Pseudoliparis swirei (Mariana hadal snailfish): 130208244
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Entry
130208244 CDS
T09868
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130208244 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130208244 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130208244 (gdf5)
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Transforming growth factors (RSTK binding)
130208244 (gdf5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
130208244
NCBI-ProteinID:
XP_056293238
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Position
18:787294..797931
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AA seq
360 aa
AA seq
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MLSLYWSLSRGAGNSSAGRDAAQANTVTSFVDRGQDERGPPLRRQRYHFNVSSLERDGLL
GAELRILRKRLSDPRGVSTGSAATDGGAGGISSARLKLYTCASGKQPAVPLQTKTAEDPL
GGFGGRWEVFDVWKIFKGFKNLPNQQNQQLCFDLEALEPRGGRPVDLRSLGFARAGRTTK
EKAFFLAFGKSKKRDLFYNEIKARSGHDNKTVYEYLFTQRRTRRAPAARGAKKPLQQHPP
PPQTLPQHQVAKMQTRPRCHRRRLHVNFKEMGWDDWIIAPLEYEAFHCDGVCDFPIRSHL
EPTNHAIIQTLMNSMDPESTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgctgtactggtccctgagccgcggggccggcaacagcagcgcggggcgcgac
gcggctcaggccaacaccgtcaccagcttcgtggacagaggacaagacgagcgtgggccg
ccgctccgacggcagcggtatcacttcaacgtcagctccctggagcgcgacgggctcctg
ggggccgagctgcgcatcctgaggaagcgcctgtccgacccccgcggggtctcgacgggg
tccgcggccaccgacggaggcgccggaggaatctcgtccgcgcgcctgaagctgtacacc
tgcgcttcggggaaacaaccggcggtcccactgcagacgaagaccgcggaggacccactc
ggcggattcggcggccgatgggaagtgttcgacgtgtggaagatcttcaagggattcaaa
aacctgccgaaccagcagaaccagcagctgtgcttcgacctcgaggccctggagccccgg
ggcggtcggcccgtggacctgcgctcactgggcttcgcccgagccggcaggaccaccaag
gaaaaggccttcttcctggcgttcggcaaaagcaagaagcgcgacctcttctacaacgag
attaaagcgcggtcgggccacgacaacaagaccgtctacgagtacctgttcacccagcgg
cgtacgcggcgagctcccgctgccaggggggccaagaaacctctgcagcagcatccgccg
ccaccgcagaccctcccccagcaccaggtggcgaagatgcagacgaggccgcggtgccac
cggagacgactccacgtgaacttcaaggagatgggctgggacgactggatcatcgcgccg
ctggagtacgaggccttccactgcgacggcgtctgcgacttccccatccgctcgcacctg
gagccgaccaaccacgccatcatacagaccctgatgaactcgatggacccggagtccacg
ccgcccacctgctgcgtcccgacccggctcagcccaatcagcatactctacatcgactcg
gccaacaacgtggtctacaagcagtacgaggacatggtggtggagtcgtgcggctgcagg
tag
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