Pseudoliparis swirei (Mariana hadal snailfish): 130207789
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Entry
130207789 CDS
T09868
Symbol
aspn
Name
(RefSeq) asporin
KO
K08120
asporin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pswi00535
]
130207789 (aspn)
Proteoglycans [BR:
pswi00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
130207789 (aspn)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRRNT
LRR_14
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
130207789
NCBI-ProteinID:
XP_056292467
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Position
18:3708169..3716837
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AA seq
379 aa
AA seq
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MRVFLLLCLLALGNAKPYQSINVMDFMRNYDIMMADSSHEEDEDDEDDDNKVDDKDVNVK
EVDDDEDEDYDDNCPAGCQCSPRVVQCSDKGEISVPQKIPEDTVILDLQNNDITEIKEND
FKGLNKLYGLFLIHNKISKIHPKAFRNMDHLRLLYLSYNLLTEIPANLPPNVIELRFHEN
KIHRIQKDAFKGLMKLHVLELGANPLANSGIGLGAFNGLSTLYVGISEAKLTAVPKDLPT
SITELSLDYNKIAKVEIEDFIRYKNLKRLGLGFNQIKYVENGSFASIPNVRQINLDNNRL
KKVPPNLNSLRSLQVIYLHGNKISSVGVNDFCPIPPSGKKNLYTGISLFANPVKYWDIQP
ATFRCVTGRRGVQLGNFRK
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcttcctcctgctttgcctgctggcgctaggcaacgccaaaccctaccagtcg
atcaatgtcatggacttcatgagaaactatgacatcatgatggccgattcgagccacgag
gaagatgaagacgatgaggacgatgacaataaggtcgatgacaaagacgtcaatgtcaaa
gaagtcgatgatgatgaagatgaagattacgacgacaactgtccggccggctgtcaatgc
tcaccccgagtggtgcaatgctccgacaagggtgagatctctgttccccagaagattccc
gaagacaccgtgatactagacctccaaaacaacgacatcacggagatcaaggagaacgac
tttaaaggcctcaataagctttatggcctgtttctgatccacaacaagatctccaagatt
caccccaaggccttcagaaacatggaccacctccgcctgctgtacctctcctacaacctg
ctcaccgagatccccgccaacctgcctcccaacgtcatcgagctccgcttccacgaaaac
aagatccacaggatccagaaggatgccttcaaaggcctgatgaaactgcacgtgctggag
ctgggcgccaaccctctggccaacagtgggattggactgggagcttttaacggcttgtcg
accctgtatgtcggaatatcagaggccaaactaaccgccgtgccaaaagacctcccaacc
tccatcacagagctgagcctggactacaacaagatcgccaaggtggaaatagaagacttc
atcagatataaaaacctgaagaggctaggactcggctttaaccagatcaagtatgtagaa
aacggcagcttcgccagcatcccgaacgtccgtcagatcaacctggataacaaccgtctg
aaaaaggtcccaccgaacctcaactccctgcgctccctccaggtgatttatctccacggc
aacaaaatcagcagcgtgggagtcaacgacttctgccccatcccgcccagtgggaagaag
aacctgtacactggcatcagcctgttcgccaaccccgtgaagtactgggacatccagccg
gccaccttccgctgcgtgaccgggcggagaggcgtccagctcggaaacttcaggaagtag
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