Pseudoliparis swirei (Mariana hadal snailfish): 130207487
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Entry
130207487 CDS
T09868
Symbol
xpo1b
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03008
Ribosome biogenesis in eukaryotes
pswi03013
Nucleocytoplasmic transport
pswi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130207487 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
130207487 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130207487 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130207487 (xpo1b)
03009 Ribosome biogenesis [BR:
pswi03009
]
130207487 (xpo1b)
03016 Transfer RNA biogenesis [BR:
pswi03016
]
130207487 (xpo1b)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130207487 (xpo1b)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
130207487 (xpo1b)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
130207487 (xpo1b)
Pre-60S particles
130207487 (xpo1b)
Transfer RNA biogenesis [BR:
pswi03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
130207487 (xpo1b)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
130207487 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
130207487
NCBI-ProteinID:
XP_056292097
LinkDB
All DBs
Position
17:6315132..6342221
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMESSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGVEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE
FPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAATQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITT
VLNPSNSTNNQAFIQEYVANLLKTAFPHLQDAQVNVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcggaccatgcagcacagcagctgctggacttcaac
cagaaactggatatcaacctgctggataatgtggtgaactgtctatatcacggggtggga
ccacagcaaagaatggcacaagaagtgttgacacacttaaaagagcaccccgatgcctgg
acgagagtggacaccatcctcgagttttcccagaacatgaacaccaaatactatgcgctt
cagattctggaaactgttatcaaaacaagatggaagattctccccaggaatcagtgtgaa
ggtataaaaaaatacgttgtcggcctcattatcaagacttcatcagatgcatcaaatgtg
gagaaagaaaaggtgtacatcgggaagctgaacatgatccttgttcagatcctaaagcag
gagtggcccaagcactggcccaccttcatcagcgacatcgtcggggcaagtcgcaccagc
gagagcctttgtcagaacaacatgatcattctcaagctgctcagcgaggaggtcttcgat
ttctcgagtggccagatgacccaggtcaaggccaagcaccttaaggacagcatgtgcaat
gaattctcccagatattccagctctgccagtttgtcatggaaagctcccagaacgccccc
cttgtccacgccactctggagaccctcctacgttttctcaactggattcctctggggtac
atctttgaaaccaaactgatcagcacattggtgtataagttcttgaacgtgcccatgttt
cgcaatgtgacactgaagtgtctcaccgagatcgccggcgtgagcgtcagccagtacgag
gagcagttcgtcacgctcttcaccctgaccatgtgtcaactcaagcagatgttacccctg
aacaccaacatccgcctggcctacgccaacgggaaggacgacgagcagaacttcatccag
aacctcagtctgttcctctgcactttcctcaaagagcacgggcagctcatcgagaagcgg
cttaacctcagagaaacattaatggaggcgcttcactacatgctgctggtttccgaggtg
gaggagacagagatcttcaaaatttgtctggagtattggaaccacttggctgctgagctc
tacagagaaagtcccttctctacgtccacgtccccactgctctccggcaaccagcacttc
gatgttccaccacgcagacagctctacctgcccgtactctccaaggtgcgtctgctcatg
gtgagtcggatggccaagccagaggaggtgctagtggtggagaatgaccagggagaggtg
gtcagggagttcatgaaggacaccgattccataaacctctacaagaacatgagggaaacc
ctcgtatacctgactcacctggactacgcagacacggaacgaataatgacggaaaagctt
cacaaccaggttaacggcgtcgagtggtcctggaagaacctcaacacgttgtgctgggcc
atcggctccatcagcggggccatgcacgaggaggatgagaagaggttcctggtcactgtc
atcaaggatctgctgggtctgtgcgagcagaagagagggaaggacaacaaggccatcata
gcctccaacatcatgtacattgttggccagtatccacgctttctcagagcccactggaag
ttcctcaaaaccgtcgttaacaaactctttgagttcatgcacgaaacccacgacggtgtt
caggacatggcctgtgacacgttcatcaagattgcccagaagtgccgccgccacttcatc
caagtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgacctccaacctcagcaggttcacacgttctatgaggcggtaggttatatg
attggtgcccagacagaccagactgttcaagagcaccttatagaaaaatacatgctgctg
cccaaccaagtgtgggacagcatcatccaacaggctaccaaaaacgtggacatcttgaag
gatccggagacggtgaaacagctgggcagcatcctgaagaccaacgtcagagcctgcaag
gccgttggacacccctttgtcatccagctggggcggatttaccttgacatgttgaacgtc
tacaaatgcctcagcgagaacatctctgctgccattcagacaaatggtgagatggtgaca
aagcagcctctgatccggagtatgagaacggtgaaacgcgagacactaaaactgatctcg
ggctgggtcagccgatcaaacgacccacagatggtcggggagaactttgtcccgccgctg
ctggacgctgtcctcatcgactatcaacgcaacgtccctgctgcccgcgagccggaggtc
ctcagcaccatggcgaccatagtcaacaaactggggggacacatcaccagcgagataccc
cagatctttgatgccgtcttcgagtgcaccctaaacatgatcaacaagaactttgaggag
ttcccagagcacaggacacacttcttctacttattgcaagcagtgaactctcactgcttc
cccgcattcctcgccatcccccctgcccagttcaaactggtgctggactccatcatctgg
gccttcaaacacaccatgaggaatgtggctgatactggtctgcagattctgtacacgctg
ctgcagaatgtggcccaggaggaagcagccacgcagagtttctaccagacatacttttgc
gatatactacaacacatcttctctgtggtcaccgacacatcgcatactgctggcctgacg
atgcatgcgtccatcctggcttacatgttcaacctggtggaggaggggaagatcaccacg
gtgctgaatccctccaactccaccaacaaccaggccttcatccaggagtacgtggccaac
ctgctaaagaccgctttccctcacctccaagatgctcaggtgaacgtgtttgtgaccggg
ctgttcagcttaaaccaggatattcctgccttcaaggagcaccttcgggacttcctcgtc
cagataaaggagtttgccggcgaggacacctccgacctgtttctggaggagagggaggcg
tcgcttcgacaggcccaggaagagaaacacaagatccagatgtccgtcccgggcatcctc
aacccgcacgagatccccgaggagatgtgtgactga
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integrated database retrieval system