Pseudoliparis swirei (Mariana hadal snailfish): 130207944
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Entry
130207944 CDS
T09868
Symbol
brpf3a
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130207944 (brpf3a)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
130207944 (brpf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
FYVE_2
C1_1
Motif
Other DBs
NCBI-GeneID:
130207944
NCBI-ProteinID:
XP_056292709
LinkDB
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Position
18:complement(12589338..12599684)
Genome browser
AA seq
1201 aa
AA seq
DB search
MRKVRRWECETVARGLKMGRGRGRGRGRGRGSSGQLRPPSPYRLQLSPSRETLTYAQAQK
IVEVDLEGRLHRINITDALPVITEDEMMAQDIAECNSNKENSEQTQTKTRSWRKPTNSKS
RKTSKNTSHQNQRSGSQQHTGPTNSLQQPSHQIPLPEPIFRVLSSVCPSEAPPLPKAYYR
FIEKSMEEQDSVAEYDMDEEDLAWLEMVNQKRVCDGYASVSADTFELLIDRLERESILES
RSQALSQSAVDEDAFCCVCLDDECLNSNVILFCDICNLAVHQECYGVPYVPEGQWLCRCC
LQSPSRPVDCVLCPNRGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPVDGVKNIPPA
RWKLTCYLCKQKGRGASIQCHKANCYRAFHVTCAQKAGLFMKIDPVRETGVNGTTFSVKK
TAFCEHHSPVGSRRDESVEGRLVGGRGNRGQRSYTQSPPPPPPNKKATKGQKKKNTKGSG
RSTRRSTVPVLLVPQIPSHRLNKICTGVEVQRKNQFMQRLHNYWLLKRQSRNGMPLIRRL
HSHLQAQKTSEQREPDEKLSAAREELRYWQKLRQDLERARLLVELIRKRERLKREQMKIQ
QATLELKLTPALVLLRSTLEQLQEKDTSKIFSQPVNLSEVPDYLEFISQPMDFSTMCTKL
EGHAYCSITDLEKDFNLMISNCLKYNSKDTMFHKTALQLREVGGAVLRHAHRQSQSIGLD
PSTGMHLPESPNRHGFYNCTWDDVDSLLDPENRLHLTTDEQLKALLDKLDMVASMRTSGG
RTKRIRLLRREINSLKQKMNQQQQNSQSVNGNDEDGEGKEQEEKKQKKKKKKTNGTLTAM
SNPGTDDAPPVLELTCPVSSPLPGDAPLEPPVLGIVPGGRRSPGRSYKRQRSQQEAAHEV
TPLETPPTPVGVGRRTSVLFKKAKNGARVVKNKSPPRQNGNTSEGQTNGLASTPASPKSP
SATNITTLPPTPNASPAPPSPSSHHLRSRGLGSESEADKLPPPPREGGLTNGKHTSADHN
DNDQKLNCSVSPPKRSRGKPALAKVPDSEHGGLCGSGQSTLMSLDSEAELGPLDLVWAKC
RGYPSYPAMIVDPDMPQEGLLHNGIPIPVPPVDVLKLGEWRETEEGEKLFLVLFFDTKRT
WQWLPRNKLLPMGLDDTVDKLRLMEGKKPSVRKSVHTAYDRAMVHLNHVRGNLNFTPSNF
I
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaggtgaggaggtgggaatgtgagacagttgctcgtggactcaaaatgggtagg
ggccgaggccgagggagaggcaggggcaggggatcatctggccagttgcggcccccttcg
ccctacagactgcagctctctccatccagggagactttgacgtatgctcaggcacagaaa
atagtggaagtggacctagagggaaggcttcatcggattaacatcacggatgctctgcca
gttattaccgaggacgagatgatggcccaggacattgctgagtgcaacagcaacaaggag
aacagtgaacaaacgcagactaaaactagatcgtggaggaaacccacaaacagtaaaagc
aggaagactagtaaaaatacgtctcaccagaaccaacggtccggctcccagcagcacact
gggcctactaattctctccagcaaccgtcccaccaaatccctttgcctgagcccatcttc
cgtgtgctgagttcagtttgcccctcagaggcgcctcctctcccgaaagcctactatcgt
ttcatagaaaagtcaatggaggaacaggacagtgtggcagagtatgacatggacgaggag
gacctggcttggctggagatggtgaaccaaaagagggtgtgtgacggctacgcctccgtg
tctgcagacacctttgagctgctgatcgaccgcctggagagggaatccatcttggagtcc
cgcagccaggctctgtcccagagtgccgtggacgaggatgctttctgctgtgtctgtctg
gatgacgaatgtttgaacagtaatgtcatcctgttctgtgacatctgcaatctggccgtc
caccaggagtgttacggtgtgccctacgtacctgagggccagtggctgtgccgctgctgc
ctgcagtccccctcccgccctgtagactgtgtgctctgtcccaaccgaggaggtgccttc
aaacagacaagtgatggacgttgggcccacgttgtctgtgccatatggattccagaggtg
tgttttgccaacacagtgtttttggagcctgttgacggggtcaagaacatccctcctgct
cgctggaaactcacctgctacctgtgtaagcagaaaggcagaggagcatccattcagtgc
cacaaagccaactgctacagggcctttcatgtcacctgcgcccagaaggctggcctgttc
atgaagatagacccagtccgggagacgggtgtcaacggtaccaccttctctgtgaaaaag
actgctttctgtgagcatcattctccagtggggtctcggcgggacgagtcagttgaaggg
agactggtggggggccggggtaaccggggtcaaaggtcctacactcaaagccccccacca
ccaccaccaaacaagaaggccaccaagggccagaagaagaagaatacgaaggggtctggc
cggtcgacacgccgctcaactgtgcctgtgctgctcgtgcctcagattccctcacacagg
ctgaacaagatctgcaccggagttgaagtccagagaaagaatcagttcatgcagaggctt
cataactactggttactgaaacgtcagtcacgaaatgggatgcctttaatacgccgactt
cattcccatctacaggcccaaaagacttcagagcagagggaacctgatgagaagctgagc
gctgcaagagaggagctacgatactggcaaaagttgaggcaagacctggaaagagccagg
ctgttggtggaactcatccgcaagagagagcggctaaagagagaacagatgaaaattcag
caggctactctcgagttaaagttgacccctgcgttggttcttctgcgatccaccttggaa
caactgcaggagaaggacacatctaaaatcttctctcagccggtcaatctgtcagaggtc
ccagattacctggagtttatttcccaacccatggacttctccaccatgtgtaccaaactg
gagggacatgcctattgctccatcacggacctggagaaggactttaacctcatgatctcc
aactgcctcaagtacaactccaaggacaccatgtttcacaagacagccttacaactgcgg
gaggtgggtggagctgttctccgtcacgcccacaggcagtctcagagcatcggcctggac
cccagcactgggatgcatctcccagagtctccgaacaggcatggcttctacaactgtaca
tgggacgacgttgactctctgctggacccggagaacagactgcacttaaccacagatgaa
cagctgaaggccttactggacaaactggacatggttgcatccatgcgcaccagtggtggt
cgaaccaagcgcatcaggttgctgcgccgagagatcaactctctcaaacagaagatgaac
cagcagcagcaaaactcgcagtctgtgaacggcaatgacgaagacggcgaaggaaaagag
caggaagaaaagaagcagaagaaaaagaaaaaaaagacaaatgggactttgacagccatg
tcaaaccctgggacagatgacgctccgcctgtgctggagctcacctgcccggtatcgtcc
ccgctgccaggagacgctcctctcgaacctcctgtcctgggcatcgtacctggggggcga
cggtctcctggacgctcctacaagcggcagaggtcacagcaggaggcagctcatgaggtt
actccgctggagacacccccgactccggttggagttggtcgtcgcacgtctgttctgttt
aaaaaagcaaagaatggggcgcgagtggtcaaaaacaagtctccaccacgacagaatggt
aacacgtctgagggtcaaactaacgggctggccagcacacctgccagcccaaagtcaccc
agtgcgaccaacatcaccaccttacctcccactccaaacgcctcccctgcacctccctct
ccgtcctctcaccacctgaggtccagaggcctcggctcagaaagtgaagcagacaaactc
cctccaccccccagagaaggaggcctgacgaatggaaagcacacctctgcagaccacaat
gacaacgaccaaaaactaaactgcagtgtctcgccacccaaaagaagtcgtggtaaacct
gcgttggcgaaggttcctgacagtgagcacggaggcctctgtgggtctggacagtctaca
cttatgtctttagatagtgaggctgagctcggacctctggacctagtttgggccaaatgc
agaggatacccatcgtacccagcaatgattgttgatccagatatgccccaggaagggctc
cttcacaacggcatccccattccagtgcctcccgtggatgtgctcaaactgggcgaatgg
agggaaacggaagaaggggaaaagctcttcttggtgcttttctttgacaccaaaagaacg
tggcaatggctccctcgcaacaaattactgccgatggggctggacgacacggtggacaag
ctgcgcttaatggaaggcaagaaacccagcgttcgcaagtccgtacacactgcatacgac
cgggccatggtgcatttgaatcatgtcagaggaaatctaaacttcacgccctccaatttt
atataa
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