Pseudoliparis swirei (Mariana hadal snailfish): 130207602
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Entry
130207602 CDS
T09868
Symbol
ncapd3
Name
(RefSeq) condensin-2 complex subunit D3
KO
K11491
condensin-2 complex subunit D3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130207602 (ncapd3)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
130207602 (ncapd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
HEAT
PDS5
Cnd3
Adaptin_N
Cohesin_HEAT
Crb2-like_BRCT-like
IL13
Motif
Other DBs
NCBI-GeneID:
130207602
NCBI-ProteinID:
XP_056292224
LinkDB
All DBs
Position
17:complement(5337739..5368133)
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AA seq
1403 aa
AA seq
DB search
MSLISALQFLRLNEISKAWVDEVWDLEFTERKSLDDIIEDELSVSGDKEFRTLYQCLLTH
AANQQDEAVQSIWAILGENEVPIKSLVAVLSFFVLAGKDKTANVQQRVSGLHAASLYLLL
LGIPGSIATKVFHEVLLDTCSDLTSHCWPEDSGKKRKKDGTKSSQTDGKRSKPQRRETSE
MEVDGAEEEEEEEELHFTAKDLMKIRDAVVLLVQSLLRLLQTFPLKNRPQSAGNCTQIFS
KLLYFEPVIGEMTFAALDITKLRSVPEMAFHGLQLLCSPKHGEQKESLRRVFHQLLYVIL
MMKKKDNRGKPSLLVPSQAIQATRIQTLRFVCHLVDELKEMALPVLQILLQHICFQMVEK
SEFRSHGAQAVGMLTSQMETADYVCFIKWLFNFSRSSKMVGRLFSVDVVMVLLEQPERSL
RECQDPEFSFFLSHKFLIQKLLFDRRMDDSPTVQGHALASLAQCLELPSLNATRAVYNLF
SATGAQTVLESEITEGSLSSQQTQKTFRTLPFRTVEISTSDSSDCNAKENLALLLRRVKD
SKINVRKSALQTLVGLLKHNVIPLSWENLATLSERCRDPAVSVKKKALQCVGELLATKPE
CTVVQKAWLQGVVPAVVDPENSVQDKALEALDQVLLSQVKQYSASHQLDGSQRLTWDLLG
LLCNECWNLSRYFSRAFTIWSKQNKFTQTLITNLMSHTEAEHAAGAWLLLSKVVPSSLRL
PYGKILNAWESMFSSKDITATTCCHILCVMGDIAGHLNEDTKDRIVADLMSWLKTFTLSL
EVICAAVETLYQFGCSEDIKETQAFLNQHCGELVSVSEAYLAGIILREKGAQNLNEELMV
KHLHTLGVVSLHCPAKVGKRTVLLVESVLTTHSDQLAECQEELPVSLPLSQFKANSLPTR
VRAHGVITLGKLCLQHEELVQKYLPVFARELELGTEVAVRNNVVVIMCDLCVRYTNIVDH
YIPNISACLRDSEAIIREQTLIMLTNLLQEEFVKWKGALFFRFMVTLVDPVPAIASLCEY
CLLHLLLKKNPEMFSQHFIECIFHFNSYNKHKSYNKFPESEREKVRFSLKGDQHREKRFR
IYRFLLEHFTDAQRFNITVKINQTILACFADEEMQLDADGAEILSETFKILSLKEMKLQA
ISTPAGGAAGEEAEEENMATMAKAVLLVAQKKVVSQVQKKAFIENTVPLIIGLKSLLEQK
RSPVLRDLMAYLQVTMQDYRNEVKEFFSGDEQLAAELEFALKTAEKERKIAEQMDNCSLT
GETRTPTAQCSTQGSPVRSRPLPLVFATPQPPRPNPLSTRLAYTDRRVNSSRWEEHVQTK
SMGLEGTVMQKGVVDDRAISTPKGVGINLTFDEGVSAIFSDRRPSVVGETSVLHMRSDEQ
QAPGLRQWDVQSPLRQRKKSFKV
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaatatccgcgctgcagtttctgaggttgaatgaaatttcgaaagcctgggtg
gatgaggtgtgggacttggagttcacagagagaaaatcattggatgacatcatagaggac
gaactctcagtcagtggagacaaggaattccgaactttgtaccagtgtttactgacccat
gctgctaaccaacaagatgaagctgtgcagagcatctgggcgattctgggggagaacgag
gtgccaatcaagtccctggtggccgtgctgtccttctttgtcctggcggggaaagataaa
acggctaacgtccagcagagggtgagcggtctgcacgcagcctcactttacctgctgctg
ctgggaatcccagggagcatcgccaccaaggttttccacgaggttttgttggacacgtgt
tcagacctgacctctcactgctggcctgaggactctggaaagaagcgcaagaaggacggc
acgaagagctcccagacagacggcaaacgctccaaaccacagcgaagagaaacgtcagag
atggaagtggatggggcagaggaggaagaggaggaagaggagcttcatttcactgcaaag
gacttgatgaagatcagagacgctgtggttctcctggttcaaagcctcctcagactcctg
cagacgtttccgctcaagaacagaccccagagcgccggcaactgcacgcagatcttcagc
aagctcctttacttcgagccggtcatcggagagatgacctttgcggcattggacatcacc
aagctgaggagtgttcccgagatggctttccacggcctgcagctgctctgctcgccaaaa
cacggagaacagaaagaatccctgcggagggtcttccaccagctcctttacgtgatcctg
atgatgaagaagaaagacaacagagggaaaccctccctcctcgtacccagccaggccatc
caggccacccgcatccagaccctccgctttgtttgtcatcttgtggacgagctgaaggag
atggcgctgcctgtactccaaatcctcctgcagcatatctgcttccagatggtggagaag
agcgagtttcgaagccatggagcccaggctgtgggtatgttgacgtcccagatggaaact
gcagactatgtttgcttcatcaagtggctgtttaacttctccagaagctcaaagatggtg
ggccggctgttttctgtggacgtggtgatggttttgctggaacagcccgagaggagtttg
cgggagtgtcaggacccggagttctccttcttcctgtcgcacaagttcctgatccagaaa
ctgctgttcgatcggcggatggacgactcgcccacagtccaaggccacgccttggcctcc
ctcgcccagtgtctggagctgccctcgctcaacgccacccgggcagtctacaacctcttc
tctgccactggagcccagacagtgttggaaagcgaaattacagaaggtagccttagttcc
cagcagactcagaaaaccttccgcacgctgccgttcaggaccgtggagatcagcacctcg
gacagctccgactgtaacgcaaaagagaatctggctctgctcttgcggcgggtaaaagac
tcaaagataaacgtgaggaaatcggcgctccagaccctggttggtctcctgaaacataac
gtgatccctctgagctgggagaacctggctacgctgtcggagcgctgcagggacccggcc
gtgtcggtgaagaagaaggccctgcagtgcgtgggagagctgctcgccaccaaaccagag
tgcaccgtggtgcagaaggcgtggctgcagggagtggtgccagccgtggtggacccagag
aactcggtgcaggacaaggccctggaggctctggaccaggtgctgctcagccaggtcaaa
cagtactcggccagccaccaactggatggcagtcagaggctgacctgggacctgctgggc
ctgctctgcaacgagtgctggaacctcagccggtatttcagcagggcgttcaccatctgg
tccaaacagaacaagttcacacagacgctcatcaccaacctgatgtcccacacggaggcc
gagcacgccgccggcgcctggctgcttctctccaaggtcgtcccctcgtccctcaggctg
ccctacgggaagatcctgaacgcctgggagagcatgttcagttcaaaggacataactgcg
acgacctgctgtcacatactgtgtgtgatgggagacatcgccgggcatttaaacgaagac
accaaggacaggatagttgctgatctgatgtcttggttgaagacttttactttgtctctt
gaggtgatctgtgctgctgtggagactctttatcaattcggatgcagcgaagacatcaaa
gagactcaggcttttctaaaccagcactgcggggagctggtgtcggtgtccgaggcttat
ttagccggcatcatcctgagagaaaagggagcccagaacctcaacgaggagctgatggtg
aaacacctccacactctgggtgtggtgtcactccactgtcccgccaaggtcggcaaaagg
acggtgctgctggtggagtccgtgttgacaacacattctgaccaactggcagagtgccaa
gaagagctgccggtgtcgctgcctctgtcccagttcaaagcaaactctctgcctacccga
gtcagagcacacggagtcatcactttaggcaaactgtgtctgcagcacgaggaactcgtc
cagaagtacctgccggtgtttgccagggagctggagctcggcacggaggttgccgtgcgc
aacaatgtggttgtgattatgtgcgatctgtgtgttcgatacaccaacatcgtggatcac
tatatccccaacatctccgcttgtctgcgagacagtgaagctatcatcagggagcagact
ctcatcatgctgaccaacctgctgcaggaggaatttgtgaaatggaaaggcgccctcttc
tttcgcttcatggtgacgctggttgacccggtccctgccatcgccagtctgtgtgagtac
tgcctgctccacctgctgctgaaaaagaacccagaaatgttcagccagcacttcattgag
tgcatcttccacttcaactcctacaacaaacacaagtcttacaacaagttccctgaaagt
gagagagaaaaggttcggttctccctgaaaggagatcagcaccgcgagaagcgttttcgg
atctaccgcttcctgttggagcacttcacggacgcccagcgcttcaacatcaccgtcaag
atcaaccagaccattttagcatgctttgcggacgaggagatgcagttggatgcggatggt
gctgagattttgtccgagaccttcaaaatcttgagtctgaaggagatgaagctgcaggcc
atatctactccagcaggaggcgccgcaggggaggaagcggaggaggagaacatggccacc
atggcaaaggctgtcctgctggtggcgcagaagaaggtggtgtctcaggtccagaagaag
gctttcatagagaacacggttcctctcatcatcggcctgaagagcctgctggagcagaag
cgctcgcccgtcctccgagacctcatggcttaccttcaggtgacaatgcaagactaccgc
aacgaggtcaaggagtttttctctggagacgagcagctggcggcggagctggagtttgct
ctgaagacggctgagaaggaaagaaagattgcggagcagatggacaactgcagtttgaca
ggagagaccaggactcctactgcacagtgttcaacccagggctctcccgtcaggtccagg
cccctcccattagtctttgccacgccacagccgccacgtccaaaccccctctctaccaga
ctggcatacactgacaggcgtgtgaacagttccaggtgggaggaacatgtgcagactaag
tcgatgggtctggaaggaacagtgatgcaaaaaggagttgtggatgacagagccatcagc
acacccaaaggagtcggcatcaatctgacgttcgatgaaggagtcagcgcaatcttcagt
gaccgacgaccaagtgttgtcggggagaccagtgtccttcatatgcggtcagatgagcag
caagctcctggactgaggcagtgggacgtgcagtctcctctccgccagagaaaaaagtcc
tttaaagtttag
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