagcactcggaccttccgcgacagtccaaacggctgcgcagcaag
aaataa
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