Pseudoliparis swirei (Mariana hadal snailfish): 130207714
Help
Entry
130207714 CDS
T09868
Symbol
cacna2d2a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2a isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04260
Cardiac muscle contraction
pswi04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130207714 (cacna2d2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130207714 (cacna2d2a)
04261 Adrenergic signaling in cardiomyocytes
130207714 (cacna2d2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130207714 (cacna2d2a)
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130207714 (cacna2d2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
MCP-like_PDC_1
vWA-TerF-like
DASH_Spc19
dCache_2
Motif
Other DBs
NCBI-GeneID:
130207714
NCBI-ProteinID:
XP_056292350
LinkDB
All DBs
Position
18:complement(12303042..12449924)
Genome browser
AA seq
1113 aa
AA seq
DB search
MAICAPSYGIFCLFTIQTVLIICVSTPTDGTHLFPQHYTMIHWAGRIEKELETVLQQVTG
TQQMRSIYNEKKSQFEIKRNNPKDLVDRVARDIAKLLNSKRKALEKLAREAEQLQKEHVW
QDGVTESAISYYDSKADSDYPEDGEEENPLESATSLELEFVDDPNFKNKVNYSSSAVQIP
TDIYKGSPVILNELNWTQALERVFIENRKEDSSLRWQVFGSATGVTRYYPATPWKAPKKI
DLYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLMKTSVEKMLDTLSDDDYVNVAT
FNEKADAVFPCFRTLVQANARNKKIFKEAVRHLQAKGTTDYKSGFTFAFEQLLNESSAPR
ANCNKMIMMFTDGGEDRAQDIFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYY
FEIPSIGAIRINTQEYLDVMGRPMVLAGNKAKQVQWTNVYHDALGLGLVITGTMPVFNLT
ADTASSQNQLILGVMGVDIAINEIKRKTPTYRLGANGYTFAIDPNGYVLLHPNLQLKVNN
FRESVTLDFLDAELEDSNKEEIRRQMIDGKPGQKKIKTLIKSVDERYIDEAMRTYTWTPV
DGTDYSLGLVLPTYSENHIKANLSDQILQVQLPNTKDFESLLPNSFESEGHVFIAPREYC
NDLELSNNNTEFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWKNKDLNT
YGFLAVFAASDGGVTRVFPNKAAESWEEDPEPFNANYYRRSLDNKGYIFQAPYRRTPRDD
QQNPENDTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWTDKFKILASNHTDSRQGSNT
CGPNKGCEMDCEANSEDLLCYLVDDGGFLIMSNQKDDWNMVGMFFSDVDPYLMYALYNNS
FYKSKRSFDYQSVCERIPNSEAGAAPRGVFVPTIADFVNVAWWTSAAAWSLFQQFTYGLA
YHSWFVTDEVNAEGMDSKERSCVMIQTQYYLSNLSSSYNILQDCGNCSRLIHAKKINNTN
LLFVVAEKMPCNTCEIEKLSQEEEEFKEENPCEELTVARYRKGPSTCFDNNNSENTSDCG
RGHSFRPSLYTLLLIQLLLLYPAVSPHCRSLLH
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgcgccatcgtacggtatcttctgcctcttcaccatccaaacagtactt
atcatatgcgtctccacgccgacggacgggacccacctcttcccccagcactacacaatg
attcactgggcaggacgcatcgagaaggagctggagacggttctgcagcaagtcaccgga
actcagcagatgagatcgatttataatgagaagaagagccagtttgaaatcaagagaaac
aaccctaaagacttggtggatcgagtggcccgggacatcgccaagctgctcaacagtaag
aggaaagccctggagaaactggccagggaggcggagcagcttcagaaggaacatgtatgg
caagacggtgtaacggagagtgccatttcatactacgattccaaagcggattcagactat
ccggaggatggagaagaggagaacccgctggagagcgctacgtctttggagctggagttt
gtggacgatcccaattttaaaaacaaggtcaactactcttccagtgcggtccagattcct
acagacatatacaaaggctcccccgtcatactaaacgagttgaactggacccaggcactg
gagagggtcttcattgaaaaccgcaaggaggacagctctcttcgctggcaggtgtttggc
agtgccacaggagtgactcgatattacccagccactccatggaaggctcccaaaaagatt
gacctgtacgacgtccgcagaagaccttggtacatccagggtgcatcgtctccaaaggac
atggtcatcattgtggatgtgagtggaagtgtgagtggactcactctgaaactgatgaaa
acctctgtagagaagatgctggacactctgtcagatgacgactatgtgaatgtggccacg
ttcaatgagaaggccgatgctgtctttccgtgcttcaggactttagtccaagccaacgct
cggaacaagaagatcttcaaagaggccgtcaggcatttgcaagccaaaggaaccaccgat
tataagtctggcttcacatttgcctttgaacagcttctcaatgagagcagcgccccgagg
gccaactgcaataagatgataatgatgtttacagatggcggggaggatcgtgcacaggat
atctttgagaagtacaactggcctaacaaaacggtccgtgtcttcaccttctctgttggc
cagcataattatgatgtcacccctttgcagtggatagcttgtgccaataaaggttactac
tttgaaattccatcaatcggcgccatcagaatcaacacccaggagtacttggacgtcatg
ggtcgtcccatggtgctggctgggaataaagcaaagcaggtgcagtggacaaacgtctac
catgatgctctgggtttgggccttgtcatcactggaacgatgccggtcttcaacctcact
gctgatactgcaagctctcagaaccagctcatcctcggagtcatgggagtagatattgca
attaacgaaatcaaaaggaagacacctacatacagacttggagccaatggctacaccttt
gccattgacccgaatggctacgtactgctgcatcccaaccttcaactcaaagtcaataac
ttcagggagtccgtcactctggactttctggatgcagagttggaggacagcaacaaggag
gagatccgtcgacagatgattgatggcaaaccagggcaaaagaaaatcaagacactcatt
aagtcggttgatgagaggtacatagacgaggccatgcgtacgtacacatggacgcctgtg
gatggcacagattacagtctagggttggtactgcccacatatagcgagaaccacatcaag
gccaaccttagtgaccagatccttcaggtgcagttgccaaacaccaaggattttgaatca
ctgctgccaaacagttttgagtctgaaggacatgtattcattgctcccagggaatactgc
aatgatctggaactgtccaacaacaacactgagttcctgctcaacttcattgctctcatg
gagaaggtgacaccagactccaaacaatgtgacaatttgctccttcataacctgattctg
gacactggcatcatcaggcagctggtcgagaaagtgtggaagaataaagacttgaataca
tatggctttctggctgtgtttgctgcctcagatggcggtgtcacacgagtgtttccaaac
aaggctgcagaatcctgggaggaggaccctgagccgtttaatgccaactattaccgccgc
agtctggacaacaagggttacatcttccaagcgccttatcgtcgaacaccccgggacgat
cagcagaacccagagaacgacaccatcgggatcctggtgagcacggctgtggagatcaca
gttggagggaagaccatcaaacctgcagtggtcggtgtgaaactagaccttgaagcctgg
acagataagtttaagatccttgcaagcaaccatacagacagccgtcagggctcgaatacg
tgtggaccaaacaagggctgtgaaatggattgtgaagccaacagtgaggatctcctgtgt
tatttagtagacgatggtggattcctcatcatgtctaatcagaaggacgactggaacatg
gtcggcatgttcttcagtgatgttgatccctacttgatgtacgcgctctacaataactcc
ttctacaaaagcaagcggtcatttgactaccagtctgtgtgtgaacggatacccaacagt
gaagctggggctgcacccagaggagtgtttgtgcccacaattgcagattttgtgaacgtg
gcttggtggacatcagcggctgcatggtctttgttccaacagtttacatatggattggct
tatcacagctggttcgtcacagatgaggtgaatgcagaaggaatggactccaaagagcgg
agttgtgtaatgatccagacccagtactacttaagtaatctcagcagctcctacaacatc
ctgcaagactgtggcaactgctccaggctgattcatgccaagaagataaacaacaccaac
ttgctgtttgtggtggcagagaagatgccatgcaacacctgcgagatagaaaagctgtcc
caggaggaggaggagttcaaggaggaaaatccatgtgaagaattgactgtggcgcgctat
cggaaaggaccctccacctgctttgacaacaataactctgagaacacatccgactgtgga
cggggacactccttccgtccgtccctctacaccttactgctcattcagctgcttctgctt
tatccagccgtcagcccccactgtcgctctctgctacattaa
DBGET
integrated database retrieval system
