Pseudoliparis swirei (Mariana hadal snailfish): 130207634
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Entry
130207634 CDS
T09868
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130207634 (btaf1)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
130207634 (btaf1)
BRITE hierarchy
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
130207634
NCBI-ProteinID:
XP_056292286
LinkDB
All DBs
Position
17:complement(1793460..1823632)
Genome browser
AA seq
1863 aa
AA seq
DB search
MWVGGRPVQEATMAVSRLDRLFILIDTGTTPVTRKAAAQQLGEVVKLHPHELNTLLSKIL
TYLRSPNWDTRIAAGQAVEAIVKNIPEWDPTPKPKEESGDDSSPDDSSCDRLSFYHFDIS
RLLKHGASLLGSAGAEFELQDDATGEIDPKERLARQRKLLQKKLGLDMGAAIGIDTEELF
NDEDLDDSGGPRAHGSKATAGSSAHNNLPLQAAELIDSEFRPGMSSRQKNKAKRMAKLVA
KQRSKDMEPNEKSNDSFEGEPEEKRRKTSNAVADQATESKASTDNVPEGSGVLEEEWPLE
SFCEELCNDLFDPSWEIRHGAGTGLREILKSQGAGGGKLAGSTAAQMSRQHQEWIEDVVI
RLLCVFALDRFGDFVSDEVVAPVRETCAQTLGVALRHMNETGISMIVDVLLKLLQEDQWE
VRHGGLLGIKYALAVRQDLISVFLPRVLPAITVGLQDLDDDVRAVAAASLIPVVEGLMQL
LPHKIPFIVNTLWDALLDLDDLTASTNSIMTLLSSLLTYTQVRQSSMQQSLTVLVPRVWP
FLRHTILSVRRAALETLFTLLSKADESCAMWINPILQEMLRHIFQSCILESNEEILELIQ
RVWMELLSRAPQQYVVAASCPWMGAWLCLMMQASQIPIDVNMLLEVKARCCKDKAGAKAR
QGTIQVKEVTQEYIAGAETVTDDPLTRDYVVIRSRLMAAKLLGALCRCICDPQLNAASQE
IRPAESLGQLLLFHLNSKSALQRIAVALVLCEWAAMRKDCQVVSLMVQPRLLAILSEHLY
YDEIAIPFTRMQNECKQLIALLADAQIDLQDRLNCSVFTIDQANDLVTTIFTESTAGLNV
NSAQFQALDGKRQQAQATVTETDMDWQQLHLRVHMVTACAVINLQALPEKLNPLVRPLME
TVKREENTLIQGYAASFIAKLLQQCAGRSPCPNHKILKNLCASACIDSAVTPSAACPVPP
TLDNAKGSGLEKDCTYHMVNKTRGIITLYLHQRAAFAITSKRGPAPKAPKNLTTELPPGS
TICIDNDESKKPFLIQRRGAEFSLTTVAKHFGADFATSLPYLWENTVGPLRMVVTGDHQI
DGQLQLERGDAAAQELVNSLQVLEVMAGAMAAELKPLLLEHLPHLFTCLQHPYTAVRHMA
ARCVGVLSKIAMLETMTGFLECVLPWLAAIDDCTKQEGAIEALACIMEQLDVDIVPYIVL
LVVPVLGRMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERHFLEQ
LLDGRKLENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILA
GDYYLRAQEYARTKAPDSSPLPSLVLCPPTLTGHWVDEVAKFCTKEFLNPLHYTGPPTER
MRLQQQVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAAN
FRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGV
LAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVED
SISSTAPEEEEDKPKLKATGHVFQALQYLRKLCNHPSLVLTPQHPEFKRISAQLAAQSSS
LRDLQHAPKLSALKQLLLDCGLGGGGGPDGGAEAVVAPHRVLVFCQLKSMLDIVEMDLLR
PKLPTITYLRLDGSVPAGQRHAIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEH
DWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKISIANTVISQDNASL
QSMGTDQLLNLFSLDKGEKGEPVGAAASGKSSMKSVLDGLGELWDQQQYDTEYNLDSFMH
SLQ
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgggaggaaggccggttcaagaagcgaccatggcggtatcgagactcgatcgt
ttgtttatcttgattgacaccgggacaacaccagtgaccaggaaagcagcggcccagcag
ctcggagaagtggtgaaactccacccacatgaactcaataccctcctgtcaaagattttg
acctacctaagaagtcccaactgggacactcgaatagcagcaggccaagctgtcgaggcc
atcgtaaagaatattcctgagtgggacccgacgcccaaaccgaaagaagagtccggtgac
gactcgtctccagacgactcctcttgtgaccgcttgagtttctaccacttcgacatctcc
cgcctcctcaagcacggcgcctctctgctgggatccgcgggcgccgagtttgagctgcag
gatgacgcaaccggtgagattgaccctaaagaacgtctggcccgccagaggaagctcttg
cagaagaagctgggtctggacatgggcgccgccatcggcatcgacaccgaggagctgttc
aacgacgaggacctggacgacagcggcgggccgcgggctcacgggagcaaagcaaccgcc
gggtccagcgcccacaacaacctgccccttcaggccgccgaattgattgactctgagttc
cggcccggcatgagcagtcgccagaagaacaaggccaagcggatggccaagctggtggcc
aagcagcggtccaaagacatggagcccaatgaaaagagtaacgacagcttcgagggcgag
ccggaagagaaacgaaggaaaaccagcaacgctgtcgccgaccaggcgacggagagcaaa
gcctcgacggacaacgtccctgaaggcagcggcgttttagaggaggagtggcctctggag
agcttctgcgaggagctctgcaacgacctcttcgatccgtcgtgggagatccgtcacggt
gcaggcacgggtcttagagaaatcctcaagtcccagggcgccgggggcgggaagctggcg
ggcagcacggcggcgcagatgtcgcggcagcaccaggagtggatcgaggacgtggtcatc
cggctgctctgcgtcttcgctctggaccgcttcggagacttcgtgtcggacgaggtggtg
gcgccagtgagggagacgtgcgcccagacgctcggcgtggctcttcgccacatgaacgaa
accggcatttccatgatagtcgatgtcctgctgaagcttttacaagaagaccagtgggag
gtccgtcacgggggcctcctcgggatcaagtacgccctggccgtccgacaggacctgatc
tcggtcttcctgccccgggtgctcccggccatcacggtgggcctccaggacctggacgac
gacgtcagggccgtggcggccgcctccctcatcccggtggtggagggcttgatgcagctg
ctgcctcataagatccccttcatcgtgaacacgctgtgggacgctctgttggacctggac
gacctcacggcgtccaccaacagcatcatgacgctgctctcctcgctgctcacctacacg
caggtccgccagagcagcatgcagcagtcactcaccgtcctggtccctcgggtttggccg
ttcttgagacacaccatattgtcagtgaggagggcggcgctggaaacactcttcacgctg
ctgtccaaggccgacgagagctgtgcaatgtggatcaaccccatcctgcaagagatgctg
cggcacatcttccagtcctgcattctggagagcaacgaggaaatcctggagctcattcaa
agggtgtggatggagctgctgtctcgagccccgcagcagtacgtggtggcggccagctgc
ccgtggatgggcgcctggctctgcctcatgatgcaggcctcgcagattcccatagacgtc
aacatgctcctggaagtgaaggctcgctgctgcaaggataaggccggtgcgaaggcccgt
caggggaccatccaggtgaaggaagtcactcaggagtacatcgccggagcagagacggtg
accgacgacccgctcaccagggactacgtggtcatccggtctcgcctcatggctgccaaa
ctgctgggcgctctgtgtcggtgcatctgcgaccctcagctcaacgctgcgtctcaggag
atccgcccggccgagtctctgggccagctgcttctcttccacctcaactccaagtccgcc
ctgcagcgcatcgccgtggctctggtgctctgcgagtgggccgcgatgcggaaggactgc
caggtggtgtcgctgatggtgcagcctcgccttctggccattctgtcggagcacctgtac
tacgacgagatcgccatccccttcacgcgcatgcagaacgagtgcaagcagctcatcgcg
ctgctggccgacgcccaaatcgacctgcaggaccgcctcaactgcagcgtgttcacgatc
gatcaggccaacgatctggtaaccaccatcttcacggagtcgacggccggtctgaacgtg
aactccgcccagttccaggcgctggatggcaagcggcagcaggcccaggcgacggtgacg
gagaccgacatggactggcagcagctgcacctgcgcgtccacatggtcacggcgtgcgcc
gtcatcaacctgcaggcgcttcctgagaagctcaacccgctggtccggcccctgatggag
acggtgaagcgggaggagaacaccctcatccagggctacgccgcgtccttcatcgccaag
ctgctgcagcagtgcgccggacgctcgccgtgccccaaccacaagatccttaagaacctg
tgtgcctcggcctgcatcgactccgcggtcacgccctcggccgcctgccccgtccccccc
acgctggacaacgccaaaggcagtgggctggagaaagattgcacttatcacatggtcaac
aaaacccgcggcatcatcaccctgtacctccaccagagggcagcgtttgccatcaccagt
aagaggggcccggcccctaaagcccccaagaacctcaccacggagctccctcccggcagc
accatctgcatcgacaacgacgagagcaagaagccgtttctcatccagaggcgaggagca
gagttctccctgacgaccgttgccaagcacttcggcgcagacttcgccacgtctctgccg
tacttatgggagaacacggtggggccgctgaggatggtggtgactggagatcatcagatt
gacgggcagctccagctggagaggggagacgctgcagctcaggagctggtcaactcccta
caggtgctggaggtcatggccggggccatggcggctgagctcaagcctctgctgctcgag
cacctcccccatctgttcacctgcctgcagcacccgtacaccgcggtgcgccacatggcc
gcccgctgcgtcggcgtgctcagcaagatcgccatgctggagaccatgaccggcttcctc
gagtgcgtcctcccctggttggccgccatcgacgactgcaccaaacaggagggagccatc
gaggcgttggcctgcatcatggagcagctggacgtggacatcgtgccctacatcgtgctg
ctcgtggtgccggtgctcggccgcatgagcgaccccagcgacagcatccgcttcatggcc
acgcagtgcttcgccacgctcatccgcctgctgcccctcgaggccggcataccggacccc
cccgccatgtccgccgacctgatccgccagaaggccagagaacgccacttcctggagcaa
ctgctagacggcaggaaactggagaactacaagatccccgttcccattaaggccgagctc
aggaagtaccagcaggacggagtgaactggctgtccttcctcaacaagtacaagctgcac
ggcatcctgtgtgacgacatgggcctcggcaagacgctgcagtccatctgcatcctggca
ggagactactacctcagggctcaggaatatgcccggaccaaggccccggacagcagcccg
ctgccctccctggtgctgtgtccgcccacgctcaccggccactgggtggacgaggtggcc
aagttctgcaccaaagagttcctcaacccgctgcactacaccgggccgcccacggagcgc
atgaggctgcagcagcaagtgaagaaacacaacctggtggtggcgtcatacgacgtcgtc
cggaacgacatcgacttctttaggaatatcaaattcaattactgcatcctggacgagggt
cacgtgatcaagaacgggaaaaccaaactctccaaagccatcaagcagctggcggccaac
ttccggatcatcttatcgggaacgcccatccagaacaacgtcctggagctctggtccctg
ttcgacttcctcatgcccggcttcctgggaacggagcggcagttcgccgcccgctacggg
aaacccatccttgccagccgggacgccaagagctcctcgcgggagcaggaggccggtgtg
ctggccatggaggccctccaccgacaggtgctcccgttccttctgaggaggatgaaggag
gacgtcctccaggacctccccccgaagataatccaggactactactgcaacctgagtcct
ctccaggttcagctgtacgaagactttgcaaagtcccgggcgaaggccagcgtggaggac
agcatctccagcacggcccccgaggaagaggaggataagcccaaactgaaggccacgggc
cacgtcttccaggcgctgcagtacctgaggaagctgtgcaaccaccccagcctggtgctg
acgccgcagcaccccgagttcaaacgcatcagcgcccagctggcggcgcagagctccagc
ctgagggacctgcagcacgcgcccaagctgtccgccctcaagcagctgctgctggactgc
ggtctgggcggtggcggcgggccggacggcggcgccgaggcggtggtggcgccgcaccgc
gtgctggtgttctgccagctgaagagcatgctggacatcgtggagatggacctgctgcgg
cccaagctgcccaccatcacctacctgcggctggacggcagcgtgccggccggccagcgc
cacgccatcgtctccaggttcaacaacgacccgtccatcgacgtgctgctgctcaccacg
cacgtcggcgggctcggcctgaacctcacgggcgccgacaccgtggtgttcgtggagcac
gactggaaccccatgagggacctgcaggccatggaccgggcccaccggataggacagaag
cgcgtggtgaacgtttaccggctgatcacgcgcggcacgctggaggagaagatcatgggt
ctgcagaagttcaagatcagcatcgccaacaccgtcatcagccaggacaacgccagcctg
cagagcatgggcacggaccagctgctcaacctcttcagcctggacaagggggagaagggc
gagccggtgggagcggcggcctcggggaagagttccatgaagtcggtgctggacggcctc
ggggagctctgggaccagcagcagtacgacacggagtacaacctggacagcttcatgcac
tccctgcagtag
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