Pseudoliparis swirei (Mariana hadal snailfish): 130207488
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Entry
130207488 CDS
T09868
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130207488 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130207488 (papolg)
Enzymes [BR:
pswi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
130207488 (papolg)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
130207488 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
130207488
NCBI-ProteinID:
XP_056292099
LinkDB
All DBs
Position
17:complement(6381098..6399393)
Genome browser
AA seq
838 aa
AA seq
DB search
MKEMSSTMPGGQQPQKHYGITSAISLAPPREIDNQYTKKLCDAMKPFGVFEDEEELNHRL
AVLGKLNNFVKEWISEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERSDFFQSFFEKFKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNL
DLRGDSILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLG
FLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDP
RVNPSDRYHLMPIITPAYPQQNSTYNVSSSTRTIMSEEFKYGLSVTDEILQGKAEWSKLF
EPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFP
GSKENRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMK
IEATHVKKKQLHQYLPPELVQKKKRSIAELNRSSNGGSSKRISLDNSHLDSSRDTDSGTP
FNSPPSKPSKPTSDTEDSVSPPKQLFIEGSPSSAATTTTSAAAATAAADQGISITVIGSD
SAVKAKPDSPPPASSSAIADVQPNAASSPREEPNGLEDPVNGAPAKRPLSPPQEDLAKRH
KEAEVSNDDSAFKEPYPPSSESCTHGEGPNITPLSGSKAKPIPTIDTSRTQRLPSMELPD
ASSPLPASTSCRVVKNSIKLALNRPNITPPKPPVFESTLVTDAPPPASEEKGMSIPVIGS
KHVTPKQVVPPVGSSIPTLVSRGADPLNGATAKRSHSPSLEEQAKRLKETEKARIHIV
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtccagcaccatgcctggcgggcagcagcctcagaaacactacggcatc
acctctgccattagcctggcacccccacgagaaatagacaaccagtacaccaagaagctc
tgtgacgctatgaagccttttggggtgtttgaagacgaagaggaattgaaccatagactt
gcagttctcgggaagttgaataactttgtgaaagaatggatctcagagattagtgaattg
aagaacctcccaccatcagctataagctgcgtcgggggcaagatatttacatttggttcg
tacagacttggagtgcacacaaaaggagctgatattgatgccctatgtgtggccccacgc
catgtagagagaagtgactttttccagtctttctttgagaaattcaaacagcacgaagaa
atcaaagacctgagggctgtggaggatgcctttgtcccagtgatcaaattcaaatttgat
ggaatagagattgacctgctttttgccagactggccttacagtccattccagacaacttg
gacctgaggggagactccatcctgagaaacctggacattcggtgtatccgcagtcttaac
ggttgtcgtgtgactgacgaaattctgtacctggtgccaaacaaagagaatttcagactg
acattgagagccatcaaactgtgggcaaaacgccgtgggatctactccaacatgctgggc
tttcttggtggagtgtcttgggccatgctggtggccaggacctgccagctctaccctaac
gctgtggctgccacgctggtccacaagttcttcctggtgttttccaaatgggagtggccg
aatcctgtgctgttgaaacagcccgaggacagtaatctgaatttacctgtgtgggatccc
agagtcaacccatccgacagataccacctgatgcccataatcacccccgcctacccccag
cagaactctacgtacaacgtctcctcgtcaacgcgcaccatcatgagcgaagagttcaaa
tacggcctcagcgtcacagatgagattcttcagggaaaggcagagtggtccaaactcttt
gagccgcccaactttttccaaaagtacaagcattacattgttctgaccgcaagcgcttcc
acagaagaaaaccacttggaatggatcggcctggtggagtcaaaaatccgtgttctggtg
ggaaacctggagaggaatgagtacatcaccttggctcatgtcaacccccagtccttcccc
ggatccaaagagaaccgcaacgagaacgactttgtgtccatgtggttcattgggatcatc
ttcaagaaagtggagaacgcggagagtgtgaacattgacctgacctatgacatccagtcc
ttcacagacactgtgtacagacaagccaacaacatcaacatgctgaaggacgggatgaag
atcgaggcgacgcacgtgaagaagaaacagctccatcagtaccttcctcctgaactagtg
cagaagaagaagaggagcatagcggagttgaaccgtagctccaacggggggagctccaag
cggatctctctggacaacagtcacctggacagctccagagacacagattcagggactccc
tttaactccccacccagcaaaccctcgaagcccacgtccgacacagaggacagcgtcagt
cctccaaagcaacttttcatagaaggctccccatcatcagcagcaacaacaacaacatct
gctgctgctgctacagctgctgcagaccaaggcatatccatcacggttattggatctgac
tctgcggtcaaagcgaaacccgactcccccccgccggccagcagcagcgccatcgcagac
gtgcagcccaacgctgcaagcagccccagagaggagcccaacggcctggaggacccggtc
aacggcgctcctgccaagagaccgctctcgcccccgcaagaggacctggccaagaggcac
aaagaggccgaggtgtcaaatgatgactctgcatttaaagagccatatccaccgtcttct
gagtcctgcacacatggagaaggacccaatattacccccctttctggttcgaaggctaag
ccaattccaaccatcgatacctcaagaacacagagacttcccagcatggagctgccagac
gcctcatcgcctctcccagccagtacaagctgccgcgtcgtgaaaaattccattaaactg
gccctcaaccgccccaacatcacacctcccaagcccccagtgtttgagagcacccttgtc
accgacgctcctcctcctgccagtgaagaaaagggcatgtccattcccgtcattggctca
aagcacgtgacgcccaagcaagtggtgccccctgtcggcagctccatccccacgttggtg
agccgaggagccgacccgctgaacggagcgaccgccaagagatcccactccccctctctg
gaggagcaagccaagaggctgaaagaaacagaaaaggccagaattcacatagtttga
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