Pseudoliparis swirei (Mariana hadal snailfish): 130208223
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Entry
130208223 CDS
T09868
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00510
N-Glycan biosynthesis
pswi00513
Various types of N-glycan biosynthesis
pswi01100
Metabolic pathways
pswi04141
Protein processing in endoplasmic reticulum
Module
pswi_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
130208223 (rpn1)
00513 Various types of N-glycan biosynthesis
130208223 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130208223 (rpn1)
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Motif
Pfam:
Ribophorin_I
GTP-bdg_M
CT398_CC
Motif
Other DBs
NCBI-GeneID:
130208223
NCBI-ProteinID:
XP_056293203
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Position
18:26568604..26573753
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AA seq
603 aa
AA seq
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MTGTWSPLFAACLLLLAAGSAKVSAATDGLVNEDVKRTVDLGTHLAKITLEIVLSNQGHS
AVHSFILAVEPEMAPHLAYVGASVKGDEEEDGTLELQQTTIQGQSGLFYKVQLPSSLAAG
AQLKTKVEMTLSHVLRPFPTHITQTERQLVVFQGNHYLYSPYPTRSQTTRVRLASKTVET
YTKLGNPSKNDEIIEYGPFRDVAAFSEDTMKIHYENNSPFLTISNIIRTIEVSHWGNIAV
EETIDLRHTGAVLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSH
LQVLDDSVEVEVRPRFPLFGGWKTHYMIGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQV
IDSFTLKIILPEGARNIHMETPYKIDRLPNQLHYTYLDTFGRPVLIATKNNLVEHHIQDV
VVHYNFNRILMLQEPLLVVAAFYILFFTVIIYVRLDFAITKDPAAEVRMKVASITEQVLT
LVNKRLGLYRHMDEVVNRYKQSRDTGTLNSGRKTLEADHRALTNEISSLQSRLKAEGSDL
ADKTGEVQKLDGQVKELVCRSSQEAERLVAGKVKKEAYIESEKSLTAKRQELVSRIDSLL
DAL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgactggaacgtggtcgccacttttcgccgcgtgcctcctgctcctggctgcggggagc
gcgaaggtttcggcggcgacggacggtctggtgaacgaagacgtgaagaggacagtggac
ctgggcactcatctggccaaaatcaccttggagatcgtcttgtccaaccagggacactcg
gccgtccacagcttcatattggcggtggagcctgagatggccccgcacctggcgtacgtc
ggagcctcggtgaagggtgatgaagaggaggatgggacacttgaactccaacagacaaca
attcagggccaaagtggtttattttacaaagtgcagctgccctccagtctggcggcaggc
gctcagctgaaaacgaaggtggagatgacgttgagccacgtcctgaggcccttccccacc
cacatcacgcagactgagcgccagctggtggtcttccaggggaaccactacctgtactcc
ccttatcccactcgcagccagactacacgcgtccgcctggcctccaagactgtggagacc
tacaccaagctgggtaaccccagcaagaacgacgagatcatcgagtacggacctttccgt
gacgtggcggcgttcagcgaggatacaatgaagatccattacgaaaacaactcgcccttc
ctcaccatcagtaacatcattcggaccatcgaagtctctcactggggtaacatcgctgtg
gaagagaccatcgacctgaggcacacgggagcagtcctgaaggggcctttctcacgctac
gattatcagcgtcagtcagacagcggcatctcatctgtcaagtccttcaagactatcctt
cccgcctcggctcaggacgtctactacagagatgagattggaaacatctccacctcccat
ctgcaggttctggatgattcagtggaggtggaggtcaggcctcgcttccccttgttcgga
ggctggaagacccactacatgatcggctacaatctgcccagctacgagtacctctacacc
ctgggggaccagtatgcactgaagatgagactggttgaccatgtgtatgatgaccaggtg
atcgactccttcactcttaaaatcatcctcccagaaggagccagaaacatccacatggag
acgccgtacaagattgatcgcttgccaaaccagctgcattacacgtatctggatacgttt
ggccgaccagtgctgatcgccaccaagaacaacctggtggagcatcacattcaggatgtt
gtggttcattataacttcaaccggatcctgatgctgcaggagcctcttttggttgtcgcg
gccttctacatcctcttcttcaccgtcatcatctacgtccgcctggactttgccatcaca
aaggaccctgcagccgaggtgcgcatgaaggtggcctccatcaccgagcaagtgctgact
ctggtcaacaagcggctgggtctgtaccggcacatggacgaggtggtcaatcgctacaag
cagtcccgcgacaccgggacgctcaacagcggtcggaagaccctagaggccgaccaccgc
gccctcaccaacgagatcagctcgctgcagtcgcgcctcaaagcggagggctccgacttg
gccgataagaccggggaggtgcagaagctggacggccaggtgaaggagctggtgtgtcgc
tcctcccaggaggcggagcggctggtggcgggcaaggtgaagaaggaagcgtacatcgag
agcgagaagtctctgaccgccaagaggcaggagctcgtcagccgcatcgacagtctgctg
gacgccctctag
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