Pseudoliparis swirei (Mariana hadal snailfish): 130207486
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Entry
130207486 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: regulating synaptic membrane exocytosis protein 1-like
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130207486
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
130207486
Small GTPases and associated proteins
Rab associated proteins
130207486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
Zn_ribbon_Nudix
Zn_ribbon_recom
IBR
Motif
Other DBs
NCBI-GeneID:
130207486
NCBI-ProteinID:
XP_056292096
LinkDB
All DBs
Position
17:complement(5797371..5894867)
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AA seq
1501 aa
AA seq
DB search
MFASVGPRGGPRPTVTPAILEPDLSHLTEDERKIIMAVLARQREEEAKEEAMSKEEKPIQ
ARTVNLVGQKKPQQNDVRGIQQQLSSYRETVIRQATVAAGSTLHRDDAPTCGICHKTKFA
DGCGNLCSYCQTKFCARCGGRVSLRSNTEDKVVIWVCNNCRKQQELLTKPGEWFTGPAGK
LAGLGSAVSEPSVCQTIGDKKLRSRSQAPPGTTAAIQDPNRPGVPGAAPSADTRSRSEPP
RDARNGRGGGEAGRGERRPGQPRLQTQVSMDRHLRGDSRERRESRRLSKGRSLEHDPVGG
AGGVRRTVEGGYHHMDYSGAPPRHAGPVPPGGRGHPAPAQGRGGGVGGEAGDGVRPGQRT
AGGVAGPHEHTLAQQPLPPELREPSGSAPGQGPVVRRTKREKAESMLRNDSLSSDQSESL
RPPPPRPYKSKRGMGAGGKRQTSVSSSEEEGGTTPEYSSCEDGEIESVSERGDWECYPHD
PTVWHHPVTWQPSKEGDHLLGRITLSKRSAAMPKEAGALLGLKVVGGRITESGRLGAFIT
KVKKGSLADVVGHLRAGDEVLQWNGKLLPGATMKEVYNIILESQAEPQVELLVSRPIGVF
RKYHDIPRIPDTSHPPLESTGSSSFESQKMERPSLHVLSPSSPGMLQDQDAPQLMPGQLS
VKLWYDKVGHQLMVNVQLATELPLRPDGRPRSPYVKMYFLPDRSDKSKRRTKTMKRTCEP
KWNQTFVYPHVHRRDFRNHMLELTIWDQPRSPDEDSTFMGEILIELETALLDDKAHWYPL
QTHDVSSIPLPRPSPFLPRRHTDAPGKKLQRSQRVTEPEFDEGTAVMSKAADGRGRERQR
ESTSTLEVPDQQRTPALHIRSRSVSPHREDQGRTRSRPPNVPAQRSLDDELPHARRSRSP
TRHYDTARGRHQEEYLDDSEVIMIHXSMRGKSAECLHTRRSPRPNNTLPPKMPLLFHGTH
THTNSDLQPSLDRVRSASANCLTPDYHAPSSETERTSLSHSLPRRRPASPRILIQHASPE
DDRQPRTPETPECHAVGRKLPDSGRGHLQGGASLSSSVTSSSARRVRQLPQLPPKSSTVE
QALVAEECVRQLQMRVHSNRASAAATSSQHDLDRALKIKRELYKDQRRSSENASHKSSDS
DVSDVSAISRTSSASRISSTSYMSIQSERPRGRFRAMRATGRHMMKSTSVSGEIYGTEHA
DGSQSDTALGSLGSGIKKRRSSLSQRVVAILPSRRSRSTSQLSQTEAAGKATQRQKEAPA
GKKVGKGGSSIQRSVETGMAVEYPRGGSTMNRQASRESTDGSMNSYSSEGNLIFSGMRLG
ADSQFSDFLDGLGPGQLVGRQTLATPAMGDVQIGLMDKKGQLEVEVIRARGLTSKPGSKS
LPAPYVKVYLLDNGTCKAKKKTKIARKTLEPLYQQQLLFEESPQGRVLQVIVWGDYGRLD
HKCFMGVAQILLEELDLSSTVIGWYKLFPPSSLVDPTLAQLTRLASQTSLDSSGPPPGVR
S
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcctcggtgggccctcggggcggcccgcgcccaacggtcaccccggcaatcctg
gagccggacctgagccatctgacggaggatgagaggaagatcatcatggctgtgctggct
cggcaacgggaggaggaggcgaaagaggaggccatgtcaaaagaagagaagcctatccaa
gcaagaacggtgaacctggttgggcagaagaaaccgcagcaaaatgacgtccgaggaatc
cagcagcagttgtccagctacagggagacggtgattcgacaggccacggtggcggcaggc
tcgaccctccaccgggacgacgcgccgacctgtggcatctgccacaagaccaagtttgca
gacggctgcgggaacctgtgctcgtactgccagaccaagttctgcgcccgctgcgggggg
cgagtgtcgctacgatccaacacggaggacaaagtggtgatctgggtgtgtaataactgc
cgaaagcagcaggagctcctgaccaagccgggcgagtggttcaccggtccggccgggaag
ctcgccggcctcggttcggccgtcagcgagccgtctgtgtgccagacgatcggcgacaag
aagcttcggtctcgctcccaagcgcctccaggcaccaccgccgcgatccaagaccccaac
cggcctggcgtgcctggggccgcgcccagcgccgatacccggtcacgtagcgagccgcca
cgagatgcgagaaatggaagaggaggcggagaagctggtcggggagagcgtcggccgggt
cagcccaggctgcagacccaggtctccatggaccggcacctccggggggattccagggag
cgacgggagagccggcggctgtcgaagggccgctctctggagcacgaccctgtgggagga
gccggcggggtaaggcggacagtagaggggggctaccaccacatggactacagcggggcc
ccccctcgccatgcagggccggtcccacctggaggccggggccaccctgcgcccgcgcag
ggtcgcggcgggggagtgggaggggaggccggggacggcgtgcggcccgggcaaaggacg
gcgggtggggtcgccgggccacacgaacacaccctcgcccagcaacccctcccccctgaa
ctcagagagccttccggctcggcccccggccaggggcccgtggtgagacggaccaaacgg
gaaaaggctgagagcatgctgcgcaatgactcgctgagctccgaccaatcggagtccctg
cgcccgccgccgccgaggccctacaagtcgaagcgggggatgggcgctggggggaagagg
cagaccagcgtcagcagttcggaggaggagggagggaccacgcccgagtacagcagctgc
gaggacggcgagatcgagagcgtcagcgagagaggcgactgggagtgttacccacatgac
cccaccgtatggcatcatcctgtcacctggcagccatccaaggagggagaccatctactc
ggacgaatcaccctcagcaagaggagcgccgccatgccaaaagaagctggagctctgctg
gggttaaaggtggtgggaggcagaataacagagtcagggagattaggtgccttcatcact
aaagtcaagaagggaagcctggctgacgtggtgggacatctaagagcaggggatgaagtg
ctgcagtggaacgggaagctgttaccgggggcgaccatgaaggaagtttacaacatcatt
ctggagtctcaagccgagcctcaagtggagctgttggtatccaggccgattggggtgttt
agaaaatatcatgatatcccaagaatccccgacacgtcccaccctccattagaatctaca
ggttccagttcttttgagtcccagaagatggagagaccatccttacatgtcctgtctccc
tccagtcccgggatgcttcaagatcaagatgctcctcagttaatgccagggcaactctca
gtgaagctgtggtatgacaaagtcggtcatcagctcatggtcaacgtgcagctggccaca
gagcttcctcttcggcctgatggccggccaaggagcccctacgtcaaaatgtacttcctc
cctgaccgcagtgacaaaagcaaacggaggacgaaaacaatgaagaggacctgtgagccc
aagtggaaccagacgttcgtctaccctcacgtccatcgcagggatttccgcaaccacatg
ctggagctgacgatatgggatcaacccaggtcaccggacgaggacagcacctttatggga
gagatcctcatcgagctggagacggccttgctggacgacaaggcccactggtatccactc
caaacccacgacgtctcctccataccgctaccccgaccctccccgttcctgccccgacga
cacaccgacgcccccggcaaaaagctgcagcgttctcagcgtgtaacagagcctgaattt
gatgaaggtacagcagtaatgtctaaagcagcagacgggcggggcagggagaggcagcgg
gagtccacgtccaccctggaggtgccggaccagcagaggacacccgccctgcacattcgc
tcccgctcggtctcgccgcaccgcgaggatcaggggcggacgcggtcccggccgcccaac
gttcccgcccagaggagtctggatgacgagcttcctcacgcgcgccgctcccgctctccg
acccgccactacgacaccgccaggggtcgccatcaggaggagtaccttgatgacagtgag
gtcatcatgatccactagtcaatgcgaggcaaaagtgccgagtgcctccacaccaggaga
tctcctaggcccaataacacactgccccctaagatgccccttttgttccacggcacccac
acacacacaaacagtgatctgcagccttctctggacagggttaggagcgctagcgccaac
tgtctgactccagactatcacgccccctcatcagagactgaaagaacatctttgtcccat
tccctgccccggagacgtccggcaagccccaggattcttatccaacatgcgtcccctgaa
gatgacaggcagcctcggaccccggagacacccgagtgtcacgctgttggcaggaagctc
ccagacagcggcaggggccacctccaaggtggtgcgtctctttcctcctcagtgacgtcc
tcctccgcccgcagagtgaggcaactcccacagcttccccccaagagcagcactgtggaa
caagccctggtagcagaagagtgcgttcgtcagctccagatgagggtccattccaaccgg
gcatcagctgccgccacctccagccaacatgacctggaccgagccctcaagattaaacgg
gagctctacaaggaccagaggcggagcagcgagaacgcctcccataagtcctcggacagc
gatgtcagcgacgtgtcagccatctctcgaaccagcagtgcctctcgcatcagtagcacc
agctacatgtccatccagtcagagagaccccggggacgcttcagggccatgcgtgcaacg
ggccgccacatgatgaagagcaccagcgtgagcggcgagatctacggcacggagcacgcc
gacggcagccaatcggacacggcgctcggaagcctggggagcggcatcaagaagcggcgc
tcgagcctcagccagcgcgtcgtcgccatcttgccgtccaggcgcagccggagcacgtcg
caactcagccagacggaggcggcgggtaaggcgacgcaaagacagaaagaagctccggca
gggaagaaggtgggtaagggcggcagcagcatccagaggagcgtggagaccggcatggcg
gtggagtacccgcggggagggtccaccatgaaccggcaggccagcagagagtcgaccgat
ggcagcatgaacagctacagctctgaggggaatctgatcttctcaggtatgcggttgggc
gccgacagtcaattcagtgacttcctggacggtttgggccccggtcagctggttggccgg
caaactctggccacgcctgccatgggtgatgttcagatcggtttgatggataagaaaggt
cagctggaggtggaggtgataagggcacgaggcctgacctccaaaccaggctccaaatcc
ctcccagctccctacgtcaaggtgtacctgctggataatggaacttgtaaagccaaaaag
aaaaccaagattgcacgaaagaccctggagcccctctaccagcagcagctgctcttcgag
gagagtccccagggcagggtgcttcaggtgatagtttggggcgactacggacgattggac
cacaaatgcttcatgggcgtagcacagatcttattggaggagctggacctctcgagcacg
gtgattggctggtacaaactgtttccgccgtcctcattggtggaccctacgttagctcag
ctcacgcggctggcgtctcagacgtcactggacagctcaggaccgccaccgggcgttcgg
tcctag
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