Pseudoliparis swirei (Mariana hadal snailfish): 130207471
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Entry
130207471 CDS
T09868
Symbol
arfgef3
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 3
KO
K17572
brefeldin A-inhibited guanine nucleotide-exchange protein 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130207471 (arfgef3)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130207471 (arfgef3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIG2_C
DCB
Sec7-like_HDS
TPR_TTI1_N
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
130207471
NCBI-ProteinID:
XP_056292080
LinkDB
All DBs
Position
17:21287479..21329745
Genome browser
AA seq
2212 aa
AA seq
DB search
MEEILRKLQKDASGHKHKALRDACVYARETLESHNGSAKISKIPASQLRERCLLPLQMAL
ESKNTKLGQAALTGMQKLLCEDRLVGGVGVESEALEKQLLSQMLEAIRVTPSLHEDLQVE
VMKVLLCITYSPNFDINGDSILRIAEVCIQTYVSSCHQRSINTAVRATLSQILGDLTLQL
RHRQEGEDGDEVTAPPLHRRDISPTSQALCEDVVTVLTVFCERLESVDSENQLLQLLYLE
CILSMLSSCPPTMHLSRGFGDLVWKQLCPSLVAIMGNPANDKTIASHHGYTGASDRLSDR
HGLGFSQELDSFGGGVSDQGRGSGCSSSAPARIAPVVRTVCYVAAELVRLVNCVESMKPV
LQSLYHRILLYPPPQHRTEAIRIMKEILGSPQRLYDLAGPCVAEPETRKRSFSKRKSHLD
LLKLVMDGMTEACVKGGIEACYSSVSCACALLGALDELSHGRGIQPEQARLLLRRLEDLK
DAAESTRESLEINEADFRWQRHILSSEHGAWDAGASSSAHAAATERSPDISISITTETGQ
TTVDLEAGELGHAAPEDEREENQGSQREEGGGGGGDIGGEERGGVVPPPDVVQRSHDLVH
PDITNFLSVESRTRSHHGGGSRYSESNFSVEEQDLSRTEFDSCDQYSMAAEKDSGRSDVS
DIGSDNVSLADEEQQTPRDCPGHRSLRTAALSLKLLRNQEADQQSARLLVQSLAALLPRL
LGLPGAAQVDQSLQNFSSGFCSGLQAGGIHSPGFEAGDTLSCQSLMNADGLYLVSYYALL
LNLKLCCCDYYQRRALAPDLGLKEFVRLIQSSGVLVVLSQAWIEELYNQVLERNLLGEAG
YCGAPEDHALPLITVLTDIDGLGSSAIGGQLIRRASNQSPLSVDKAGSDTVMAGAVFSRF
VLTGVWKNLMDVLSTPLTGRMAGSSKGLAFILGAEGVKEQSQRERDTICLSLDGLRKAAA
LSCALGVAANCASALAQMAAASCVQEEKEEKEVGEMGDAIAQVKQRVEHRLEQIGRPQGV
RLHTAHVLCMDAILNVGLEMGSHNHDCWPHVFRVTEYISSMEHTHFSDAASQPSSLTTIT
QQSQQAVDLGMELSCEPSPEASELGLSQPVIQPLSIQELLRESSRGRGLDLKSGSLMTGT
SAAKAVCTLSTQADRLFEEAATKLNLVGLVGFLQQLRKASQSQLFDSVTETGDYSLAMPG
EAKSTLDRRSALHLFRLGEAMLRIVRNRNRPLLHVMRAWSVVAPHLVEASCHKERRVSQK
AVSFLHDVLTEVLSSWAEPPQFHVNEALFRPFEHIMQLELCDEDVQDQVITSIGELVEMY
SPQILSGWRPLFSALRTVHSSKTDTKEYLLGEYSMGKSQAPVFDVFEAFINTDNIQVFAN
AATDYIMCLMKFVKGLGEVDYREIGDCVHPSGFSSTDLCLPALDYLRRCSQLLAEIYKMQ
NKPVFLGARLASLPMRSQERSISTENGMDCVLQEFDDDTGLIQVWILLLEQLTAAVSNCP
RQHQPPTLELLFTLLRGLIDVPGPGFAIFSVIQLLLPVMALWLQRSHGDHSYWDVAAANF
KHAIGLCCELVVEHVNSFIHTDVGYESLINLMLKDLFKLLVACVSEPAETISRVGCSCIR
YVLVTVGPVFTEEMWRLACCALQDAFSATLEPVKNLLACFHSGSDSFSGDACEVKVAAPS
HSPAAEAEYWRIRAMAQQVFMMDTQCSPKTPNNKEGFEHAQSCLLIIELPADQQANGHAQ
KRIPFRTIVVSLLSHQVLLQNLYDILLEEFVKQPEGYEKVTPVTSDPGRATVGFLRYISM
TNLAIILDLLLDSYRTARDFDTRPGLKYLLMKVSGVSGAANLYRQSAMSFNLYFQALLCA
TLSQDDGMTAQQVKRMLYEEEEGSSDSSLPGSASSEDEDIFEETAQVSPPRGRDKRHHWR
APVPSLGVQPLSGADWAWLVRRLSKLCMDLCSSYIQMHRDLESTLEEMALQRGAGGGGGG
GGGGGLFQSENSTPTSAGGLSAKGTPSEEGGYRREAGLGDNGRLRGRSSGGGAGPGRRKE
WWESAGNKLYTIATDKTISKLMVEYKRRKQQQPPPQSHVNLFMKEQGRAAGERRGPVERP
QHLVDQQVAPLRHSVSAGPEVLRKEKRPRSGSNISSHSISMRDSEAQIQAWTSMVLTLLN
QVLLLPDSAFLALQPALFPCLSQLSCHVADGRVRQALRDWLGRVGRLYDITG
NT seq
6639 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatcttgcgaaaactgcagaaagacgcgtccggccacaagcacaaagctctg
cgcgacgcctgcgtctacgcccgcgaaactctggagtctcacaatggatccgccaagatc
tccaagatccccgcctcacagctccgagagcgctgtctgctgcctctccagatggccctg
gagtctaaaaacaccaaactgggccaggcggcgctgactgggatgcagaagctcctgtgt
gaggacaggttggtgggcggtgtcggcgtggagtcggaggccctggagaagcagctgctc
agccagatgctggaggccatccgagtcacgccatccctccatgaagacctgcaggtggag
gtcatgaaggtcctgctgtgtatcacctactcgccaaactttgacatcaacggagactcc
atcctccggatcgccgaggtgtgcatccagacctacgtgtccagctgtcaccagcgcagc
atcaacacggcggtccgagccacgctgagccagatcctgggagacctgacgctgcagctg
agacacagacaggagggcgaagatggagacgaggtcacggcgccgccgctgcacaggaga
gacatctctcccaccagccaggctctgtgtgaagacgtggtgacggttctgacggttttc
tgcgagcggctggagtcggtggacagtgagaaccagctcctgcagctcctctacctggag
tgcatcctctccatgctcagcagctgccctcccacaatgcacctgtccagagggttcggc
gacctcgtgtggaagcagctgtgtccgtccctcgtggcgatcatgggaaatccagccaac
gacaaaaccatcgcttcccaccacggctacacgggcgcgtccgaccgcctctcggacaga
cacggtctaggattcagccaggagctggactccttcggaggaggggtgtccgatcaaggc
agagggtccggctgctcctccagcgcccccgccaggattgcgccggtagtgcgcaccgtg
tgctacgtggccgcggagctcgtgcgtctggtgaactgcgtggagtccatgaagccggtg
ctgcagtcgctgtaccacaggatcctgctgtacccgcctccccagcaccgcaccgaggcc
atccgcatcatgaaggagatcctgggcagtccccagcggctgtacgacctcgccggtccg
tgcgtggcggagcctgaaaccaggaagcgctccttctcaaagaggaagtcccacctggac
cttcttaaactagtgatggacgggatgacggaggcctgcgtgaagggcggcatcgaggcg
tgctactcgtcggtctcctgcgcctgcgctctcctcggggcgctggacgaactgtcgcac
ggccgcggcatccaacccgagcaggctcgacttctcctccgacgcctggaggacctgaag
gacgcggcggagtcgacgcgcgagtccttggagatcaacgaggccgacttcaggtggcag
agacacatcctgtcctctgagcacggcgcctgggacgccggcgcttcttcctccgcccac
gcggccgccaccgagcgcagccccgacatcagcatcagcatcaccacggagacgggccag
accaccgtggatctggaggcgggggagctcggccacgctgctcccgaggacgaacgcgag
gagaaccaggggagccaacgggaggagggaggaggaggaggaggagacatcggtggggag
gaaagaggaggtgtggttcctcctccagatgtggtgcagcgaagtcacgaccttgtccac
cccgacatcaccaacttcctgtctgtggagtccaggaccaggtcccaccacggggggggg
tcacgttacagcgagagcaacttcagcgtcgaggagcaggacttgtcgcgcacggagttc
gactcgtgcgaccagtactccatggcggcggagaaggactcgggccgctccgacgtgtcg
gacatcggctccgacaacgtgtcgctggcggacgaggagcagcagacgcctcgcgactgc
ccgggccaccgctccctgcgcaccgccgccctgtcgctcaagctgctgcgcaaccaggag
gcggaccagcagagcgcccggctgctcgtccaatcgctggcggcgctgctgccccgcctg
ctggggctgcccggcgccgcccaggtggaccagtcgctgcagaacttctcctccggcttc
tgctccgggctgcaggccggtgggatccactccccggggttcgaggccggtgacacgctg
agctgccagtccctgatgaacgccgacggcctctacctggtgtcgtactacgccctcctg
ctcaacctcaagctctgctgctgcgactactaccagcggcgagcgctcgcccccgacctc
ggcctgaaggagtttgtgcgtctgatccagagcagcggggtcctcgtggttctctctcag
gcctggatcgaggagctctacaatcaggtgttggagcgcaacctgctgggcgaggccggg
tactgcggcgccccggaggaccacgcgctgccgctcatcaccgtgctgacagatattgac
ggtctgggcagcagcgcgatcggaggtcagctgatcaggagggcgtccaaccaatcgcca
cttagcgttgacaaggccgggagtgacactgtgatggcaggggccgtgttctctcgcttc
gtcctcaccggcgtgtggaagaacctgatggacgtgctgtccacgccgctgacgggccgc
atggcgggcagctccaagggcctggcgttcatcctgggggcggagggggtcaaggagcag
agccagagggagagggacaccatctgtctgagtctagacggcctccgcaaggcggcggcg
ctcagctgcgctttgggtgtggctgccaactgcgcctcagcgttggcccagatggctgca
gcgtcgtgtgtgcaggaggagaaggaggaaaaggaagtgggagagatgggcgacgccatc
gcacaagtgaagcagcgcgttgaacatcgtctggagcagatcggccgtcctcagggcgtt
cgcctccacacggctcacgtgttgtgtatggacgccatcctgaacgtaggactggagatg
ggtagccacaaccacgactgctggccacacgtcttcagggtgactgaatacatcagttca
atggagcacacccacttcagcgacgccgcctcgcagccgtcctccctgaccaccatcacc
cagcagagccagcaggcggtggacctggggatggagctgagctgcgagcccagcccggag
gcctcggagctgggcctcagccagccggtgatccagcctctgtccatccaggagctgctg
agggagagcagcagaggccggggtctggacctgaagagcggcagcctgatgaccgggacc
agtgctgccaaggctgtgtgtacgctgtcgacgcaggcggacaggttgtttgaagaagca
gctaccaagctgaacctggtgggtctggtcggcttcctgcagcagctcaggaaagcgtct
cagtcccagctgttcgactctgtgactgagaccggagactattcactggcaatgccagga
gaggccaagtcgaccctggaccggcgcagcgctctccatctcttccgcctgggcgaggcc
atgctgaggatcgtcaggaacaggaaccgccctctgctccacgtcatgagggcctggagc
gtggtggcgccccacctggtggaggcttcgtgtcacaaagagcgccgcgtgtcccagaag
gccgtgtccttcctccacgacgtcctgacggaggtgctgtccagctgggcggagccgcct
cagttccacgtcaacgaggctctgttccggcccttcgagcacatcatgcagctggagctg
tgcgacgaggacgtccaggaccaggtgatcacctccatcggcgagctggtggagatgtac
tcccctcagatcctgtctgggtggaggcctctgttcagcgctctgaggaccgtccacagc
agcaagacggacaccaaggaatacctgctgggggagtactccatggggaagtcccaggct
ccggtgttcgatgtctttgaggcgttcatcaacaccgataacatccaggtgtttgccaac
gcggccaccgactacatcatgtgcctcatgaagttcgttaaaggcttaggagaagtggac
tacagggagattggagactgtgtccatccgtcgggcttcagctccactgacctctgcctg
cctgctctggactacctccgcaggtgttcacagctgctggccgagatatacaagatgcag
aataagccggtgttcctgggggcgcggctcgccagcctgccgatgaggtcgcaggaacgc
tccatcagcaccgagaacgggatggactgcgtcctgcaggagttcgacgacgacacgggt
ctgatccaggtgtggattctgctgctggagcagctcacggcggcggtgtccaactgcccc
cggcaacaccagccgccgaccctggagctgctgttcacgctgctgcgggggctcatcgac
gtgccaggtccgggcttcgccatcttctccgtcatccagctgctgctccccgtcatggcg
ctgtggctgcagcgtagccacggcgaccactcctactgggacgtggccgccgccaacttc
aagcacgccatcggcctgtgctgcgagctggtggtggagcacgtcaacagcttcatccac
acggatgttgggtacgagtctctgatcaacctgatgttgaaggacctgttcaagctgctc
gtggcgtgcgtgtccgagccggcggagacgatctccagagtcggctgctcctgcatcagg
tacgtcctggtcacagtgggtccggtgttcacggaggaaatgtggaggttggcctgctgt
gctctgcaggacgccttctctgctacattagagcctgtcaagaacctcctggcgtgtttt
cacagcggttcggacagtttctctggggacgcctgcgaggtgaaggtggcggctccgtcc
cactcccctgcagccgaggccgagtactggaggatcagagccatggctcagcaggtcttc
atgatggacacccagtgctccccgaagacgcccaacaacaaggagggcttcgagcacgct
cagtcgtgcctcctgatcatcgagctgccggccgaccagcaggccaacgggcatgctcag
aagaggatcccgttccggaccatcgtggtgagcctgttgtcgcaccaggtcctgctccag
aacctctacgacatcctgctggaggagttcgtcaagcagcccgaaggctacgagaaggtc
acgcccgtgacctctgaccccggccgggcaaccgtgggcttcctgcgctacatctccatg
actaacttagccatcatcctggatctgctgctggactcgtacaggacagcacgggacttt
gacacccggccgggtctgaagtacctgctgatgaaggtgtcgggtgtctccggggcggct
aacctttaccgccagtcggccatgagcttcaacctgtacttccaggccctgctgtgtgcc
acgctgagccaggacgacggcatgaccgcacagcaggtgaagaggatgctgtatgaggaa
gaggaggggagctctgactcttctctccctggctctgcttcgtcagaagatgaagacatc
ttcgaagaaacagcacaggtcagccccccccgcggccgggataaacgtcaccactggcgg
gcgcccgtcccgtctctcggcgtgcagccgctgagcggcgccgactgggcgtggctggtc
aggcgcctctccaagctgtgcatggacctgtgcagcagctacatccagatgcaccgcgac
ctggagagcacgctggaggagatggcgctgcagagaggagcaggaggaggaggaggagga
ggaggaggaggaggactcttccagtccgagaattccactccgacttcggccggcgggctg
tcggcgaaggggacgccgtcggaggaaggcgggtacaggcgagaggcgggactcggggat
aacgggcggctccgtgggaggagctccggcggcggcgccggacccgggaggagaaaggaa
tggtgggaaagcgccgggaacaaactgtacaccatcgccacggacaagaccatcagcaag
ctgatggtggagtacaaacgcaggaaacagcagcagccgccgccgcagagccacgtcaac
ctgttcatgaaggagcagggccgggcggcaggggagaggaggggccccgtggagaggccc
caacatctcgtggaccagcaggtggccccgttgaggcactcggtcagcgccgggccggag
gttctgaggaaggagaagaggccgcgatcaggatcgaacatcagctcccacagcatctcc
atgagggactctgaggctcagatacaggcgtggaccagcatggtcttgactctcctgaat
caggtcctcctcctgcccgactcggcgttcctggcgctccagccggcgctcttcccgtgc
ctcagccagctctcgtgccacgtggccgacggccgcgtccgccaggcgctgcgcgactgg
ctgggccgcgtcggccggctctacgacatcaccgggtga
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