Pseudoliparis swirei (Mariana hadal snailfish): 130207603
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Entry
130207603 CDS
T09868
Symbol
msx3
Name
(RefSeq) homeobox protein MSH-C
KO
K09341
homeobox protein MSX
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130207603 (msx3)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
130207603 (msx3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
HTH_NDX
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130207603
NCBI-ProteinID:
XP_056292225
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Position
17:complement(12210126..12212416)
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AA seq
262 aa
AA seq
DB search
MAPQTCVMNPAQGSPLAAAPGETSPEDRLAAGIQTDELDLSSARKSKTKSVDLPFSVESL
ISDRTPDRTLHSPEPGSGCVRTEETECASPRGLCRCKPEAMDLSDKETSPWYQAPHASPT
SDSLNIPGLPSPASCNLRKHKNNRKPRTPFTTSQLLSLERKFRQKQYLSIAERAEFSNSL
SLTETQVKIWFQNRRAKAKRLQEAELEKFKLAAKPLLPAFAFPFPLSASMGAPSLYGALN
GPRPAFPVPGLFGGPYGMYYLS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcacctcagacgtgcgtgatgaatcctgcgcagggatcaccgctcgcggctgctccg
ggggagacctcaccagaggaccggctcgctgctggcatacaaactgacgagctggacctg
tcatccgccagaaagtctaaaaccaaaagtgtagatttacctttcagtgtggaatccctc
atatcggaccggacgccggacagaaccctgcactcacccgagccgggttcaggctgcgtc
cggaccgaggagacggagtgtgcgtcaccgagaggactttgtcggtgcaaaccagaagcg
atggatctcagcgacaaggagacgagcccctggtaccaggctcctcacgcatcccctaca
agtgactctctaaacattcctggacttcccagcccggcctcgtgcaacctacggaaacac
aagaacaacaggaaacccagaactccctttacaacctctcagctgctttctctggagagg
aagttccgtcagaaacagtatctctccatcgcagagagagcagagttttccaactctctc
agcctcacagagacccaggtcaagatctggtttcagaaccgcagggccaaggccaagagg
ctgcaggaggccgagctggagaagttcaagctggccgcgaagccgctgctgccggccttc
gcctttcccttcccattgagcgcatctatgggcgcaccgtccctttacggggccctgaac
gggccgcggcccgccttccccgtcccaggactatttggtggaccttatgggatgtactac
ttgtcttaa
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