Pseudoliparis swirei (Mariana hadal snailfish): 130207937
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Entry
130207937 CDS
T09868
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130207937
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
130207937
NCBI-ProteinID:
XP_056292695
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Position
18:27466358..27550057
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AA seq
1329 aa
AA seq
DB search
MSNPALKKNHWTFRVSECSVSRGARGGDAYVPLRGGAENGEFAYIGRVDEEVAVGNLNEG
ELLLEVENLSISGLPLYDVQTVIRNCRGPVKLKTVRQGSKLNKDLKHYLSQRFQKSSPDH
ELQQTIRDNLYRHAVPCTTRAPRDGEVPGVDYNFLSVEDFLKLEQSGTLLEIGTYDGNYY
GTPKPPVQPPPPSGTVIPSSGRRGDAPRADGLSLPDSQNSTPRRGTFYNDMRHAGIGPAE
QQEDDEDLPDMNSSFTGDSSEVDETPHSVHPYGPPPARKSDPPYVGRTPSPSATTESTEQ
SHPYLSHPPPEDPLGTLPDNWEMAFTENGEVYFIDHNTKTTSWIDPRCLEKPQKPLEECE
DDEGVHTEELDNDLELPQGWEKIDDPVYGVYYVDHFNRKTQYENPMLEAKRRRQPEPPGQ
QQPPEEWIEDSPLAGAPLASYAANHQETYRDPQRGPPMPNAMGQKRGKPFFTRNRSELNG
TFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVL
GYTHAQVVKIFQSIPIGSMVNLELCRGYPLPFDPDDPNTSMVTSVAITDNKDPIIVNGQA
AAGSYGSPSGGHSGGAPLNGLPRAYSPSAEPDGDSASSSQHGGYPSDVVTLASSIATQPE
LITVHMEKGDKGFGFTIADSPGGGGQRVKQIVDYPRCRGLKEADIIVEVNKRNVQSMSHN
QVVDMLSKCPKGSEVTMLVQRGVVPAKKSPKLDGFERAPPYGDYSRRQLSRKDSQNSSQH
SVSSHRSNHADSPLHPSLAPPLSESAAPPPPAPSQPLPGLPPQDSPAADGTIQRKPDPFK
IWAQSRSMYESRLPDFQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKFGAADEDGR
LRSGDELISVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKATYAVKAEGDVPPSPAS
SHHSSTQAPSLTEEMGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGGGGGGGGAGASGN
AASAIVAASAAAVVSSSQPPGAPPGAPPPPASSSASFNPYDVEIRRGESEGFGFVIVSSV
SRPEAGTTFAGNACVAMPHKIGRIIEGSPADRCGRLKVGDRILAVNGVSITNKSHSDIVN
LIKEAGNTVTLRIVPGDESSNASLLTNAEKIATITTTHTTQQQQAAPEARNNTKPKQESY
EFKAPPGPPPQPPTQVSAQDSEFYSVDLDRDNKGFGFSLRGGREYNMDLYVLRLAEEGAA
VRNGKMRVGDEILEINGESTKGMKHARAIELIKSGGRRVRLVLKRGDGSVPEYGGSIYEN
IPFSPIFTP
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccccgcgctgaagaagaaccactggaccttcagggtcagcgagtgctccgtg
tccagaggcgcccgcggcggagacgcgtacgtgccgctgcgcggcggcgcggagaacggg
gagttcgcctacatcgggcgcgttgacgaggaggtcgcggtggggaatttaaacgaggga
gagctgctgctggaggtggagaatctctccatctcgggattaccgttgtacgacgtgcag
accgtgatcaggaactgcagaggtcccgtcaagttgaagactgtcaggcaagggagcaag
ctgaacaaggacctgaagcattacctgagccagcgcttccagaagtcgtcgcccgaccac
gagctgcagcagaccatccgggacaacctgtaccgccacgccgtgccttgtacgacccgt
gcccctcgtgacggagaagttcccggcgtggactacaacttcctctcggtggaggacttc
ctgaagttggagcagagcggcacgctgctggagatcggaacgtatgacggaaactattat
gggacgcccaagcccccggtgcagccccccccccccagcgggacagtgattcccagcagc
ggtcgccgcggtgatgccccacgggccgacgggctcagcctgccggactcgcagaactcc
actccccgacgcggcaccttctacaatgacatgcgccatgctggaataggacccgccgag
cagcaggaggacgacgaggacctcccggacatgaacagcagctttacaggagattctagt
gaagtagacgagaccccccactcggtgcacccctacggccccccccccgcgcgcaagagc
gacccgccctacgtcggcaggaccccctcgccgtcggccaccacggagagcacggagcag
tcgcacccttacctgagccatcctcccccggaggatcctctgggaactctgcccgacaac
tgggagatggccttcaccgagaacggagaggtctacttcatcgaccacaacacaaagacc
acctcctggatcgacccccggtgcctggagaagcctcagaagcccctggaagaatgtgaa
gacgacgaaggggtccacacggaggagctggacaacgacctcgaacttcctcaaggatgg
gagaagatcgacgatccggtgtacggggtctactacgtggatcacttcaacaggaagacc
cagtatgagaaccccatgctggaggccaagcggcgccggcagccggagcctccgggccag
cagcagccacccgaagagtggatcgaggactcgccgctcgcgggggcgccgctggcgagc
tacgctgccaaccaccaggagacgtaccgggacccccagagaggacccccgatgcccaac
gccatggggcagaaacgagggaagccgttcttcacccggaaccggtccgagctcaacggg
accttcatcaacaccaagctgaagaagagccgccgggggttcggcttcacggtcgttggc
ggcgacgagccggacgagttcctgcagatcaagagcctggtgctggacgggccggcggcg
ctggacggcaagatggagaccggcgacgtgatcgtgagcgtcaacgacacgtgcgtgctg
ggctacacgcacgcccaggtggtgaagatcttccagtccatccccatcggctccatggtc
aacctggagctgtgccgcggctacccgctgcccttcgaccccgacgaccccaacaccagc
atggtcacctcggtggccatcacggacaacaaggacccgatcatcgtcaacggccaggcg
gcggccggcagctacggctcgccgtccggcggccacagcggcggggcgccgctcaacggc
ctcccgcgggcctacagcccgtcggcggagccggacggcgactccgcctcctcctcccag
cacggcggctaccccagcgacgtggtcacgctggcgtcctccatcgccacgcagcccgag
ctcatcaccgtgcacatggagaagggcgacaagggcttcggcttcaccatcgccgacagc
cccggcggcggcgggcagcgcgtgaagcagatcgtggattacccgcgctgccgcggcctc
aaggaggccgacatcatcgtggaggtcaacaagaggaacgtgcagagcatgtcgcacaac
caggtggtcgacatgctcagcaagtgccccaaaggcagcgaggtcaccatgctggtgcag
agaggagtggtccctgcaaagaagagcccgaaactggatggttttgaacgagctccaccg
tacggagattacagcaggaggcagctgtcgaggaaggacagccagaacagctcccagcac
agcgtctccagccaccggagcaaccacgccgactcgcccttgcacccgtccctggctccg
cccctcagcgagagcgccgcccctcccccgccggcgccctcccagccgctgcccggcctg
cccccccaggactccccggcggcggacggcaccatccaaagaaaaccggacccctttaag
atctgggcccagtccaggagcatgtatgaaagtaggcttccagacttccaagagcaggac
atcttcctgtggaggaaggacacgggcttcggcttcaggatcctgggcgggaacgagccc
ggagagccgatctacatcggccacatcgtgaagttcggcgcggcggacgaggacggccgc
ctgcgctccggcgacgagctgatcagcgtggacggcacggcggtggtgggcaagtcgcac
cagctggtggtgcagctgatgcagcaggcggccaagcagggccacgtcaacctgacggtg
cgccgcaaggccacctacgccgtgaaagccgagggcgacgtgcccccgtcgccggcctcc
tcccaccacagcagcacccaggcgcccagcctgacggaggagatggggaagcgcacgccg
cagggcagccagaactccctcaacaccgtcagctccggcagcggctccacctccggcatc
ggcagcggcgggggagggggaggaggaggaggaggaggaggggcgggcgccagcgggaac
gccgcctcggcgatcgtcgccgcctcagccgccgccgtcgtctcctcctctcagcccccc
ggcgccccgcccggcgccccgcccccccccgcctcctcctccgcctccttcaacccctac
gacgtggagatccgccgcggcgagagcgaagggttcggcttcgtcatcgtgtcgtcggtg
tcgcggcccgaagccggcaccaccttcgctggcaatgcatgtgtggccatgccccacaaa
atagggcgcatcatcgagggcagcccggcggaccgctgcgggaggctgaaggtgggcgac
cgcatcctggccgtcaacggcgtctccatcaccaacaagtcgcactccgacatcgtgaac
ctcatcaaggaggccggcaacaccgtcacgctgcgcatcgtccccggagacgagtcatcg
aatgcgtctctgttgaccaacgcggagaagatcgccaccatcaccaccacccacacgact
cagcagcagcaggccgcgcccgaggccaggaacaacaccaaaccaaaacaggagtcgtat
gaattcaaagcgccgccgggcccgccccctcaacccccgacacaagtctccgctcaggac
tctgagttctactccgtggacctggaccgggacaacaaaggcttcggcttcagcctgcgc
ggcggccgcgagtacaacatggacctgtacgtgctgcggctcgccgaggagggggcggcg
gtccgcaacgggaagatgagggtcggcgacgagatcctggagatcaacggcgagagcacg
aagggcatgaagcacgcccgcgccatcgagctcatcaagagcggcggccgccgcgtccgc
ctggtgctgaagaggggcgacggctcggtgccggaatatggtgggtcaatctacgaaaac
atccccttctcccccatcttcacgccctga
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