Pseudoliparis swirei (Mariana hadal snailfish): 130208229
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Entry
130208229 CDS
T09868
Name
(RefSeq) bactericidal permeability-increasing protein-like
KO
K25374
bactericidal permeability-increasing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99994 Others
130208229
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Gene cluster
GFIT
Motif
Pfam:
LBP_BPI_CETP_C
LBP_BPI_CETP
JHBP
T-box_assoc
Motif
Other DBs
NCBI-GeneID:
130208229
NCBI-ProteinID:
XP_056293212
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Position
18:complement(23442570..23449201)
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AA seq
473 aa
AA seq
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MFLCCWLALTALIPLTLSTNPGVKVKLTAKGLEYGRQLGMVSIQKKLKTIKVPDMSGRQR
VSPIGKVKYSLTNIRIVDVGLPTSALDLVPGTGVRLSITKAFISLHGNWRVKYLRIIKDS
GTFNLKVSDLTVTTSIAVKSDEMGRPVVSTADCVAKVGSVSVKFRGGASWLYNLFKKFIE
KALRNALDKQICTLVADAVTDLNPELKTLNVVAKVDKYAEIEYSMVSAPAVTKASIEFGL
KGEFYNIGKHQEPPFTAAAFSLPPETNKMLYLGLSAFTANSAAFVYNTAGALSLYITDDM
IPQGSPFRLSTRTFYIFIPQLARRFPGLMMKLLMRTAKNPFITLEPNNATVEASCTVTAY
AIQPNATLSPLFVLNMETSVSARVFVSGMRLAGAVKLNKMDLTLETSYVGDFAVRTLNSI
FQMVLKVVVIPTLNVQLAKGYPLPTLGKMKLVNTQLQVLKDYVLIGTDVQFTG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtgctgttggctggctctgacggctttaatccctttgaccctgagcaccaat
cctggagtgaaggtcaagctaaccgcaaaaggccttgaatatggcagacaactggggatg
gtttccatccagaagaaactcaaaaccatcaaagtcccagatatgtcagggcgccagaga
gtgtctcccattggcaaggtcaagtacagcttgacaaatatccgaatagtggatgtgggt
ttgccaacgtctgcgctggatctggtaccagggacgggtgtcaggctgtccatcactaag
gccttcatcagtctgcacggaaactggagggtcaagtacctcagaataataaaggacagc
ggcactttcaatttgaaggtcagcgatctcaccgtcacgacaagcattgccgtcaagagc
gacgagatgggccgtcccgtggtcagcaccgccgactgcgtggccaaagtcggcagcgtg
agcgtcaagttccgcggcggagccagctggctgtacaacctcttcaagaagttcatcgag
aaggccttacgaaatgcactggacaaacagatctgcactctggtggccgacgcagtaact
gatttgaaccctgagttgaaaactctcaatgttgtagcaaaggtggacaagtacgcagag
attgaatactccatggtgtcagcgcccgcagtgacaaaagcctcgatagaatttggcttg
aagggggaattctacaacatcgggaagcaccaggagcctccgtttaccgccgctgccttt
tctctgccgcccgagaccaacaaaatgttgtacctcggcttgtccgccttcaccgccaac
tctgcggccttcgtctacaacacagccggagccctcagcctgtacatcaccgatgacatg
atccctcaaggctcgcccttccgactcagcaccagaaccttctacatcttcatcccacag
ctcgccaggcgcttcccgggcctgatgatgaaactgctgatgaggacggcgaaaaacccc
ttcatcacgcttgaacccaacaacgccacggtggaggccagttgcacggtgacggcctac
gccatccaacccaacgccacgctctcccctctcttcgtcctgaacatggagaccagcgtc
agcgcccgggtgttcgtcagtggaatgaggttggctggagctgtcaagctgaacaaaatg
gatctgaccctggagacaagctacgtgggagattttgcggtcagaaccctcaacagcatc
ttccaaatggtcctcaaagtggttgtgatacctacactgaacgttcaacttgcaaaggga
tacccacttcctacacttggaaagatgaagcttgtgaacactcagcttcaggtcctgaag
gactacgtgctgattgggacagatgttcagttcacgggttga
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