Pseudoliparis swirei (Mariana hadal snailfish): 130207600
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Entry
130207600 CDS
T09868
Name
(RefSeq) DNA helicase MCM8-like
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pswi03032
]
130207600
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130207600
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130207600
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
130207600
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130207600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_lid
MCM_OB
Mg_chelatase
AAA_5
AAA_3
AAA
AAA_16
Sigma54_activat
AAA_22
FtsK_SpoIIIE
NTPase_1
AAA_30
T4_RIIA1
AAA_7
Motif
Other DBs
NCBI-GeneID:
130207600
NCBI-ProteinID:
XP_056292223
LinkDB
All DBs
Position
17:23423528..23437264
Genome browser
AA seq
819 aa
AA seq
DB search
MSGEESRRGSWRGGGGGSSSSGGGGGGARGGGSGNEPLSSQRVLCQATLDRLCPYKGWAL
YFTEGFIESSPIVEKIKVFEKYFTSKIELYDKDEIERQGSVLVDYADLTVNAAVRAALPD
LPTELKEQPETVLNCLGLAVHQVLTVDLEQQAAELQGEELPVAPPIVNIPHVSARLYNYE
PLSALRTLRASVFGRLVAVRGTVVRVSNIRPLCTRMAFRCLGGGAHLQSLPLQHGKYATP
TKCIQPDCRSRSFAPIRNSPLTHTVDFQIIKVQELIGGEQRETGRIPRTVECHLTSDLCD
SCVPGDTVTVTGIVRVTSDGTSRGNKDQCVFLLYIDATSVSNTKGQRSKLAQGSGGSLED
RCGGEEFTLKELYAVQEIQSQPDLLRLIVHSLCPVIYGQLLVKAALALVLFGGRQKHTDK
NSVPVRGDPHILMVGDPGVGKSQMLQAVCNLAPRGIYVCGNSTSTAGLTVSLSRDAGTGD
FALEAGALVLSDQGLCCIDEFDKLGNQQQALMEAMEQQSVSLAKAGIVASLPARTSVVAA
ANPVGGHYNRSKTVSENLKMGSAILSRFDVVFLLLDIPDESHDRHLSEYIMANRAGKGRT
SGSVVTRAGSDLDTSILLDHSDMPLSERLQVQSGETVDVIPVCLLRKYISYARRYVHPRL
SPEAAQTLKTFYLSLRAQAHSADSTPITTRQLESLIRLTEARARLELRETATKEDAEDVV
EIMKHSLADTYSDGLGNLDFQRSQLGSGMSQRGAAKKLINALHTYAQRTNQTQFDLQTLR
SVAAQMNIKVMDFEGLVSSLNEQGFLLKKGAKLYQLQTV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagaggaatccagaagaggctcatggaggggaggaggaggaggcagtagtagt
agtggaggaggaggaggaggtgctcgtggaggaggatcaggaaacgagcccttaagcagc
cagagagtcctttgtcaggcgactctggacagactgtgtccctacaagggctgggcgctc
tacttcactgaaggcttcatcgagagctctcccattgtggagaagatcaaagtgtttgag
aaatatttcacctccaagattgagctgtatgacaaggatgagatcgagcggcagggcagt
gttctggtggattacgccgacttgactgtaaacgccgcggtgcgcgccgctctaccggac
ctgcccacggagctgaaggaacagccggagaccgtcctcaactgtctgggattggccgtc
caccaggtgttgaccgttgatttggagcagcaggccgccgagctgcagggggaggagctt
cccgtcgctccgccgatcgtcaacatccctcacgtcagcgcgaggctctacaactacgag
ccgctgagcgctctgcggacgctgcgcgccagcgtgttcggccggctggtggccgtgagg
gggacggtggtccgcgtgagcaacatccgcccgctgtgcacccgcatggccttcaggtgc
ctggggggcggcgcgcacctgcagtcgctgcccctgcagcacgggaagtacgccacacct
accaagtgcatccagcccgattgccgcagtcgttccttcgccccgatccggaactctcct
ctgactcacaccgtcgacttccagatcatcaaggtgcaggagctgatcggcggggagcag
agggagaccggacgcatcccgcgcaccgtggagtgtcacctgacctccgacctctgcgac
agctgcgtccccggagacacggtcacggtgaccggcatcgtcagggtcaccagcgacggg
acttcccgggggaacaaggaccagtgcgtgttcctcctctacatcgacgccacttcagtc
agcaacactaaaggtcaaaggtccaagttggctcaggggtcaggggggtcgcttgaagac
cgctgtgggggggaggagttcaccctgaaggagctgtacgccgtccaggagatccagtcc
cagccggacctgctgaggctcatcgtgcactctttgtgtcccgtcatctacggacagctg
ctggtgaaggccgctctggccctggtgttgtttggaggtcgacagaaacacacggacaag
aacagcgtcccggttcggggggacccccacatcctgatggtgggggaccccggcgtgggg
aagagccagatgctgcaggcggtgtgtaacttggctcccagaggaatctatgtgtgcggc
aacagcacgagcaccgcaggtctgaccgtgagtttatcccgagacgcaggaaccggggat
tttgctctggaggccggagccttggtgctgtctgaccaaggcctgtgctgcatcgacgag
ttcgacaagctgggcaaccagcagcaggcgctgatggaggccatggagcagcagtcggtg
agcctggcgaaggccggcatcgtggcctcgctgcccgccaggacgtccgtggtcgccgcc
gccaaccccgtcggaggacattacaaccggagcaagacggtgtctgaaaatctgaaaatg
ggctcggcgattctctcccgattcgacgtcgtcttcctcctcctggacatcccggacgag
tctcacgaccgccacctgtcggagtacatcatggccaaccgggcggggaaaggccggacc
agcggctccgtcgtcacgcgggccggcagcgacctggacacctccatcctgctggaccac
tcggacatgccgctgtctgagcggctgcaggtccaatcaggcgagaccgtcgacgtcatc
ccggtgtgtctgctgaggaagtacatcagctacgcccgtcggtacgtccacccccggctc
tcccccgaggcggcccagacgctgaagaccttctacctgtcgctgagagctcaggcgcac
agcgccgactccacgcccatcaccacgcggcagctggagtctctgatccgactcaccgag
gcgagagccaggctggagctgcgggagacggccaccaaagaagacgctgaggatgtggtg
gagatcatgaaacacagtctggcggatacatattcagatggtttgggcaatctggacttc
cagcgctctcagctgggatcgggcatgagtcagcggggcgccgccaagaagctgatcaac
gcgctgcacacgtacgcccagaggaccaatcagacgcagtttgacctccagacgcttcga
tccgtggccgcccagatgaacatcaaggtgatggatttcgaaggtctcgtgagctccctg
aacgaacagggcttcctgctgaagaaaggagccaagctgtaccagctgcagaccgtctga
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integrated database retrieval system
