Pseudoliparis swirei (Mariana hadal snailfish): 130207796
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Entry
130207796 CDS
T09868
Name
(RefSeq) receptor-type tyrosine-protein phosphatase gamma-like isoform X1
KO
K16667
receptor-type tyrosine-protein phosphatase gamma [EC:
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130207796
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130207796
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130207796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Carb_anhydrase
PTP-SAK
Tc-R-P
DSPc
fn3
PTP-NADK
Y_phosphatase3
PTPlike_phytase
Utp8_b_propeller
Motif
Other DBs
NCBI-GeneID:
130207796
NCBI-ProteinID:
XP_056292478
LinkDB
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Position
18:19252427..19725599
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AA seq
1432 aa
AA seq
DB search
MWRLLHSCCCCWWIFSLILPAFMFLRAECHPALTGSQAESQAPIQGLRKAMADGTRLRRA
VTEETYWAYSGIYGPDEGWASAYPECRERNQSPINIVDQDTKVSTEYQELTLEGFDTESS
NQTSMKNNGKTVAILLKDEYFVRGAGLPGRFKAEKVEFHWGPNNESEGSDHSINGHRYPV
EMQIYMYNSDDFDSLSAALREKRIIAAMAVFFQVGGKDNPAVDPIIHGLKGVVHHEKETV
LKPFVLKDLLPSALGSYYRYTGSLTTPPCSKVVEWIIFSRPVFISYKQLEAFYSIFTTEQ
QDHVKSVEYLRSNFRPIQSLDNRHVFKSAVKDAWLPDLTDSGSGPYGTEASRVCSSAPIK
MKVQHVNSSALMVRWARPAVIYHPPILHFLVSYSWTSHDDSYEETHLTDAKHKLEAVITP
VSPDLLYLFRVQSICMNDMRSDFSQSMLFRANTTRIFEGTRIVKTGMPTVSPASSADMAP
ISSGSSTWTSSGIPFSFVSMATGIGPSSSGSQATVASVVTSTLLAGLGFSGGVISSFPSS
VWPSRAPTPTHSRNTARQTTEPTKPAKDATTSASAVTTAKATSETGGEDKENSKGQGEDE
EREGEDKDEEEEEEKEKEEKKERKGSGGVGEAGRKDNSTAQNEPSSETPDATAKEKKQTE
PDPAHMSPLEDQLEVFTHNPLDINSTTSTEAVDEMAEFSVPKDPAATLRPGSGRDKKHWP
FSIHTDRPSTGTNLTHQTRSGTGAGLGRVEWLVPLVVVSALTFLCLILLLAVLVYWRRCF
QTAHFYVEDSNSPKVVPNETIPVIPIPDDMEAIPVKQLIKHISELYSNNQHGFSEEFEEV
QRCTADMKITSEHSNHPDNKHKNRYINIVAYDHSRVKLRPMPWKDSKHTDYINANYVDGY
NKPKAYIAAQGPLKSTFEDFWRMVWEQNTCVIVMITNLVEKGRRKCDQYWPTENSEEYGN
MVVTLKSTKVHACYTVRRFILRNTKVKKRGKGNPKARAMGERIVLQYHYTQWPDMGVPEY
TLPVLTFVRRSSASQMADMGPMLVHCSAGVGRTGTYIVADSMLQQIKDKSTVNVLGFLKH
IRTQRNYLVQTEEQYIFIHDALMEAILGNETEVPASQLHSYFDSITTPGNSGRTHLEKQF
KLVKQCNTRFMECFNAQKECNKEKNRNSFVVPSERARVGLAPLPGIKGTDYINASYVMGY
YRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPANHELAEDEFVYWPSREEAMNCEA
FTVTLISQDRLCLSNEEQISIHDFILEATQDDYVLEVRHFQCPKWPKPDAPISSTFELIN
VIKEEAATRDGPTIIHDELGAVSAGMLCALTTLSQQLESEGAADVYQVAKMINLMRPGVF
TDIDQYQYLYKALLSLVSTKENGSCFLTRDTNGTMVSMSDQSDQAESMESLV
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggctactgcattcgtgttgttgctgctggtggattttctcactcattctgcct
gccttcatgttcctccgggccgagtgtcatcctgcgctgacaggaagtcaagccgagtcc
caagcccctatccaaggccttcgcaaagccatggctgacgggacacgactccgcagagct
gtcaccgaggagacctactgggcctactcaggtatatatgggccggatgaaggctgggca
tcagcctacccagaatgcagagaaagaaaccagtcaccaatcaacattgtggaccaggat
accaaagtatccacagagtatcaggaactgacactggagggcttcgatacggaatcctca
aatcagacatcaatgaagaacaacggcaaaacagtggccatcttgttgaaggatgagtac
ttcgtacgaggagcaggtctaccagggaggtttaaggcagaaaaagtcgagtttcattgg
ggtccaaacaacgaatctgaaggctctgatcacagcattaacggccaccgttaccccgtg
gagatgcagatctacatgtacaattcagatgactttgacagcctcagtgcagctctgagg
gagaagaggatcatcgcagccatggccgtgttttttcaggtaggggggaaggacaatcct
gctgtggaccccataatacacggcctgaagggagtggtccaccatgaaaaagagactgtc
ctgaagccgtttgtgctgaaggacctgctgccgtctgcgctgggaagttactatcgctac
accggctctctgaccaccccgccctgcagtaaggtggtggagtggatcatcttcagcaga
cctgtctttatctcctacaaacagttggaggctttctactcgatcttcaccacggagcag
caggaccatgtgaagtcagtggagtatctgcgcagcaatttcaggcccatccagagcttg
gacaaccgccacgtcttcaagtcagcagtcaaagacgcctggctgcccgacttgactgac
agcggcagcgggccgtatggcacggaggcgtccagagtatgcagcagtgctcccatcaaa
atgaaggtgcagcatgtgaacagcagtgctctgatggtgcgctgggctcgtcctgcggta
atctaccacccacccatcctccatttcctagtgtcctacagctggacgagccacgatgac
agctacgaggagacgcacctcaccgacgccaaacacaaactggaggcagtcataactccc
gtctcccccgatttgctgtacctgtttcgagttcagtccatctgcatgaatgacatgcgc
agtgacttcagccagagcatgctcttcagagcaaacaccaccaggatctttgaggggacg
aggattgtgaaaactggaatgccaacagtgtctccagcctcctcagctgacatggctccc
atctcctctggctcatctacttggacctcctcaggtatccccttctccttcgtatccatg
gcgacaggaatcgggccttcctccagcggtagtcaagcaacggtggcgtctgtggtgacc
agcactttactggccggcctgggcttcagcggcggtgtcatctcgtctttccccagctct
gtttggccgagcagagcgccaacgccaacccatagccgcaacaccgcacgccagaccact
gaacccaccaagcccgccaaagacgccaccacttctgcctctgctgtcacgacagccaaa
gctaccagtgaaactgggggtgaggacaaagagaacagcaagggtcaaggggaggatgaa
gagagggaaggagaggataaagatgaagaggaggaagaagaaaaagaaaaagaggagaag
aaggagaggaagggatcaggaggtgtgggggaggcagggaggaaggacaacagtacagca
cagaatgaaccgtccagcgagacaccggatgcaactgcaaaagagaaaaaacagacagaa
ccggatccagctcacatgtcacctttagaagaccaactggaggtgtttacacacaatcca
cttgacatcaactcaactaccagcacagaggcagtggatgaaatggcagaattctcagtc
cccaaggacccagcagcgacactcagacccggctcaggaagggacaagaagcactggcct
ttctccatccacactgaccgtccaagtactgggaccaacctgacccaccagacaagatcc
ggtactggtgcgggactgggccgcgtggagtggctggtacctttggtggtggtttcagct
ctgacgttcctctgccttattctactgctggctgtgctcgtctactggaggcgctgtttc
cagactgcccacttctatgtggaagacagcaattcacccaaggtggtacccaatgagacg
atccctgtcatccccattccagatgacatggaggctattccagtcaagcagttaatcaaa
cacatctccgaactctactcaaataaccaacatggattctctgaggaatttgaggaggtt
caacggtgcactgccgatatgaagatcacatcagagcactccaaccaccctgacaacaag
cacaagaacagatacatcaacatagtggcctatgaccacagcagggtgaagcttaggcca
atgccttggaaggactccaaacacaccgactacatcaatgccaactatgtggacggttat
aataagcccaaagcttacatcgcagcccagggacctcttaagtccacctttgaggacttt
tggcggatggtgtgggagcaaaatacctgcgtcattgtcatgatcaccaacttggtggag
aaaggccggagaaagtgtgaccagtactggccaacagagaacagtgaagagtacgggaac
atggtagtcacactgaaaagcactaaagttcatgcctgctacaccgttcgccgcttcata
ttacgcaacactaaagtcaaaaagcgggggaaggggaacccaaaagcacgtgccatgggt
gaacgtattgtgctacagtatcattacacccagtggcccgacatgggtgtccctgagtac
accctgcccgtcctcacgtttgtccgcaggtcctcggcctcccagatggctgacatggga
cccatgcttgtccactgcagtgctggagtgggtcggacagggacgtacatcgtcgcagac
agcatgctgcagcaaatcaaagacaagagtacagttaatgtactcggcttcctcaaacac
atacgcacccagcgcaactacctagtccagaccgaggagcagtacatctttatccacgat
gccttgatggaagccattttggggaatgagacagaagtgccagccagccagcttcacagc
tactttgacagcatcacgacaccaggaaacagcggacggacacatctggagaaacagttc
aagctggtaaaacagtgtaataccagattcatggaatgcttcaacgctcagaaggagtgc
aacaaagaaaaaaatcgaaactcctttgtggtgccatcggagcgagcgagggtcggccta
gcacctttgcccggcatcaaaggcaccgattacattaacgcctcttacgtcatgggttac
tatcggagtaatgagttcatcataacccagcatcctctgccccacaccacaaaagacttc
tggagaatgatctgggaccacaatgcacaaattattgttatgctgcctgccaaccatgaa
ctggcagaggatgagtttgtgtactggcccagtcgggaggaggccatgaactgcgaggcg
ttcactgtcaccctcattagtcaagaccgactttgtctgtccaatgaggagcagatcagc
attcacgacttcatcctggaagctacacaggatgactacgttttagaggtgcgtcacttt
cagtgtcccaagtggccgaaacctgacgcgcccatcagcagcaccttcgagcttatcaac
gtcattaaagaggaggccgccacccgcgatggaccaaccatcatccacgatgagttggga
gcagtatcggccggcatgctgtgtgccctcaccacattgtctcagcagctggagagtgag
ggcgccgccgacgtctatcaagtggccaagatgatcaacctcatgaggccaggagtcttc
acagacattgaccagtaccagtacctctacaaagctctgctcagcctcgtcagcaccaag
gagaacggctcttgttttctgaccagggatactaatgggaccatggtgtccatgtctgac
cagtctgaccaggcagagagcatggagtcactggtgtga
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integrated database retrieval system
