KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130207487
Entry
130207487         CDS       T09868                                 
Symbol
xpo1b
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03008  Ribosome biogenesis in eukaryotes
pswi03013  Nucleocytoplasmic transport
pswi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130207487 (xpo1b)
   03008 Ribosome biogenesis in eukaryotes
    130207487 (xpo1b)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130207487 (xpo1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130207487 (xpo1b)
   03009 Ribosome biogenesis [BR:pswi03009]
    130207487 (xpo1b)
   03016 Transfer RNA biogenesis [BR:pswi03016]
    130207487 (xpo1b)
   03036 Chromosome and associated proteins [BR:pswi03036]
    130207487 (xpo1b)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     130207487 (xpo1b)
Ribosome biogenesis [BR:pswi03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    130207487 (xpo1b)
  Pre-60S particles
    130207487 (xpo1b)
Transfer RNA biogenesis [BR:pswi03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    130207487 (xpo1b)
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     130207487 (xpo1b)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd Hydrolase_3 BspA_v
Other DBs
NCBI-GeneID: 130207487
NCBI-ProteinID: XP_056292097
LinkDB
Position
17:6315132..6342221
AA seq 1071 aa
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMESSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGVEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE
FPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAATQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITT
VLNPSNSTNNQAFIQEYVANLLKTAFPHLQDAQVNVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcggaccatgcagcacagcagctgctggacttcaac
cagaaactggatatcaacctgctggataatgtggtgaactgtctatatcacggggtggga
ccacagcaaagaatggcacaagaagtgttgacacacttaaaagagcaccccgatgcctgg
acgagagtggacaccatcctcgagttttcccagaacatgaacaccaaatactatgcgctt
cagattctggaaactgttatcaaaacaagatggaagattctccccaggaatcagtgtgaa
ggtataaaaaaatacgttgtcggcctcattatcaagacttcatcagatgcatcaaatgtg
gagaaagaaaaggtgtacatcgggaagctgaacatgatccttgttcagatcctaaagcag
gagtggcccaagcactggcccaccttcatcagcgacatcgtcggggcaagtcgcaccagc
gagagcctttgtcagaacaacatgatcattctcaagctgctcagcgaggaggtcttcgat
ttctcgagtggccagatgacccaggtcaaggccaagcaccttaaggacagcatgtgcaat
gaattctcccagatattccagctctgccagtttgtcatggaaagctcccagaacgccccc
cttgtccacgccactctggagaccctcctacgttttctcaactggattcctctggggtac
atctttgaaaccaaactgatcagcacattggtgtataagttcttgaacgtgcccatgttt
cgcaatgtgacactgaagtgtctcaccgagatcgccggcgtgagcgtcagccagtacgag
gagcagttcgtcacgctcttcaccctgaccatgtgtcaactcaagcagatgttacccctg
aacaccaacatccgcctggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagtctgttcctctgcactttcctcaaagagcacgggcagctcatcgagaagcgg
cttaacctcagagaaacattaatggaggcgcttcactacatgctgctggtttccgaggtg
gaggagacagagatcttcaaaatttgtctggagtattggaaccacttggctgctgagctc
tacagagaaagtcccttctctacgtccacgtccccactgctctccggcaaccagcacttc
gatgttccaccacgcagacagctctacctgcccgtactctccaaggtgcgtctgctcatg
gtgagtcggatggccaagccagaggaggtgctagtggtggagaatgaccagggagaggtg
gtcagggagttcatgaaggacaccgattccataaacctctacaagaacatgagggaaacc
ctcgtatacctgactcacctggactacgcagacacggaacgaataatgacggaaaagctt
cacaaccaggttaacggcgtcgagtggtcctggaagaacctcaacacgttgtgctgggcc
atcggctccatcagcggggccatgcacgaggaggatgagaagaggttcctggtcactgtc
atcaaggatctgctgggtctgtgcgagcagaagagagggaaggacaacaaggccatcata
gcctccaacatcatgtacattgttggccagtatccacgctttctcagagcccactggaag
ttcctcaaaaccgtcgttaacaaactctttgagttcatgcacgaaacccacgacggtgtt
caggacatggcctgtgacacgttcatcaagattgcccagaagtgccgccgccacttcatc
caagtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgacctccaacctcagcaggttcacacgttctatgaggcggtaggttatatg
attggtgcccagacagaccagactgttcaagagcaccttatagaaaaatacatgctgctg
cccaaccaagtgtgggacagcatcatccaacaggctaccaaaaacgtggacatcttgaag
gatccggagacggtgaaacagctgggcagcatcctgaagaccaacgtcagagcctgcaag
gccgttggacacccctttgtcatccagctggggcggatttaccttgacatgttgaacgtc
tacaaatgcctcagcgagaacatctctgctgccattcagacaaatggtgagatggtgaca
aagcagcctctgatccggagtatgagaacggtgaaacgcgagacactaaaactgatctcg
ggctgggtcagccgatcaaacgacccacagatggtcggggagaactttgtcccgccgctg
ctggacgctgtcctcatcgactatcaacgcaacgtccctgctgcccgcgagccggaggtc
ctcagcaccatggcgaccatagtcaacaaactggggggacacatcaccagcgagataccc
cagatctttgatgccgtcttcgagtgcaccctaaacatgatcaacaagaactttgaggag
ttcccagagcacaggacacacttcttctacttattgcaagcagtgaactctcactgcttc
cccgcattcctcgccatcccccctgcccagttcaaactggtgctggactccatcatctgg
gccttcaaacacaccatgaggaatgtggctgatactggtctgcagattctgtacacgctg
ctgcagaatgtggcccaggaggaagcagccacgcagagtttctaccagacatacttttgc
gatatactacaacacatcttctctgtggtcaccgacacatcgcatactgctggcctgacg
atgcatgcgtccatcctggcttacatgttcaacctggtggaggaggggaagatcaccacg
gtgctgaatccctccaactccaccaacaaccaggccttcatccaggagtacgtggccaac
ctgctaaagaccgctttccctcacctccaagatgctcaggtgaacgtgtttgtgaccggg
ctgttcagcttaaaccaggatattcctgccttcaaggagcaccttcgggacttcctcgtc
cagataaaggagtttgccggcgaggacacctccgacctgtttctggaggagagggaggcg
tcgcttcgacaggcccaggaagagaaacacaagatccagatgtccgtcccgggcatcctc
aacccgcacgagatccccgaggagatgtgtgactga

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