Pseudoliparis swirei (Mariana hadal snailfish): 130207650
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Entry
130207650 CDS
T09868
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130207650 (tial1)
03041 Spliceosome [BR:
pswi03041
]
130207650 (tial1)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130207650 (tial1)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130207650 (tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_10
RRM_Nup35
Rodlin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
130207650
NCBI-ProteinID:
XP_056292316
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All DBs
Position
17:complement(565875..571191)
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AA seq
383 aa
AA seq
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MDDESYPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDA
AAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAAFG
KISDARVVKDMTTGKSKGYGFVSFYNKLDAENSIINMGGQWLGGRQIRTNWATRKPPAPK
SVQDNGSKQLRFDDVLTQSSPQNCTVYCGGIQYGLSEHLMRQTFSPFGQIMEIRVFPEKG
YSFVRFSSHDGAAHAIVSVNGSAIEGHVVKCFWGKESTDVAKSPQQVEYGQWGQWNQVYG
NPQQQQQQQQQQQQYGQYVTNGWQVPSFNMYSQTWNQQGFGVEPSQSPSWVEGFGSQSGQ
AAAPPAQVMSNMANFSMAGYQAQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaaagctaccccaagaccctgtacgtggggaacctctccagggacgtcacg
gagatcctgatcctgcagctcttcacccagatcggaccctgcaagagttgtaaaatgatc
acagagcacacgagcaacgacccctactgcttcgtggagttctttgaacacagagatgct
gctgcggcgctcgccgccatgaacgggaggaagatactcggaaaggaggtgaaagtaaac
tgggccaccactccaagtagccagaagaaagacacatccaatcacttccacgtgttcgtg
ggcgacctgagccctgagatcaccaccgaggacgtcaaggctgcatttgcagcttttggg
aaaatctcggacgcccgggtagtgaaggacatgacgacgggcaaatcaaaggggtatgga
tttgtgtccttctacaacaaactggatgcggagaattccatcatcaacatgggggggcag
tggctgggggggcgccagatcaggaccaactgggccacgcggaaaccaccagcgccgaag
agtgtccaggacaatggatcgaagcagctgcggttcgatgacgtgctgactcagtccagt
cctcagaactgcaccgtgtactgtggagggatccagtacggactgtcggaacacctcatg
cgtcagaccttctccccgtttggtcaaatcatggaaatccgagtgttcccggagaaagga
tactcgttcgtcaggttttcctcccacgacggagccgcccacgccatcgtgtcggtgaac
ggctcggccatcgagggacacgtcgtgaagtgcttctggggaaaagagtcgacggacgtg
gcgaagagtccgcagcaggtggagtacggtcagtggggtcagtggaatcaggtctatggg
aatccacaacaacaacaacaacaacaacagcagcagcagcagtacggacagtacgtgacc
aacgggtggcaggttccctccttcaacatgtacagccagacgtggaaccagcaaggcttc
ggagtggagccgtcccagtccccgtcctgggtggagggcttcgggtcccagtccggccag
gccgcggcccccccggcccaggtcatgtccaacatggccaacttcagcatggccggctac
caggcgcagtga
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