Pseudoliparis swirei (Mariana hadal snailfish): 130207590
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Entry
130207590 CDS
T09868
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130207590 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130207590 (usp9)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130207590 (usp9)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130207590 (usp9)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130207590 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
130207590
NCBI-ProteinID:
XP_056292215
LinkDB
All DBs
Position
2:complement(21458401..21505889)
Genome browser
AA seq
2642 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLSQNQISSPNSSNENSPVSPPDEQSHGDGPP
QLEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQRF
FRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMATN
PHCKFHIYNGTRPSETIPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLHD
RFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEAK
NEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVN
KVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNLV
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPGS
RYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMG
DEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDL
ELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKAS
YDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHI
TLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGELVDPADD
RKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCL
PGVIMSLHLRYISFLWQVADLGCSLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHAK
LGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPLV
LSMLTRNNFLPSADMETRRGAYLNALKIGKLLLTAVGFGHVKAVAEACQPNAEGNIPVSP
INQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDEVTENNFFQASKYIPDICV
IRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFAL
MPTALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLF
TVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKSTG
ETGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQFM
KSGEFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWE
YLPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDE
KQENESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASKLQYYVP
RGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKIC
QGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRL
LIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPEN
QVIQQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYVIQRNGGDGEKNRWYKFDDGD
VTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSE
LVKYISELTISATKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVY
LNPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKN
VRYWFAHKVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTTSPGSS
TQSSDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPA
TFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINVPPDPHSPSPGNP
PLPNPYGDTNLTAPVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQF
SSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTI
QRSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTG
NPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQE
APDDQDSSPPEDTSLYPPGTMQLQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPAL
TAPSPGPGPGPGPTPGPGPRAQDNWESTEEVAPAPAEAPTPAPAEAPAPAPTTTPAPAPP
KE
NT seq
7929 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctcacctgtggggggcaacgacagtcagggccagggccag
gcacctgacgcgcaaagccaacccccattgtcacagaaccagatatcatctccaaactca
tctaatgagaactctccagtgagcccaccggatgagcagagccacggggatggcccccct
cagctggaagaggagcccgccttccctcacaccgacctcgccaagctggatgatatgatc
aacaggcctcgttgggtcgttccagttttgccaaaaggagagttggaagtcctcttggaa
gctgctattgacctgagtaaaaaaggactggatgtgaagtgtgaggcttgtcagagattt
ttccgagatggtctgaccatctccttcacaaagatcctaacggacgaggcagtcagcggc
tggaagtttgagattcacaggtgtatcatcaataacacgcaccggttggtggagctgtgt
gtggccaagctctctcaggactggttccctctactggagcttctggccatggccaccaac
ccccactgcaagttccacatctacaacggcacgcggccctctgagaccatccccgccgga
gcgcagctggccgatgacgaactcttcgcccgaccgccggacccgcgctctcctaagggc
tggctggtggacttaataaacaaatttggcacgttaaatgggtttcaaatgttgcacgat
cgctttatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaagcccttt
ggccagtgttacgagttcctcacattgcacacggtaaagaagtacttccttccagtcatc
gagatggttccccagtttctagagaacctcactgacgaggagctgaagaaagaggccaag
aatgaagccaaaaacgacgcactgtccatgataatcaagtctctgaagaatctggcttct
cgcgtaccggggcaggaggagaccgtgaagaatttagagatttttagattaaaaatgatt
cttaggttattgcaaatttcttcttttaacggcaaaatgaatgcactaaatgaagtgaac
aaggtgatctccagtgtgtcctactacactcatcggcacaaccccgaagaagaggagtgg
ctgactgcggagcgcatggcggagtggatccagcagaaccacatcctgtccattgtgctg
agggacagtttgcaccagccgcagtacgtagagaaactggaaaagatcctccgctttgtt
atcaaagaaaaagctcttacaatgcaggacctggacaacatctgggcggcacaggctggt
aagcacgaggccatcgtgaagaacgtccacgacctcctggccaagctggcgtgggacttc
tcgcccgagcagctcgaccatctattcgactgtttcaaggcgagctggaccaacgccagc
aagaagcagcgggaaaaactgctggaactcatccggcgcttggccgaggacgataaggac
ggggtgatggcccacaaggtcctcaacctgctgtggaacctggcgcacagcgacgacgtg
cccgtggacatcatggaccaggcgctcagtgctcacatcaaaatattagattacagttgc
tcacaggacagagacacacagaagattcagtggatagaccgcttcatagaggagctacga
accaatgacaaatgggtgattcctgccctgaagcaaatcagagaaatctgtagcctcttt
ggagaagcccctcaaaaccttagaaagaaaatgccaattaacatacaaacgaacttagtg
ggtcaaactcagaggagtcctcatgtgttttaccgccacgacctgatcaaccagctgcag
cacaaccacgctctggtcaccctggtggccgagaacctctcggcctacatggagaccatg
aggcagttctccaaagaagaacaggctgagtttgaccctcagacggtcagaccaggaagc
cgctacagtcacgtgcaggaagtacaggagcgactcaacttcttgaggttcctgctcaaa
gacggtcagctgtggctctgcgcccctcaggccaaacagatctggaagtgtctggctgag
aacgcggtgtttctctgcgaccgcgaggcctgcttcaaatggtactctaagctgatgggc
gatgaaccagacctggacccagacatcaacaaggacttctttgagaacaacgttctgcag
ttggacccgtccctgttgacggagaatggcatgaaatgcttcgagaggttcttcaaggcc
gtgaactgcagggagggcaagctggtggcgaagcgcagggcttacatgatggatgacctg
gagctcatcggcttggactacctctggagggtggtaattcaaggaagcgacgatatcgcc
agccgagccatcgacctgctgaaagagatctacaccaacctcggaccaaaactacaagtc
aatcaggttgaaattcacgaggatttcatccagtcctgtttcgaccgcctgaaggcatcc
tacgacacgctgtgtgtgttggatggggacaaagacagcatcaactgcgcccgtcaggag
gcgatccgcatggtgcgagttctcaccgtactcaaagagtacatcaacgagtgcgacagc
gattaccacgaggagaggactatactgccgatgtcgagagccttccgggggaagcacatc
acattgattgtccgcttccccaaccaggggcgccaggtggatgacctggacatctggtca
cacaccaatgacacgatcggctcggtgcggcgaggcatcctcaaccggatcaaagccaac
gccgcgcacaccaagattgagctcttcatcggtggagagctcgttgacccggctgacgac
aggaagctgatcgggcagctcaatttgaaggacaaaacgctgatcacggccaagctgacc
caggtgagcgccaacatgccttcgagcccagacagctcgtccgactcgtccactggctcc
cccggtaaccacggcaaccactacagcgatggccccaaccctgaagtggagagctgtctg
cccggtgtgatcatgtcgctgcatctgcgctacatctccttcctgtggcaggtggccgat
ctgggctgcagcctcaacatgccgctgctcagagacggagctcgagttctcatgaaactc
atgcccccagacaacaccaccgtggagaatctgcgagccgtgtgtctggaccacgccaag
ctcggggagaacagcctcagtccctcgctggactcgcgcttcttcggcccctcgccctca
caagtgctctacctcatcgaggttgtttatgctttgctgatgccagccagtgccacgctg
ggcgaagacgccagcgacttccagtacaacttcctgaagagcggcgggctgcccctggtg
ctgagcatgctcaccaggaacaacttcctcccgtcggcggacatggagacgcgccgcggc
gcttacctcaatgcccttaagatcggcaagctcctcctcaccgccgtgggcttcggccac
gtgaaggccgtggccgaggcctgccagcccaacgccgagggaaatattccggtctcaccg
atcaatcaggcgactcatgaccaggccctggtcctccagagcgccctgcaaaacatcccc
aacccggcctcagaatgcatgctacgcaacgtcgccatccgcctcgcccagcagatctcc
gatgaggtcacagaaaataatttcttccaggcatcgaagtacatcccagacatctgtgtg
atccgagcggtgcagaaaatagtgtgggcgtcaggctgcggcacggtgcagctcgtcttc
agttcaaatgaagaaatcagcaagatctacgagaagacaaatgccgctaaggagccagat
ggggaagatgagcaggtgtgttgcgaggccctggaggtgatgacgctgtgtttcgccctc
atgcccacggctctggacacgctcagcaaggagaaggcgtggcagaccttcattattgac
ctgctgctccactgccacagcaaatctgtgcgtcaaatggcccaggagcagtttttcctg
atggcaacgaggtgctgtatgggccatcgacccctcctcttctttatcaccctcctcttc
accgtgctggggagtacggccaaggagagggccaaacacgcgggagactacttcacctta
ctcagacaccttctgaactacgcgtataacagcaacatcaacctgcccaacgccgaggtg
ctgctcaacaacgagatcgactggctgaaacggatcagggatgaggttaagagtacgggg
gagaccggcgtggaggagaccatcctggagggccaccttggggttaccaaagagcttctg
gccttccagacaccagagaagaagtattacatcggctgcgagaaaggaggagcgaacctc
atcaaggagctgatcgacgacttcatcttcccggcgtctaacgtgtacctgcagttcatg
aagagcggggagttccccacggagcaggccatccccgtgtgcagcacccccgcttccatc
aacgccggctttgagctgctggtagcgctggcggtcggatgcgtccgcaacctcaagcaa
atagtcgacaccctgaccgacatgtactacttgggttgcgagacgctgacggaatgggag
tacctgcctccggtggggccgcggcccaacaaaggcttcgtggggctgaagaacgccgga
gccacctgttacatgaactccgtcattcagcagctgtacatgatccctcccatccgcaac
ggcatcctggccatcgagggcacgggcaccgacgtggacgacgacatgtcgggggatgag
aagcaagagaacgagagtaacgttgatcctcgcgacgaggtgttcagctaccaccatcag
tttgacgataaaccctccagcaagtcggaggacaggaaggagtacaacatcggggtactt
cgccacctgcaggtcatttttggccacctggctgcgtccaaacttcagtactatgtcccc
aggggattctggaagcagttcaggttatggggcgagccggtgaacctgcgggagcagcac
gacgccctggagttcttcaactccctggtggacagtctggacgaggctctgaaagccctg
ggccaccccgccatgctgagcaaggtgctaggagggtccttcgccgaccagaagatctgt
cagggctgcccccacaggtacgagtgcgaggagtcgttcacgactctcaatgtggacatc
aggaaccaccagaacctgttggactccatggagcagtacgtcaagggagatcttctggag
ggcgccaacgcctaccactgtgagaagtgtaataagaaggtggacacggtgaagcgcctg
ctgatcaagaagctgccgcctgtcctggccatccagctgaagcgcttcgactacgactgg
gagagggagtgcgccatcaagttcaacgactactttgagttccccagggagctggacatg
gagccgtacacggtggcgggcgtggcgaagctcgagggcgacgacgtcaacccggagaac
caggtgatccagcagaacgagccctccgagcccacgccccccggcagctccaagtaccgc
ctggtcggagtgctggtccactcgggccaggccagcggcggacactactactcctacgtc
atccagaggaacgggggcgacggcgagaagaaccgctggtacaagttcgacgacggcgac
gtgacggagtgcaagatggacgatgaggaggagatgaagaaccagtgcttcggcggggaa
tacatgggcgaggtgtttgaccatatgatgaagaggatgtcgtaccggaggcagaagcgc
tggtggaacgcctacatcctgttctacgagcgcatggactcgctagacaaggacagcgag
ctcgtcaagtacatctccgagttgaccatctccgccaccaagccgcatcaggtcaagatg
cccggggtcatcgagtgcagcgtccgcaagcagaacgtccagttcatgcacaaccgaatg
caatacagcctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctat
ttaaaccctcctccaggacaagaccatcttctgccagaggcagaggagattgcgatgata
agtgctcagctggctgccagattcctcttcagcacaggttttcacaccaagaaagtcgta
cgggggcccgccagcgactggtatgacgccctctgcatcctgctgagacacagtaagaat
gtacgctattggtttgcacacaaggtcctgtttgcttaccccaaccggttctcggagtac
ctgctcgagtgcccgagcgccgaggtccgcggcgcattcgccaagctcatcgtcttcatc
gctcacttctcgctgcaggacggcccgtgcccctcccccaccacctcgcccgggtcctcc
actcagagctccgataacctcagtctcagtgaccacctgttgagagccgtcctcaacttg
ctcaggagagaggtgtctgaacacggccgccacctgcagcagtacttcaacctcttcgtc
atgtatgccaatctgggcctggcagaaaagacgcagctgttgaagctcaacgtccccgct
accttcatgctggtcgctctggacgagggccccggccctcctatcaagtaccagtacgcc
gagctgggcaagctctacaccgtggtctcccagctggtccgttgctgcgacgtctcctcg
cgcatgcagtcctccattaatgttcccccggacccccattcaccctctccaggtaacccc
cccctccccaacccgtacggtgacaccaacctgacggcgccggtgatgccggtgcagcag
ctggtggcggagatcttgttcgtgaggaccagctacgtgaagaagatcatcgaggactgc
agcaactcggaggagacggtgaagctgctccgcttcagctgctgggagaacccccagttt
tcctccaccgtgctcagtgagctgctctggcaggtggcgtactcctacacctatgagctg
aggccttacctggacttgctgctacagatcctgctcatcgaggactcctggcagacgcac
aggatccacaatgtgctgaagggcattcccgacgacagagacgggctctttgacaccatc
cagcgctccaagaaccactaccagaaacgggcctaccagtgcatcaagtgcatggtggcc
ctctttagcaactgctctgtggcctaccagatcctacagagcaatggcgacctgaagcgt
aagtggacgtgggcggtggagtggctgggggacgagctggagaggcggccgtacacgggg
aacccccagtacacctacaacaactggtcccccccggtgcagagcaacgagacctccaac
gggtacttcctggagcgctcgcacagcgcccggatgacgctcgccaaggcctgtgaactg
tgtcccgaggagctcaagtgtactcagggaagcccagggaaggagccggacgaacaggaa
gcgccggacgaccaggactcgtccccccccgaggacacctccctgtacccgccgggaacc
atgcagcttcagcagaacaaccacccccacgggcagccgtacaccgggcccgctgcgcag
cacatgaacaaccctcagcgtccgggtcctgcctcggccccgactccggggcccgctctg
accgccccgtcccctggccctggccctggtcctggtcccactcccggcccaggcccgcga
gcacaagataactgggagagcaccgaggaggtggccccggcccccgccgaggccccgacc
ccggcccccgccgaggccccggcccccgcacccaccacgaccccggcgcccgccccacct
aaggagtaa
DBGET
integrated database retrieval system
