Pseudoliparis swirei (Mariana hadal snailfish): 130208128
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Entry
130208128 CDS
T09868
Symbol
usp49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pswi01002
]
130208128 (usp49)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130208128 (usp49)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130208128 (usp49)
Peptidases and inhibitors [BR:
pswi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130208128 (usp49)
Ubiquitin system [BR:
pswi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130208128 (usp49)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
130208128
NCBI-ProteinID:
XP_056293065
LinkDB
All DBs
Position
18:15197249..15203763
Genome browser
AA seq
676 aa
AA seq
DB search
MDRCKHVGRLRLGHDHSILNPQKWHCVDCSTTDSVWACLKCSHVACGRFMEEHSLKHFQE
SQHPLAMEVRELDVFCFACGDYVLNDNAEGDLKLLRGALSTVRSPGRRSLRSSTGGECTS
RVGEGGPQPAMQLALRHRRKALLGKMLRTWIGKHQELQNHREDKLEEARRQKKEVKRRLM
EELGNVPPRKSARLLTQAPRSTITLIPLKFRDPPERLPPPPKKPSLLTPSRKAPQNGRAA
KLRRYYSTHAVTRRRLAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETEEL
LAKANNSQEMTGVTGGVVSSGNAALSGGPLGRMGKPDSLILAPGKESAPPSPQASELVQP
KEPRCSTRQQMSLCHELHTLFRVMWSGRWSLVSPFAMLHSVWNLIPAFRGYDQQDAQEFL
CELLDKVQQELDTEGSKRRIVIPITKRKLSKQVLKVLNTIFHGRLLSQVTCLSCKHKSNT
VEPFWDLSLEFPERYHSIDKGSGSAAYQRSCTLTEMLSKFTEMEALEGSIYACNHCNKRR
RKSSHKPIVLSEARKQLLIYRLPQVLRLHLKRFRWSGRNHREKICVHVAFEQVLNIKPYC
CSGSGHSVHRGGYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMKVCSVEE
VCNTQAYILFYTQRSA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttgtaagcacgtgggacgccttcgcctgggccatgaccattccatcctcaat
ccacaaaaatggcactgtgtggactgcagcaccaccgattcagtgtgggcctgcctcaag
tgctcccacgtggcctgtggacgtttcatggaggagcactcactcaaacactttcaggag
tcacagcacccactggctatggaggtgcgtgagctggatgtgttctgttttgcctgtgga
gactatgtcctgaatgataatgcagagggagacctcaaactcctcagaggggccctctct
acggttcgcagcccaggtcgacgctcactgcgctcctcaactgggggagagtgcacctct
agggttggcgaaggtgggccacagcctgccatgcagttggcgttgcgtcataggaggaaa
gcacttctcgggaagatgcttcggacgtggatcggtaaacatcaagagctgcagaatcat
cgtgaagacaaacttgaggaagctagaagacaaaaaaaagaggttaaaaggagactcatg
gaagagcttggcaatgtccctcccagaaagagcgctaggcttcttactcaggcgccacgt
tccaccatcacactcattcctctcaaatttcgcgaccctccagaacgcctacctcctccc
cccaagaagccttcccttctcacgccgtcccgtaaggctcctcagaatggcagagcagct
aaactgaggaggtactactccacacatgcggtgacccgccggagactcgctccgggtgtc
actggtctgcgcaatttggggaacacatgttacatgaactcaattttgcaagtgctgagc
cacctgcagaaattcagggagtgttttctcactttggacctgtgtgagactgaagagctg
ctggccaaggccaataactcccaggagatgacgggtgtgacgggaggagtcgtaagcagt
ggtaacgcagcgctgtcaggaggccctcttggacgcatggggaaaccagacagtttgatt
ttggctccgggcaaggaaagtgccccaccttccccacaggcttcggagttggtccagccc
aaggagcctcgctgctccacccgacagcaaatgtctctgtgccatgagttacatacgctt
ttcagggtcatgtggtccggccggtggtctttagtctctccgttcgccatgctgcactct
gtgtggaacctcatccctgctttccgtgggtacgaccagcaggacgcccaggagttcttg
tgtgagctgctggacaaggtgcagcaggagctggacacagaggggtccaagcgcaggata
gttatccccatcacaaagaggaaactatccaagcaagtgctgaaggttctcaacaccatc
tttcatgggcggctcctcagccaggtgacgtgtctgtcctgtaagcacaagtctaacaca
gtggagccattctgggatttgtctttggagtttcccgagcgataccacagcatcgacaaa
ggctcaggctccgcagcgtaccagcgcagctgcaccctcactgagatgctgtccaagttt
acggaaatggaggccctcgaaggcagcatctacgcctgcaaccactgcaacaaaagaaga
cggaaatcatcccacaaacccatagttctgtcagaggctcgtaagcagcttctgatctac
cgtttacctcaggttctacggctgcacctcaaacgtttcagatggtccgggcggaaccat
cgggagaaaatctgcgtccacgtggcctttgaacaggttctgaacatcaaaccgtactgc
tgctcaggctcaggccactcggtccacagaggaggctacacctacgacctgtctgccgtt
gtgatgcatcatggtaaaggcttcggctcagggcactacaccgcatactgctacaacaca
gaaggaggtttctgggtccactgtaatgactctgagatgaaggtttgcagtgtggaggaa
gtgtgcaacactcaggcctacatcctcttctatacccagaggtctgcctag
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