Pseudoliparis swirei (Mariana hadal snailfish): 130207783
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Entry
130207783 CDS
T09868
Name
(RefSeq) rho guanine nucleotide exchange factor 40-like
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130207783
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
130207783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
PH_10
IQ_SEC7_PH
DUF2935
Motif
Other DBs
NCBI-GeneID:
130207783
NCBI-ProteinID:
XP_056292457
LinkDB
All DBs
Position
18:complement(28365625..28407325)
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AA seq
1836 aa
AA seq
DB search
MNPESLDSSIQGALSALFPPFEATAPIVLGQLFRTIEERYRGDALQCLLDFLIPSKHLLE
SVQQAACAGYSDVVFRCEGWPLCLRDKTVIQLAPVNPLLLRPGDFYLQVEPFGDQAARVV
LKSLLEEGRGEVEETPVPEASYPCIFTEEWLRDINEGRSGTPLSRCLLCTDQGAIKLPWA
EIAVPEFLDKPKIAPPTYREAPPEPKRIPAPSLFNFSTLPMEAALIPMKERMPAASLRPV
HGSSKLVKMDHERRTSKSCSRSLIKPVGWVAPNNWDSHNYREIEGDYVDLVDIATGNELV
TKQRSSHPPSSVVFKPVRPPPPIPLGTRVPCGSTLRCAEEAGPPCRLEHDPSDQDLKCRY
RDSYVAALRNPVAFERGGVDLMAALEEGGGLSEEAELRVQVVLEAQREKLVNRCKHCNKP
AARDEPCRCRRCCEAESFASHLQDLPTSSESEHEVMKESPTIFKSTPGLSQSHKVQMKLI
SHQSGPNAGVRPGPDGDVTPPQEVEVATPSGKHKVKGRSLSTVSETCEGNPLLYKVNNRS
HSDICPETISSIVQGKKADLMDQVTLKLERLKSPKKDSHRSEPPPSSADGPDSKKLHNSK
MEKPSLAQVQLQPSDPPPPPQAEESGFRGVRGTLELGIICLPGSRDRTGRAVVEVHGGRK
EWTSTLVSVQSVCKLLLYLHSIPRKEVRELGMTLVLDARRKPPSLHLYKALLMAQEHALH
AVHSIVMLVDKDTCPRPEKHPGLQMDLVTSMKALNKTVEASQLTSDLGGTLTYSHSDWLQ
FHQRLLSFLAELRGADSLLQKAIKKVDGSKTTDSSQEVQRCIGEQEASMKEVLEDSRLVT
LQREGGAVVARMRREEFRFPLSEDYRDAVESVSSLYNQVEEKLHTLVMRSNESLQHLDFL
FKLREMEAAITTAGLWFSGEGEQRLELRHSADDTPMAAEDAARRFDEFLAESKDKHQRAL
SLAAEAKALVAAGDAGPAADVFRTLVDTFKSNVDDFTLRAERRRRELETERVQRFSEQAC
ALAQECRGFLQQVESGCDPAQTLRTLHMYEERLGGEFSTLHFQALKDKACAGAPGASGAS
GAPGAWGPMGVWNAARIQCQEVGQRLKELQQKEKGGDEKQNQPNTAAKPQGEVGMGKEEK
GREAGEAGEAGEGGRSLTQPPTFQKEVVHVSEGEGETTAVACVGHHDEPDSKGENGERES
AEVQTENVEREEFPKHVDRPPETRRRSEADLRSAAAVEGGVGFPLHRLRGRSLSEGSSLR
RRLTSVSGFSPLNVRHKHCGSDTPEQNLQNVQQNLRDEEEGGGYANVTQSPRGLRTPETF
LTARELTGGNVLKVRLIMEELLSTEREYVKALGYVREHYLSELERPNVPQGLRGQRASVF
GNLEKLHDFHRHHFLHELERCADEPFRVGRCFLRHRESFALYALYSKNKPQSDGLLTDHG
QAFFKHKQLQLGDKMDLRSYLLKPVQRISKYSLLLQDLRAECGAGRPRETAEVKAALEVV
HFQLHHGNNLLAMDAIHHCDVNLKEQGQLIRQDEFTVTFRKRKCLRHVFLFQELILFSKT
RKTDVGNETYIYKQSFKTSDVGMTQNSGDSGLVFEIWFRKRKTQDTYRLQAAGREAKDAW
TRDLERILWEQAVHNREVRMQEREFMGIGNKPFMDIQPSDAAISDRAVSYPMLGRENRAL
PSTDSSDSRDGLPGGRPRSVGSGCSSSSSGRGSLVGYVRGPRWRGAGGGGLGGYGCPPGA
LEEDDLDHESGIHNLLLDSSESSGESVSGFSSSGLSFHSAAGGEVEDASFTAKEAGPPER
TPPAVAPKPKTRPQDRARDPLRGEVQNTSVGKSTEV
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggagtccctggactcgtccatccagggcgccctctcggccctcttcccgccg
ttcgaggccacggcgcccatcgttctcggccagctgtttcgcaccattgaggagcgttac
cgcggcgacgcgttgcagtgtctgctggacttcctcatcccctccaaacacctgctggag
agcgtgcagcaagcagcatgtgccggatactctgacgtggtcttccgctgtgagggctgg
cctctgtgcctccgggacaagaccgtcatccagctggcgcccgtcaacccgctgctgctg
cgccccggagacttctacctgcaggtggaacctttcggggaccaggcggctcgcgtggtc
ctcaaaagtctcctggaggagggtcgcggcgaagtggaggagacccccgtgcccgaggcc
tcctacccttgcatcttcaccgaggagtggctgcgggacatcaacgagggccgcagcggg
acgccgctgtcgcgctgcctgctctgcacggatcaaggggcgatcaagttgccctgggcg
gagatcgccgtcccggagttcttagacaagcccaagatcgcgccgccgacttatcgggaa
gctcctcccgagccgaagcggatcccggccccttcccttttcaacttctccaccctgccg
atggaagccgctttgattcccatgaaagaaaggatgccagcagcgtctttgagacccgtg
cacggctcctccaagctcgtcaagatggatcacgagaggcggacctccaagtcgtgctcc
aggtctttaatcaaacccgtgggttgggttgctccgaacaactgggacagtcacaactat
cgggagatcgaaggtgactacgtagacctggtggacatcgccacgggcaacgagttagtc
accaaacagaggagcagccatccacccagttcagttgtgttcaaacccgtcagaccgccg
ccccccatcccattggggactcgtgttccttgtggaagcacgcttcggtgtgcagaggag
gccggtccaccatgcaggctggagcacgaccccagtgaccaagacctgaagtgtcggtac
cgagactcgtacgtggccgcgctgaggaacccggtcgccttcgagaggggcggggtagac
ctcatggccgccctggaggagggcggcggcctgagtgaggaagcagagttgagagtccag
gttgtattagaagctcaaagagagaaactcgtcaaccgctgtaagcactgtaacaaaccc
gcggcgagagacgagccgtgccggtgcagacgctgctgtgaagcggagagctttgcgtct
cacctccaagaccttcccacgagttctgaatcggaacatgaagtcatgaaggaatcgccc
accatctttaaatccacccctgggttgagccagagtcacaaggttcagatgaagctcatt
tcccaccaatcgggacccaacgccggcgtgcgtccgggaccggacggcgacgttacaccg
cctcaggaggtggaggtggcgacgccgtcggggaaacacaaagtcaaggggaggtctctg
tccacggtgtcggagacgtgtgaagggaatccgctgctctacaaagtgaacaacaggagc
cacagtgacatctgcccggaaaccatcagcagcatcgtccagggcaagaaggcggatctg
atggatcaggtgacgctgaagctggaacgactcaagtccccgaaaaaagactcacacagg
agtgaacctcctccctccagcgcagacggacccgactccaaaaaactccataactcaaag
atggaaaagccgtctcttgcacaagttcaacttcaaccttccgaccctcctccgcctcca
caagccgaggagtccggcttcagaggcgtccgcgggacgctggaactgggcatcatctgt
ttgccaggcagcagggaccggacgggccgggcggtcgtcgaggtccatggaggccgaaag
gagtggacgtccactctcgtgtccgtccagagtgtctgtaaactactgctgtacttacac
tccatcccgaggaaagaggttcgagagctggggatgactttggtcctcgatgccaggagg
aagcctccttcactgcacctctacaaagctctgctcatggcccaggagcacgcgctgcac
gccgtccacagcatcgtgatgctggtggataaagacacgtgtcctcgccctgagaagcat
ccggggttacagatggacctggtgacttctatgaaagccctgaacaagacggtcgaagct
tcccagctgacctctgacctgggcgggaccctcacttacagtcacagcgactggctgcag
ttccatcagaggctgctctccttcctggctgagctgcgaggagccgacagcttgttgcag
aaggccatcaagaaagtggacggcagcaagaccaccgactcgtcccaggaggtgcagcga
tgcattggggagcaggaggcctccatgaaggaggtgctggaagactctcgactggtcacc
ctgcagagagaaggaggcgccgttgtggccagaatgaggagggaggagttcaggttcccg
ctctctgaggactacagagatgctgtggagtcggtgagcagcctgtacaaccaggtggag
gagaagctccacactctggtcatgaggtccaacgagtccctgcagcacctggacttcctc
ttcaagctcagagagatggaggccgccatcaccacggccgggctgtggttcagtggggag
ggcgaacagagactggagctccgccactcggccgatgacacgccgatggccgcggaggac
gccgcgcggcgctttgacgagttcctcgctgagtcgaaggacaaacatcagcgcgccctg
agcctggcggcggaggccaaggcgctcgttgccgcgggcgacgccggtcctgctgcggat
gttttccgtactctggtcgacacgttcaaatccaacgtggacgacttcacgctgcgggcc
gaacgaaggcgccgagagctggagacagagcgcgtgcagcgcttctctgaacaggcgtgt
gccctggcccaggaatgccgtggtttcttgcagcaggtcgagtcggggtgtgatccggct
cagaccctgagaacgctccacatgtacgaggagaggttagggggcgaattctccaccctg
cacttccaggccctgaaagacaaggcctgcgccggggccccgggggcctcgggggcctcg
ggagccccgggggcctgggggccgatgggagtctggaatgcggcccggatccagtgccaa
gaagtcgggcagcgtctcaaagagctgcagcagaaagagaaaggaggagatgagaagcag
aaccagccgaacacagctgcaaagcctcaaggggaagtaggaatggggaaggaggagaaa
gggagggaggcgggggaggcgggggaggcgggggagggcggtcgctccctgacccagccg
ccgacctttcagaaagaggtagtccatgtgtcggagggcgaaggagaaaccaccgccgtg
gcgtgcgtcggccatcacgatgaacccgactcgaaaggagaaaacggagagcgggaatca
gccgaggttcaaaccgagaacgtcgagcgagaagaattcccaaaacacgtcgaccgtcct
ccagaaaccaggcgccgcagcgaggccgacctgaggagcgcggcggcggtggaagggggc
gtcggcttccctttgcaccgacttcgaggccgctccctgagcgagggctccagcctccgc
cggcgcctgacgagcgtctccggcttctcgccgctgaacgtgagacacaaacactgtggg
agcgacacgccggaacagaacctgcagaacgtccaacaaaacctgagagacgaggaggag
ggcggaggatacgcaaacgtcacccagagccctcgaggtctgaggaccccagagacgttc
ctcacagccagagaactcacaggaggcaacgtgctgaaggtgcgcctgatcatggaggag
ctgctgtccacggagagggagtacgtgaaggccctgggttacgtccgagagcactacctc
tccgagctggagaggcccaacgtccctcagggcctccggggccagagggcgagcgtcttc
ggcaacttggagaaactccacgacttccaccgccatcacttccttcacgagttggagcgc
tgcgcggacgaacccttcagggtcggccgctgtttcttacgacacagggagagcttcgct
ttgtacgccctttacagcaagaacaagcctcagtccgacggcctgctcacggaccacgga
caggccttcttcaagcacaagcagctgcagctgggcgacaagatggacctgcggtcctac
ctgctgaagcccgtgcagcgcatcagcaagtacagcctgctgctgcaggacctgagggcg
gagtgcggcgcggggcgaccccgagagacggccgaggtcaaggccgccctggaggtcgtc
cacttccaactgcaccacggcaacaacctgctggccatggacgccatccaccactgtgac
gtgaacctgaaggagcagggccagctgatacgccaggatgagttcacggtcaccttcagg
aagaggaaatgtctgcgccacgtgttcctcttccaggagctcatcctcttcagcaaaacc
aggaagacggacgtggggaacgaaacgtacatctacaagcagtccttcaagacttcggat
gtgggcatgacccagaacagcggcgacagcgggctggtcttcgagatctggttccggaag
aggaagacccaggacacgtaccggctgcaggcggcgggccgggaggcgaaggatgcctgg
accagagacctggagcggatcctgtgggagcaggcggtccacaaccgggaggtccgtatg
caggagcgagagttcatggggatcggaaacaagccgttcatggacatccagcccagcgac
gcagccatcagcgaccgagccgtcagctacccgatgctggggagagagaaccgggcgctg
ccctcgacggactcgagcgattcacgggacgggctccccggggggcggccccgatctgtg
ggttcgggatgcagctcgtcttcctcgggaagaggctctctggtgggatatgtgcgtggg
cccaggtggaggggggccggaggggggggcctcggaggatacgggtgccctcctggagct
ctggaagaggacgacctggaccacgagagtgggatccacaacttattgttggacagctcc
gagtcgtcgggggagagcgtgagcggcttcagcagctccggcctcagcttccactctgca
gccgggggggaggtggaggacgccagcttcaccgcgaaggaggccggaccccccgaaaga
accccgccggcggtcgcccccaagccaaagaccagaccgcaagaccgggcccgggatccg
ctgcgtggcgaggttcagaacactagtgttggaaaatccactgaggtttga
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