Pseudoliparis swirei (Mariana hadal snailfish): 130207584
Help
Entry
130207584 CDS
T09868
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130207584
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130207584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
LRR_4
I-set
Ig_2
LRR_1
ig
fn3
LRR_EndoS
V-set
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
130207584
NCBI-ProteinID:
XP_056292206
LinkDB
All DBs
Position
17:14160590..14168158
Genome browser
AA seq
600 aa
AA seq
DB search
MLQLRLLPHTIFLARTDTRIHAQQHPAVSSPPMRSLIAWFNIQAIETYSQCLRGCNCVED
RHGRSLVCMEEGAFGAISENLPDDMTKIRIEKSHFTEVPRGAFSQTPALENLWLNFNDIT
VINSKGLQGLGNLTELRLQGNKLRSVPWTAFEDTPALKILDLKHNQLDVLPEHALKFLPD
LTYLDLSFNRLTVISKEVFQNWPLYQKLQNTEERDGTAFQTNVVLALHDNVWVCDCRLKG
FVEFIRSLSPPIILMNSYLICSGPDFKAGKFFHEVELQTCVKPVVTTPSSNINLPQGVNL
TLRCSAKARPDPSLWWTYGLKIIRGFHEPQERVDEDTIRSLLVIPSLHAADRGVYTCTAV
NFIGNSSVSILLDVHSPDGSQSLVLSENPPRPAASDENVYIDIHIAKQTVRGITIEWYAT
LDHPAETWFTIHFGLTGNNKKEMIFIGPGIHSYSVSDLMPATKYEICVSLKNQAPRNDQC
IVFVTGSDITEMEQREKLIHIVVIVLAMVLAVPIGMYACTTDTKFACLEGIMESWKNRRR
ERSLSGMAHERQGTFDSLQAASDEGLVNKDSTEDRKVRRRSEDRQPKGKADHSRLTAELY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctccggctcctgccgcacaccatcttcctcgcacgcaccgacacccgcatc
cacgcccaacaacatcctgccgtcagttcccctcccatgcgctcccttattgcttggttt
aacatccaggcgattgaaacatattctcaatgtttacgtgggtgcaactgcgtggaagac
cgccatggaaggtcgctcgtatgtatggaggagggtgcgtttggggccatatcagagaac
cttccagatgatatgaccaaaatacggatagaaaaatctcacttcactgaagtacccaga
ggggcattttcacagacgcccgccttagaaaacctgtggctaaacttcaacgatatcaca
gtgatcaactcaaagggtctgcagggtttgggaaacctcactgagctccgcctgcaaggg
aacaagcttcgttcagtaccatggaccgcgttcgaagatacgccggccctgaagatcctg
gacctgaagcacaaccagctggatgtgctgccggagcatgctttaaagtttttgccagat
ctgacttacttagacttatccttcaatcggcttacggtcatatcaaaggaggttttccaa
aattggcctctctaccaaaaactgcagaacacggaggagcgggacggcaccgctttccag
acgaacgtcgtcctcgcgctccacgacaacgtgtgggtctgcgactgccgcctgaagggc
ttcgtggagttcatcaggtccctgagcccccctattatactgatgaactcctacttgatc
tgctcagggccggactttaaggctggcaaattcttccatgaagtagagctgcagacgtgc
gtgaagcccgtcgtcaccaccccgtcctccaacatcaatctgcctcagggcgtaaacctc
accctgcgctgctccgccaaggcccggccagacccctcgttgtggtggacatatggtctg
aagataatcagaggatttcatgagcctcaggaaagagtggatgaagacaccatcagatcc
ctcctggtgatcccctctctgcatgctgctgaccgtggcgtctacacctgcactgctgtc
aacttcattgggaactcgtctgtcagcatcctcctggacgtccactctcctgacggctcc
cagtcattagtcctctctgaaaacccgcctcgaccggctgccagtgatgaaaacgtctac
atagacatccacattgccaaacagactgtccgcggtattaccattgagtggtacgccact
ttggaccaccctgcagaaacctggttcaccatccactttggcctcacaggcaataataag
aaagaaatgatcttcatcggccctgggattcactcttattccgtctctgatctgatgcct
gctaccaaatatgaaatctgtgtaagccttaagaaccaggcaccacgcaatgaccagtgc
attgtgtttgtaacaggaagtgacattacagagatggaacagagggagaagctgatacat
atagtggttatagttttagccatggtgctggcggtccctataggtatgtatgcctgcacc
accgacactaagttcgcctgcctggagggtatcatggagtcctggaagaaccggcggaga
gagagaagcttatccgggatggcgcatgagaggcagggcacctttgacagcctgcaggcg
gccagcgatgagggcctggtaaataaagactccactgaagacaggaaggtgaggagaagg
tcagaggacagacagcctaaaggcaaagccgaccacagcagactcacagctgaactgtat
taa
DBGET
integrated database retrieval system
