Pseudoliparis swirei (Mariana hadal snailfish): 130208248
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Entry
130208248 CDS
T09868
Symbol
ptpra
Name
(RefSeq) receptor-type tyrosine-protein phosphatase alpha isoform X1
KO
K18032
receptor-type tyrosine-protein phosphatase A [EC:
3.1.3.48
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130208248 (ptpra)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130208248 (ptpra)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130208248 (ptpra)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
PTPlike_phytase
PTP-NADK
DUF1180
DUF3377
Motif
Other DBs
NCBI-GeneID:
130208248
NCBI-ProteinID:
XP_056293244
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Position
18:27974892..27997826
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AA seq
841 aa
AA seq
DB search
MPTSFLQGRMGACPLLLLLGLALGASAQDHVPTTSPPGVTDKPTEPPGAPTLDFTGPPTT
LAPTIISLTTTTNATTSPVGEEDVRPTGPDGAGRLLPVPAPSPPASSDAPQAPPPTEPPT
PPPPAPEGSGNETFATDAPPTPDYGDEGSEATMEPGMGITSDTTPHDNTQSDDMPIIAVM
VALSSLLVIIFIIIILYMLRFKKYKQAGSHSNSFRLINGRSDDTELQSVPLLARSPSTNR
KYPPLPVDKLEEEMNRRMADDNKLFREEFNSLPVCPIQASCDAASKEENKEKNRYVNILP
YDHSRVHLSSLEGVPDSDFINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATI
VMVTNLKERKECKCAQYWPDQGCWTYGNIRVSVEDTMVLVDYTIRKFCIQQVGDVSGKKP
QRLVTQFHFTSWPDFGVPFTPIGMLKFLKKVKNYNPQYAGAIVVHCSAGVGRTGTFIVID
AMLDMMNSERKVDVFGFVTRIRAQRCQMVQTDMQYVFIFQALLEHYLYGDTELEVTSLES
HLAKLYAPSPGAGCSGLEAEFKKLTSIKIQNDKMRTGNLPANMKKNRVLQIIPYEFNRVI
IPVKLGEENTDYVNASFIDGYRQKDSYMASQGPLQHTIEDFWRMIWEWRSCSIVMLTELE
ERGQEKCAQYWPGDGVALYGDVSVDIKREEESESYTVRDLLVTNNRENKARAVRQFHFHG
WPEVGIPADGRGMISLIAAVQKQQQQSGNHPITVHCSAGAGRTGSFCALSTVLERVKAEG
ILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVVQEYIDAFSDYANFNFRGSDVTHDWRSEY
L
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttcgtttcttcagggcagaatgggtgcgtgtcccctgctcctgctgctcggt
ctggccctcggggcctccgcccaggaccacgtccccaccacgagtcctccgggtgtcacg
gacaaaccgacagaaccccccggcgcacccaccctcgacttcacaggcccgcccacaaca
ctcgcccccacaatcatctcactgacaacaacaacaaacgcaacaacaagcccagtcggt
gaggaggacgtacggccgactggtcccgatggcgccgggcgcttgttaccggtccccgct
ccctcgcctccggcttccagtgacgcccctcaggctccgcctcccactgagccccccact
cctcctcctcccgcccccgagggctccggcaacgagaccttcgccacagacgcccccccg
acgccggattacggcgatgagggttcggaggccaccatggagccagggatggggatcacc
tcggacaccaccccccacgacaacacccagtcggatgacatgcccatcatcgcggtcatg
gtggccttgtcctcgctgctagtcatcatcttcatcatcatcatcctctacatgctcagg
ttcaagaagtacaagcaggcgggaagccactccaactccttcagactgatcaatggtaga
tctgacgatacagaactccagagcgtgccgctattggcccgctcgcccagcacaaacagg
aagtacccgccccttcccgtcgacaagctggaggaggaaatgaaccggcgcatggcggat
gacaacaagctcttcagggaggagtttaattcgctgccggtctgccccatccaggcttcg
tgcgacgccgcttccaaggaagagaataaagaaaagaatcgatacgtcaacatcctgcca
tacgatcactccagggtgcatctctcgtctctggagggagtcccagactctgacttcatc
aacgcctccttcattaatggttaccaggagaagaacaagttcattgcagctcaagggccg
aaggaggaaacggtgaacgacttctggcggatgatctgggagcagaacacggccaccatc
gtcatggtgaccaatctgaaggagagaaaagagtgtaagtgtgcgcagtactggccggac
cagggctgctggacctacgggaacatccgcgtgtcggtggaggacacgatggtgctggtg
gactacaccatccgcaagttctgcatccaacaggtgggcgacgtgtcggggaagaagcct
cagcggctcgtcacccagttccacttcaccagctggccggacttcggcgtgccgttcacg
cccatcggcatgctcaagttcctcaagaaggtcaagaactacaacccccagtacgccggg
gccatcgtggtccactgcagcgccggcgtgggcaggacgggcaccttcatcgtgatcgac
gccatgttggacatgatgaactcggagaggaaggtcgacgtgttcggcttcgtcacgagg
atccgagcgcagcgctgccagatggtccagaccgacatgcagtacgtgttcatcttccag
gcgctgctggagcattacctgtacggggacacggagctggaggtcacctctctggagtcg
cacctggccaagctctacgccccctcacctggagccggctgcagtgggctggaggccgag
ttcaagaagctgacgtccatcaagatccagaatgacaagatgagaacgggcaacctgccg
gccaacatgaagaagaaccgagtgctgcagatcattccatatgagttcaacagagtcatc
attccagtcaaactaggagaggagaacaccgactacgtcaacgcctccttcatcgacggc
taccggcagaaggactcctacatggcgagccagggcccgctgcagcacaccatcgaggac
ttctggaggatgatctgggagtggaggagctgctccatcgtcatgctgacggagctggag
gagagaggccaggagaagtgtgctcagtactggcccggtgacggcgtggcgctctacggc
gacgtctccgtggacatcaagcgggaggaggagagcgagagctacacggtgcgtgacctc
ctggtcaccaacaaccgggagaacaaggcccgcgccgtgcgtcagttccacttccacggc
tggcccgaggtcggcatcccggccgacggccgcgggatgatcagcctcatcgccgccgtg
cagaagcagcagcagcagtcagggaaccaccccatcaccgtgcactgcagtgctggtgct
ggccggacggggtctttctgcgccctgagtacggtcttggagcgcgtgaaggccgagggc
atcctggacgtgttccagaccgtgaagagcctccggctgcagaggccgcacatggtgcag
acgttggagcagtacgagttctgctacaaggtggtccaggagtacatcgacgccttctcc
gactacgccaacttcaatttcaggggttcagatgtcactcacgattggaggtcagagtat
ctgtga
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