Pseudoliparis swirei (Mariana hadal snailfish): 130207855
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Entry
130207855 CDS
T09868
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130207855 (chd5)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130207855 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
PHD-1st_NSD
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
130207855
NCBI-ProteinID:
XP_056292558
LinkDB
All DBs
Position
18:4304361..4348084
Genome browser
AA seq
2033 aa
AA seq
DB search
MHRFGSVCVASPESAALGGLNAAGDQRRVALVPASAKKAEDMLGVPQRSSGEFPFTPSLC
ALADEDDEGERNTVPLAPLGGFFSENDSLKPQPKKKKPKKMKEGKMPKVKKRKKEGEIQP
RVDSDPEEASEVEEEEEGERQRPEVGSESEGSAYGPTKKKKKKPKEKKPRKKKRDEEEEE
DDDDDGNMKEPKSSGHLMTEWGLEDVQYGFTEEDYKTITNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVTQPLAVVSGGSEPPCSQP
GPIKKAKTKEGKGPGVRKRSKTAKEGKKKAKPKKTKSKSGQSVKKKKASSSEEDFLEESD
FDDISVHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETDHQDYCEVCQQGGEIILCD
TCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEEEEEPVGEEEDDHLEFCR
VCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQKILHWMWGEP
PLPAEPPDGEPADPLADPPADPLADPPLKGRPEREFFVKWAALSYWHCSWVSELQLELYH
TVMYRNYQRKNEMDEPPPFDYGSGEEELNNEKRKSKDPQYAAMEGRFYRYGIKLEWMVMH
RIINHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPDYDSLKAMYWDHREQIVGEDHRP
LVVRRGNKLKEDYPKREVPPDAPIIDPTIKFEHQPWYVNATGGTLHPYQLEGLNWLRFSW
AQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFELWAPDF
HVVTYTGDKDSRAVIRENEFSCEDSAVKSGRKVFRMKKDTPIKFHVLLTSYEQITIDQAV
LGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTA
ARFNNLEGFLEEFADISKEDQIKKLHDLLGSHMLRRLKVDVFKDMPSKTELIVRVELSPM
QKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAALEAPVLPNGSYD
GNQLAKSSGKLTLLQKMLKQLKDDGHRVLIFSQMTKMLDLLEDFMEFEGYKYERIDGGIT
GALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVVIYDSDWNPHNDIQAFSRAH
RIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKF
GTEELFKGEMEAAARAMGHPGDSKEGEEGNVIHYDDDAISKLLDRNRDASEDTEIQNMNE
YLSSFKVAQFVVKEEEGEEEVEREIIKQEENVDPDFWEKLLRHHYEQQQEDLARNLGKGK
RVRKQVNYNDTTQEDQDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQMKNEKDKPLPPLL
ARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEREFRAYVSLFM
RHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKLSSPDLIPI
GMELKKLTESLSSDPNTPVPSSPVVTQPGTPVTPEKTESLFGTTEDKESAEQDGKKPSEQ
DSSGAEQPASDGEESKPSAERDRAEAEPSANSKESALKLTEQSSSHTSPKTDACKETESS
SEKGDAESPLAKMDDKENKPDELKSEDASEGRLNGDKDALDEPDDGRKEDKNGYKTKFMF
NIADGGFTELHTLWQTEERAALTSGKMHDIWHRRHDYWLLAAIVTHGYARWQDIQNDLRY
AILNEPFKTEILKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSQPAMAL
NTRFSEVECLAESHQHLSKESLGGNKPANAVLHKVLNQLEELLSDMKADVTRLPNMLARI
PPVSGRLQMSERSILNRLTSRGSEPPPQQPFGQAAFGCSQMYSSGFAGGFRGPGGQPIIN
YSQMPLGPYVSVSSNGPPPPTSHLDKRSHDSLRDVATPDLKSGKPSDVICIED
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtttcgggagcgtctgcgtggcgtcgccggagtcggctgcgctcggcggtctg
aacgcagccggcgaccagcggcgggtcgctttagtcccagcgagcgcgaaaaaggcagaa
gacatgctcggtgtacctcagcggtcctccggggagttcccgtttactccatctctttgt
gctctggcggatgaggacgacgaaggcgagcgcaacaccgttcccctcgcgcccctcggc
ggcttcttctccgaaaacgactccctcaaaccacaaccgaagaagaagaagcccaaaaag
atgaaagaggggaaaatgcccaaagtaaagaagaggaaaaaggagggggaaatccagccg
cgggtcgacagcgacccggaggaggcctccgaggtggaggaggaggaggagggggagcgg
cagcgtccggaggtcggctctgagagcgagggcagcgcctacggccccaccaagaagaag
aagaagaagcccaaggagaagaagcccaggaagaagaagagagacgaggaagaggaggag
gacgacgacgatgacgggaacatgaaagaacccaaatcatccggccacctgatgaccgag
tggggcctggaagacgttcagtacggcttcaccgaggaagactacaagaccatcaccaac
tacaaggccttcagccagttcctcaggcctctcatcgccaagaagaaccccaagatcccc
atgtccaagatgatgacggtgttgggggccaagtggcgagagttcagcgccaacaacccg
ttcaagggcgcgtccgccaccgccgtggccgccgccgtggccgccgccgtggagacggtt
accgtgacgcagccgctggccgtcgtgagcggcggcagcgagccgccgtgctctcagccg
gggccgatcaaaaaggccaaaaccaaagagggaaagggaccgggagtcaggaagagaagc
aagacggcgaaggaggggaagaagaaagccaagccgaagaagaccaaatcaaagtcgggc
cagagtgtgaagaagaagaaagcttcctcgagtgaggaggacttcctggaggagtcagac
ttcgatgacatcagcgtccacagcgcctctgtgctctccgacacctcgggggccgccacc
aagaagaaggcccgacgtgggcgtaaaaaaaggaaaaaggaagacggcgacggctacgag
acggaccaccaggactactgcgaggtctgccagcaggggggcgagatcatcctgtgtgac
acgtgtccccgagcgtaccacctggtgtgcctggacccggagctggagaaagcccccgag
ggcaaatggagctgtccacactgcgagaaagaggggatccagtgggaggctaaggacgag
gaggaggaagaggaggagccggtaggcgaggaagaggacgaccacctggagttctgcagg
gtgtgtaaagatggaggggagctgctgtgctgcgacacctgcccgtcctcctaccacatc
cactgcctcaacccgcctctgcccgagatccccaacggggagtggctgtgtccgcgctgc
atgtgtcctcccctcaaaggtaaggtccaaaagattctgcactggatgtggggggaaccc
ccgctgccggcggaaccgcccgacggcgagccggccgacccgctggccgacccgccggcc
gacccgctggccgaccctccgctcaagggccgcccggagagggagttcttcgtgaagtgg
gcggccctctcgtactggcactgctcctgggtcagcgagctgcagctggagctgtaccac
acggtcatgtaccggaactaccagcgcaagaacgaaatggacgagccgccgccgttcgac
tacggctccggagaagaggagctcaacaacgagaagaggaagagcaaagacccccagtac
gccgcgatggagggccgcttctaccgctacggcatcaagctggagtggatggtcatgcac
cggataatcaaccacagttttgataaggacggcgatgtgcattacctgatcaagtggagg
gacctgccctacgaccagtgcacctgggaggtggacgacttcgacgtccccgattacgac
agtctcaaggccatgtactgggaccacagggagcaaatagtaggggaggaccaccgcccc
ctggtggtgaggagaggaaataaactcaaagaggactacccaaagagggaggtccctcct
gatgctcccatcatagatccgaccatcaagtttgagcaccagccgtggtacgtcaacgcc
acggggggaaccctgcacccgtaccagctggaaggcctgaactggttgaggttctcctgg
gctcagggcacagacaccatcctggccgacgagatgggcctcggcaagacggtgcagacc
atcgtgtttctctactcgctctataaggagggtcactcgaaggggccctacttggtgagc
gcgcccctctccaccatcatcaattgggagagggaattcgagttgtgggctccggatttc
cacgtggtgacgtacaccggagacaaagacagccgggccgtcatcagggagaacgagttc
agctgcgaggacagcgccgtgaaatcgggacgcaaggtgttccgcatgaagaaagacacg
cccatcaagttccacgtgctgctgacgtcctacgagcagatcacgatcgaccaggccgtg
ctgggctccatcacgtgggcctgcctggtggtggacgaggcccaccggctgaagaacaac
cagtccaagttcttcagaatcctcaacgggtacaagatctactacaagctgctgctcacc
gggactcctctccagaacaacctggaggagctgttccacctgcttaacttcctcaccgcg
gcacgcttcaataacctcgaaggctttctggaggagttcgccgacatctcgaaggaggac
cagatcaagaagctccacgacctgctcggctctcacatgctgcggaggctcaaagtggac
gtctttaaggacatgccttccaagacagagctgatcgtcagagtggagctcagccccatg
cagaagaaatattacaaattcattttgacgcggaatttcgaggcgctgaactccaaaggc
ggcgggaaccaggtgtccctgctcaacatcatgatggacctgaagaagtgctgcaaccac
ccttacctgttcccggtggccgctctggaagctcccgtgttacccaacggctcgtatgat
ggaaaccagctggcgaagtcctcaggaaaactgacgctgcttcaaaaaatgctgaagcag
ctcaaagatgatggacacagagttctcattttctctcagatgacaaagatgttggatctg
cttgaagatttcatggagttcgagggttataaatatgaacgtattgatggagggattacc
ggagccctcaggcaggaggccattgaccgcttcaatgcaccgggcgctcagcagttctgc
ttcttgctgtcgacgcgggccggaggtctcggcatcaacctggcgagcgccgacaccgtc
gtcatctacgactccgactggaatcctcacaacgacatccaagcttttagcagagcccac
cgtatcggccaaaacaggaaggtgatgatctaccgcttcgtgacacgaggctcggtggag
gagcggatcacccaggtggcgaagaggaagatgatgctcacccacctggtggtgcggccc
ggcctcggctccaaaaccggctccatgtccaaacaagaactggacgacatcctcaagttc
ggcaccgaggagctcttcaaaggcgagatggaggcagcggcgcgagccatgggtcatcca
ggtgacagcaaagagggggaggagggaaacgtgattcactacgacgacgacgccatctcc
aagctgctggaccgcaaccgggacgccagcgaggacacggagatccagaacatgaacgag
tacctgagctcctttaaggtggctcagttcgtggtgaaggaggaggaaggagaggaggag
gtggagcgggagatcatcaagcaggaggagaacgtggacccggacttctgggagaagctc
ctgcggcaccactacgagcagcagcaggaggacctggcccgcaacctcggcaaaggcaaa
cgcgtccggaagcaggtcaactacaacgacacgacccaggaggaccaagacaatcagtcg
gagtactctgtggggtccgaggacgaggacgaagatttcgaggagaggcctgaaggtgga
cgcagacagtcgcgtcggcagatgaagaatgagaaagacaaacctctgcctcccttactg
gcccgggtcgggggcagcattgaggtcctggggttcaacgcccgccagaggaaagccttc
ctcaatgccatcatgcgctgggggatgccccctcaggatgccttcaactcccattggctg
gttcgagacctgagagggaagagtgagcgcgagttcagggcctacgtgtctctgttcatg
agacatctatgtgagccgggggcagacggagccgagaccttcgccgacggagtcccacgt
gaggggctgtcccgacagcatgttctcaccaggatcggcgtcatgtccctcgtcaggaag
aaggtgcaagagtttgagcatgttaacggcaagctgagttccccggatctgattcccatc
ggcatggagctgaagaagctgaccgagagcttgtcttctgaccccaacaccccggtgccc
tccagccccgtcgtcacacagccgggcacgcccgtcacgccagagaagaccgagtctctc
ttcggtaccactgaagacaaggagagcgcagagcaagacggcaagaagccgtcagagcag
gactcgtccggcgcggagcagccggcgtccgacggcgaggagagcaaaccgtcagccgag
agggaccgagccgaggccgagccgtcggccaactccaaggagtccgctctgaaactgacg
gagcaatcatccagtcacacctccccgaaaacggacgcctgcaaggaaacagagagttcc
tcagaaaaaggagatgctgagtctcctctggcgaaaatggacgacaaggagaataagcca
gatgagttgaagagcgaagacgcgtcggagggccgattgaacggagacaaggatgctttg
gacgagccggacgacggcaggaaggaggacaagaacggctacaaaaccaagttcatgttt
aatatcgccgacggaggcttcacggagttgcacaccctctggcaaaccgaggagcgagcg
gcgctgacgtctggaaagatgcacgacatctggcaccgtcgccacgactactggctccta
gccgccatcgtaacacacggctacgctcgttggcaagacatccagaacgacctgcgctac
gccatcctgaacgagcccttcaagaccgagatactaaagggaaactacctggagatgaag
aacaagttcctggctcggcgcttcaagttgttggagcaggctctggtgattgaggagcag
ctgaggcgggcggcctacctgaacatgacgcaggatcccagccaaccggccatggctctc
aacactcgcttctccgaggtggaatgtctggccgagtcccaccagcacctgtccaaagag
tcgctgggcgggaacaaacccgccaacgccgtgctgcacaaagtgctgaaccagctggag
gagctcctgagtgacatgaaggccgacgtgacccgtctccccaacatgctcgcccgcatc
ccgcccgtgtcgggccgcctgcagatgtcggagcggagcatcctgaaccggctcaccagc
cggggcagcgagccgccgccgcagcagcctttcggccaggcggcgttcggctgctcccag
atgtacagcagcggcttcgccggaggattcagaggaccgggggggcagcccatcatcaac
tacagccagatgcctctggggccctacgtcagcgtgtcctccaatggccctccgcccccc
acaagccatctggacaagaggtcacatgactccttgagagacgtggctacgcccgacctc
aaatcaggcaaacctagtgatgtcatctgtattgaggactag
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integrated database retrieval system
