Pseudoliparis swirei (Mariana hadal snailfish): 130208271
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Entry
130208271 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04010
MAPK signaling pathway
pswi04260
Cardiac muscle contraction
pswi04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130208271
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130208271
04261 Adrenergic signaling in cardiomyocytes
130208271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130208271
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130208271
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
VWA_CoxE
CENP-F_leu_zip
dCache_2
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
130208271
NCBI-ProteinID:
XP_056293275
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All DBs
Position
18:complement(14281633..14318865)
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AA seq
1116 aa
AA seq
DB search
MAIGKRSCSIVCLVSIQIILIFSASWPGAAALTFPQQYTIMHWARRIEQEIDRVFQHITG
AQQLKGIYNEERRRFSLVKNQPRKIVEKVASDIEKLLAKKRKALDRLASEAERLQREHQW
QDGIKELDMAYYDSKAELDYVSRRPDDXLYSMDGEGEVENPSHIKLEFVYDPNFKNNVNY
SYTAVQIPTDIYKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPAT
PWKAPDKIDLYDVRRRPWYIQGASSPKDMIILVDVSGSVSGLTLKLIKASVIEMLDTLSD
DDYVNVARFNEKAEAVVPCFKHLVQANVRNKKIFKDAVQQMQAKGTTDYKSGFHFAFNQL
LNKTNVPRANCNKIIMLFTDGGEDRAQDVFMQYNWPNKTVRVFTFSVGQHNYDVTPLQWI
ACTNKGYYFEIRSICAIRINTQEYLDVLGRPMVLAGSNAKQVQWTNVYQDALGLGMVVTG
TMPVFNLTMDGNSQNQLILGVMGVDVHLDEIKRLTPRYNLGANGYIFAIDPNGYLLLHPN
LQPKPVNLPEPVTLDFLDAEVEDSNKEEIRRQMIDGRPGEMQIKTLVKSIEEKYIDDVYR
SYTWTPINDTDYSLGLVLPPYNEYFIQADLSDVMLQLQCETDITLCLDTDMQSLLPSSFE
SSGHVFLAPREYCKRLNLSDNNTQFLQNFLSLMLDISPESDECDQGLIHNLILDSRIIGQ
LASRVWKNKDLNSYGFLAVFASTEGGITRVFPNIAAELWDEDPEPFNSNYYRRSLDNKGY
MFRAPSRSALDDPVGAENGTIGILVTSAVEVNIGGKLLKPSVVGVKLDLEAWVDKFKILA
SNMSDSQQGSHKCGPSRSCEMDCEVNTDDLLCYLIDDGGFLVMSNQRDHWKKIGLFFGDV
DPYLMHALYNNSIFNRLQSFHYQSACEPISSSHTGAATRGIFVPSIADILSLAWWTSTVA
WSVTQQLLYGLAYNSWLYQDDLLVEGFETRESSCVTIQSQFYFTNTTNSYNVLQDCGNCS
RLFHAKRIESTNLLFVVAETLPCSSCEIERLTQTKTEFQEENPCEVLSNARYRKGPTSCF
DSSALENTSECGRGCALQSSIGVLLFIQFTLPLFHL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggcgataggcaaaagatcttgcagcatcgtctgcttggtatctatccagattatcttg
attttcagcgcatcgtggcctggggcagcggctctcacgttcccacagcagtacacgata
atgcactgggccaggcgtatcgaacaggagattgacagagtctttcagcacatcactggc
gctcagcagttgaaagggatatacaatgaagaaagacgacggtttagtctggtgaagaat
cagcctcggaagatcgtcgagaaagtggcctcagatatagagaaactcctggctaagaag
cgcaaagcgcttgataggttagccagtgaagcagagcggctccagcgagagcatcaatgg
caggatggaatcaaggagctggacatggcttattatgactccaaggcagagctggactat
gtgagtaggagacctgacgactgattgtactctatggatggagaaggagaggtggaaaat
ccttcacacatcaagctggagtttgtttatgatccaaacttcaaaaataatgtcaactat
tcctacacagctgttcaaattcccaccgatatttataaaggagctccggtcattctgaat
gagttgaactggacgcaggcgctggagaaagtcttcatggagaacagtcaggaggatcca
tcactgctgtggcaagcgttcgggagtgctactggtgtcactcgctactacccagctaca
ccttggaaagctcccgataaaatcgatttgtatgacgtgaggaggagaccctggtacatc
cagggagcctcatccccaaaagatatgatcattcttgttgatgtgagcggcagtgtcagt
ggactcaccctgaagctcatcaaagcgtcggtgatagaaatgctggacactttgtctgat
gatgactatgtcaacgtggccaggttcaacgagaaggccgaggctgtggttccctgcttc
aaacatctcgtccaggctaatgtgcgcaacaaaaaaatcttcaaggatgcagtgcagcag
atgcaggctaaaggcaccactgactacaagtctggttttcattttgccttcaaccagctg
ttaaataagacaaatgttcctcgggcaaactgcaataaaataatcatgctgtttactgat
ggaggagaggatagagctcaggatgtcttcatgcaatacaactggcccaacaaaacggtt
cgagttttcaccttttctgtgggtcaacacaactatgatgttacacctttacagtggatc
gcatgcaccaataaaggttactattttgagatccggtccatctgtgctataaggattaac
acccaggagtacctcgacgtgctggggcgtcccatggtgctggcaggcagcaatgccaag
caggttcagtggaccaatgtgtaccaggatgctttgggtcttggaatggtagtaactggg
actatgcccgtctttaatctcaccatggatggaaactcacagaatcagctgatattaggt
gtcatgggagtggacgtgcatctagatgagataaagcgcctaacaccacggtacaatctt
ggagccaatggatacatatttgccattgatccaaatggatatcttctccttcatcctaac
cttcagccaaagccggtgaacctccctgagccggtgacgctggacttcctggatgcagag
gtggaggacagcaataaagaggagatccggcgacaaatgatagatggaagaccgggtgag
atgcagatcaaaactctagtcaagtcaatcgaagagaagtacattgacgacgtgtacagg
agttacacctggactcctatcaacgacacagattacagtctaggtctggtattacccccc
tacaatgaatacttcatccaggcagacctgagtgatgtgatgctgcagctccagtgtgaa
actgacatcaccctctgccttgatacagatatgcagtcgctcctgcccagctcctttgaa
tcctcaggacacgtgtttctggctcccagggaatattgcaaacgtctgaatctttctgac
aacaacacccagtttttgcagaacttcctctcgctcatgctcgacatttctccagaatct
gatgagtgtgaccaaggcctcatccacaacctgattttggattctaggataatcgggcag
ctggcctctcgtgtttggaagaacaaggacctgaattcgtacggcttcctggctgtattt
gcgtccactgaaggaggaataacacgtgtgttccccaacatagctgctgagttatgggat
gaggatcccgaacccttcaattctaattattatagacggagcctcgacaacaaaggctac
atgttcagagctccatccagatccgcgttggatgaccctgttggtgcagagaatggcact
attgggattctggtgacttcggccgtggaggttaatataggaggcaaactgctcaaacct
tcagtggtcggagtgaagctggacttggaggcgtgggtggacaagtttaagatcctggcc
agcaacatgtcagacagtcaacagggctcacacaagtgtggaccttccagaagctgtgag
atggactgtgaagtgaatactgacgacctcctctgttatctcattgatgacggtggtttc
ctggttatgtcaaatcaaagagatcattggaaaaagatcggtcttttctttggtgatgtt
gacccttacctgatgcatgctctctacaacaactccatcttcaatcgacttcagtctttc
cactaccagtctgcatgtgaaccaatcagcagcagccatactggtgcagcaacaaggggc
atctttgtgccctccattgctgacatccttagcttggcctggtggacatccacggtggca
tggtctgtgacccagcagctgctttatggactcgcctacaacagctggctctaccaagat
gatctcctggttgaaggttttgaaacaagggaaagcagctgcgtgaccatccaaagccag
ttctacttcacaaacaccacaaactcctacaacgtgctgcaggactgtggaaactgctca
cggcttttccacgctaagcggatagaaagtaccaacctcctctttgtggtggctgagacg
ctcccctgcagctcatgtgagatagagagattgacgcagaccaagacagagtttcaggag
gagaatccatgcgaagtactgagcaacgcacgatatcgtaaaggcccgacatcctgcttt
gactccagtgccttagaaaacacgtctgagtgtggacgaggttgtgcactgcaatcctct
attggagtccttctctttattcagtttactctccctctttttcatctctga
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